Wall clock time and date at job start Sun Mar 7 2021 08:23:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53005 * 109.47296 * 2 1 4 4 C 1.53001 * 109.47392 * 239.99684 * 2 1 3 5 5 O 1.45202 * 109.46985 * 119.99481 * 2 1 3 6 6 C 1.34636 * 116.99843 * 60.00379 * 5 2 1 7 7 O 1.21513 * 120.00245 * 359.97438 * 6 5 2 8 8 N 1.34778 * 120.00435 * 179.97438 * 6 5 2 9 9 C 1.46500 * 120.00535 * 179.97438 * 8 6 5 10 10 H 1.09003 * 112.84886 * 23.80295 * 9 8 6 11 11 C 1.53776 * 113.61371 * 154.99976 * 9 8 6 12 12 C 1.53777 * 87.07989 * 89.11746 * 11 9 8 13 13 F 1.39895 * 113.61485 * 270.79856 * 12 11 9 14 14 C 1.53007 * 113.61327 * 139.98127 * 12 11 9 15 15 N 1.46505 * 109.47043 * 181.53032 * 14 12 11 16 16 C 1.34771 * 119.99985 * 179.97438 * 15 14 12 17 17 O 1.21519 * 120.00041 * 0.02562 * 16 15 14 18 18 C 1.48165 * 119.99972 * 179.97438 * 16 15 14 19 19 N 1.32717 * 119.72716 * 0.02562 * 18 16 15 20 20 C 1.31520 * 121.64619 * 179.97438 * 19 18 16 21 21 C 1.38559 * 120.90142 * 0.27819 * 20 19 18 22 22 C 1.50701 * 120.31948 * 179.70076 * 21 20 19 23 23 O 1.42896 * 109.47011 * 119.99968 * 22 21 20 24 24 Si 1.86291 * 109.47329 * 359.97438 * 22 21 20 25 25 C 1.38624 * 119.35263 * 359.42621 * 21 20 19 26 26 C 1.38592 * 118.48658 * 0.56067 * 25 21 20 27 27 C 1.53775 * 87.17228 * 25.39021 * 12 11 9 28 28 H 1.09002 * 109.47181 * 300.00636 * 1 2 3 29 29 H 1.09004 * 109.46874 * 59.99816 * 1 2 3 30 30 H 1.08999 * 109.47410 * 180.02562 * 1 2 3 31 31 H 1.09000 * 109.46818 * 179.97438 * 3 2 1 32 32 H 1.09003 * 109.46573 * 299.99818 * 3 2 1 33 33 H 1.08997 * 109.47186 * 59.99889 * 3 2 1 34 34 H 1.08999 * 109.46951 * 300.00413 * 4 2 1 35 35 H 1.08997 * 109.46813 * 59.99517 * 4 2 1 36 36 H 1.08997 * 109.47264 * 180.02562 * 4 2 1 37 37 H 0.97001 * 119.99389 * 359.97438 * 8 6 5 38 38 H 1.08997 * 113.61522 * 334.56508 * 11 9 8 39 39 H 1.09003 * 113.61220 * 203.66721 * 11 9 8 40 40 H 1.08994 * 109.47294 * 61.52330 * 14 12 11 41 41 H 1.09002 * 109.46665 * 301.52744 * 14 12 11 42 42 H 0.96998 * 119.99504 * 0.02562 * 15 14 12 43 43 H 1.08002 * 119.54502 * 179.97438 * 20 19 18 44 44 H 1.09008 * 109.46986 * 239.99678 * 22 21 20 45 45 H 0.96695 * 114.00264 * 299.99179 * 23 22 21 46 46 H 1.48506 * 109.99986 * 180.02562 * 24 22 21 47 47 H 1.48503 * 110.00414 * 301.31746 * 24 22 21 48 48 H 1.07999 * 120.75624 * 180.28240 * 25 21 20 49 49 H 1.08004 * 120.46837 * 179.75388 * 26 25 21 50 50 H 1.08998 * 113.61797 * 89.16256 * 27 12 11 51 51 H 1.09004 * 113.61555 * 220.05760 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6844 1.1856 6 6 1.6522 -1.9722 1.3385 7 8 0.9509 -2.5094 0.5041 8 7 2.0679 -2.6656 2.4168 9 6 1.6739 -4.0668 2.5834 10 1 1.4207 -4.5503 1.6398 11 6 2.6473 -4.8814 3.4514 12 6 1.8074 -4.4456 4.6636 13 9 2.2317 -3.2415 5.2356 14 6 1.6020 -5.5547 5.6975 15 7 0.7637 -5.0546 6.7900 16 6 0.4476 -5.8629 7.8210 17 8 0.8582 -7.0064 7.8447 18 6 -0.3998 -5.3570 8.9262 19 7 -0.8449 -4.1071 8.8950 20 6 -1.5997 -3.6193 9.8553 21 6 -1.9554 -4.3971 10.9454 22 6 -2.8153 -3.8227 12.0416 23 8 -4.0199 -4.5837 12.1503 24 14 -3.2328 -2.0521 11.6401 25 6 -1.5173 -5.7104 11.0150 26 6 -0.7234 -6.1977 9.9888 27 6 0.6272 -4.2835 3.6913 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 3.1300 1.4424 0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6767 1.9564 0.8899 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2076 -2.1392 36 1 3.1300 -0.7217 -1.2489 37 1 2.6281 -2.2369 3.0826 38 1 3.6626 -4.4850 3.4584 39 1 2.6119 -5.9536 3.2583 40 1 2.5685 -5.8653 6.0940 41 1 1.1127 -6.4061 5.2245 42 1 0.4356 -4.1420 6.7708 43 1 -1.9428 -2.5970 9.7956 44 1 -2.2738 -3.8626 12.9869 45 1 -4.5537 -4.5925 11.3441 46 1 -4.0801 -1.4739 12.7140 47 1 -1.9870 -1.2571 11.4935 48 1 -1.7848 -6.3383 11.8521 49 1 -0.3610 -7.2149 10.0125 50 1 0.0383 -5.1919 3.5640 51 1 0.0138 -3.4050 3.8917 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_13287726.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:23:46 Heat of formation + Delta-G solvation = -127.096009 kcal Electronic energy + Delta-G solvation = -35152.899774 eV Core-core repulsion = 30162.686867 eV Total energy + Delta-G solvation = -4990.212906 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.178 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -48.91441 -41.92016 -41.86864 -40.42726 -39.80621 -37.92431 -37.84402 -36.05152 -35.27233 -34.05834 -33.61552 -33.00736 -29.57284 -28.37353 -28.31447 -27.48666 -27.05886 -25.06366 -24.76168 -23.69551 -22.93769 -21.89499 -21.19990 -20.70058 -19.58725 -19.25057 -18.61798 -17.88898 -17.67368 -17.27048 -17.18719 -16.94734 -16.84715 -16.63767 -16.46410 -16.20672 -16.15509 -15.91414 -15.63250 -15.52496 -15.37511 -14.89619 -14.80907 -14.50881 -14.39275 -14.30983 -14.23443 -13.76088 -13.65469 -13.54488 -13.35335 -13.16160 -13.09472 -12.92173 -12.88217 -12.79565 -12.55535 -12.45827 -12.32473 -12.19286 -11.79706 -11.44807 -11.41345 -11.35374 -11.14842 -11.08703 -10.70163 -10.61908 -10.40334 -10.27624 -10.14251 -5.01771 -0.62422 0.06091 1.09344 1.23535 1.49402 1.62167 1.68091 1.84148 1.96131 2.64036 2.87462 2.99453 3.03989 3.11461 3.21535 3.41345 3.49613 3.56544 3.61886 3.67785 3.72988 3.78045 3.78821 3.93331 3.93942 4.11354 4.30275 4.36080 4.40225 4.48063 4.55065 4.57269 4.60803 4.61384 4.62591 4.75752 4.78349 4.82102 4.84231 4.86603 4.87356 4.88333 4.90591 4.97122 5.12071 5.18076 5.26488 5.29260 5.36581 5.40669 5.57031 6.17261 6.31234 6.55497 6.70708 6.94706 7.28187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.648 3.352 7 O -0.588 6.588 8 N -0.688 5.688 9 C 0.130 3.870 10 H 0.114 0.886 11 C -0.140 4.140 12 C 0.080 3.920 13 F -0.195 7.195 14 C 0.109 3.891 15 N -0.701 5.701 16 C 0.571 3.429 17 O -0.561 6.561 18 C 0.061 3.939 19 N -0.462 5.462 20 C 0.100 3.900 21 C -0.141 4.141 22 C -0.067 4.067 23 O -0.550 6.550 24 Si 0.771 3.229 25 C -0.053 4.053 26 C -0.113 4.113 27 C -0.161 4.161 28 H 0.061 0.939 29 H 0.087 0.913 30 H 0.065 0.935 31 H 0.068 0.932 32 H 0.099 0.901 33 H 0.068 0.932 34 H 0.065 0.935 35 H 0.087 0.913 36 H 0.061 0.939 37 H 0.414 0.586 38 H 0.097 0.903 39 H 0.148 0.852 40 H 0.080 0.920 41 H 0.107 0.893 42 H 0.418 0.582 43 H 0.185 0.815 44 H 0.120 0.880 45 H 0.398 0.602 46 H -0.295 1.295 47 H -0.280 1.280 48 H 0.162 0.838 49 H 0.151 0.849 50 H 0.133 0.867 51 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.677 2.102 -1.118 2.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.402 3.598 7 O -0.479 6.479 8 N -0.347 5.347 9 C 0.026 3.974 10 H 0.132 0.868 11 C -0.179 4.179 12 C 0.062 3.938 13 F -0.175 7.175 14 C -0.014 4.014 15 N -0.352 5.352 16 C 0.357 3.643 17 O -0.440 6.440 18 C -0.076 4.076 19 N -0.173 5.173 20 C -0.060 4.060 21 C -0.144 4.144 22 C -0.178 4.178 23 O -0.358 6.358 24 Si 0.677 3.323 25 C -0.078 4.078 26 C -0.134 4.134 27 C -0.200 4.200 28 H 0.080 0.920 29 H 0.106 0.894 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.118 0.882 33 H 0.087 0.913 34 H 0.084 0.916 35 H 0.106 0.894 36 H 0.080 0.920 37 H 0.251 0.749 38 H 0.116 0.884 39 H 0.166 0.834 40 H 0.099 0.901 41 H 0.125 0.875 42 H 0.255 0.745 43 H 0.201 0.799 44 H 0.138 0.862 45 H 0.248 0.752 46 H -0.223 1.223 47 H -0.206 1.206 48 H 0.179 0.821 49 H 0.169 0.831 50 H 0.151 0.849 51 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -1.159 2.381 -1.492 3.040 hybrid contribution 0.351 -0.190 1.479 1.532 sum -0.808 2.191 -0.013 2.335 Atomic orbital electron populations 1.22473 0.93905 1.03797 1.03518 1.22375 0.94564 0.92532 0.81458 1.21901 1.02434 0.90978 1.04248 1.22474 1.01618 1.02329 0.97276 1.86322 1.71572 1.23292 1.47390 1.18264 0.78545 0.80791 0.82224 1.90905 1.41953 1.70822 1.44224 1.44472 1.54926 1.12108 1.23185 1.21929 0.95992 0.79347 1.00122 0.86820 1.24007 0.99419 1.03875 0.90590 1.22272 0.98360 0.81056 0.92159 1.92855 1.91056 1.47329 1.86270 1.21985 0.96362 0.96332 0.86726 1.45664 1.51511 1.16905 1.21155 1.18017 0.79684 0.84729 0.81884 1.90800 1.55173 1.19104 1.78920 1.21079 0.99397 0.91287 0.95827 1.67502 1.09334 1.12498 1.27955 1.22992 0.93802 1.00492 0.88711 1.21768 0.99320 0.95648 0.97642 1.25130 0.86584 1.07276 0.98823 1.86505 1.32914 1.74048 1.42322 0.93778 0.80743 0.71561 0.86257 1.21733 0.92893 0.95114 0.98098 1.22291 0.96499 1.01735 0.92870 1.24240 0.96599 1.05425 0.93706 0.92023 0.89395 0.91606 0.91255 0.88208 0.91275 0.91596 0.89405 0.91994 0.74922 0.88400 0.83440 0.90146 0.87528 0.74472 0.79912 0.86243 0.75209 1.22287 1.20642 0.82059 0.83091 0.84899 0.90312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 2 C 0.13 0.35 1.13 -10.79 -0.01 0.34 16 3 C -0.14 0.27 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.49 8.37 71.98 0.60 0.11 16 5 O -0.37 -2.14 9.94 -55.45 -0.55 -2.69 16 6 C 0.65 4.10 8.06 129.79 1.05 5.15 16 7 O -0.59 -6.28 11.48 19.80 0.23 -6.05 16 8 N -0.69 -0.43 5.19 -567.34 -2.94 -3.37 16 9 C 0.13 -0.42 4.33 45.57 0.20 -0.23 16 10 H 0.11 -0.18 7.46 -2.39 -0.02 -0.20 16 11 C -0.14 1.09 7.28 31.12 0.23 1.32 16 12 C 0.08 -0.38 1.63 -10.27 -0.02 -0.40 16 13 F -0.19 0.04 15.78 44.97 0.71 0.75 16 14 C 0.11 -0.31 5.35 86.38 0.46 0.15 16 15 N -0.70 -0.68 5.46 -465.65 -2.54 -3.23 16 16 C 0.57 3.32 7.81 86.88 0.68 4.00 16 17 O -0.56 -6.36 16.32 -3.77 -0.06 -6.42 16 18 C 0.06 0.24 6.75 41.91 0.28 0.52 16 19 N -0.46 -0.85 9.54 -184.92 -1.76 -2.62 16 20 C 0.10 -0.23 9.84 84.82 0.83 0.61 16 21 C -0.14 0.45 5.41 -19.70 -0.11 0.35 16 22 C -0.07 0.33 2.83 71.24 0.20 0.54 16 23 O -0.55 2.28 12.77 -148.98 -1.90 0.38 16 24 Si 0.77 -4.50 29.82 68.60 2.05 -2.46 16 25 C -0.05 0.10 9.76 22.45 0.22 0.32 16 26 C -0.11 -0.19 9.63 22.61 0.22 0.03 16 27 C -0.16 0.80 7.34 31.17 0.23 1.03 16 28 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 29 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 30 H 0.07 0.51 5.88 -2.39 -0.01 0.49 16 31 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 32 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 33 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 34 H 0.07 0.50 5.88 -2.39 -0.01 0.49 16 35 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 36 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 37 H 0.41 -0.48 7.89 -92.71 -0.73 -1.21 16 38 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 39 H 0.15 -1.83 8.10 -2.39 -0.02 -1.85 16 40 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 41 H 0.11 -0.53 7.98 -2.39 -0.02 -0.55 16 42 H 0.42 -0.01 7.56 -92.71 -0.70 -0.71 16 43 H 0.18 -1.34 4.89 -2.91 -0.01 -1.35 16 44 H 0.12 -0.53 7.96 -2.38 -0.02 -0.55 16 45 H 0.40 -4.74 8.70 -74.06 -0.64 -5.39 16 46 H -0.30 -0.62 7.11 99.48 0.71 0.09 16 47 H -0.28 0.33 7.11 99.48 0.71 1.04 16 48 H 0.16 -0.78 8.06 -2.91 -0.02 -0.80 16 49 H 0.15 0.22 7.64 -2.91 -0.02 0.20 16 50 H 0.13 -1.10 7.99 -2.39 -0.02 -1.12 16 51 H 0.08 -0.16 8.14 -2.38 -0.02 -0.18 16 Total: 0.00 -22.67 420.67 -1.52 -24.19 By element: Atomic # 1 Polarization: -12.28 SS G_CDS: -1.04 Total: -13.32 kcal Atomic # 6 Polarization: 8.53 SS G_CDS: 6.30 Total: 14.83 kcal Atomic # 7 Polarization: -1.96 SS G_CDS: -7.25 Total: -9.21 kcal Atomic # 8 Polarization: -12.49 SS G_CDS: -2.29 Total: -14.78 kcal Atomic # 9 Polarization: 0.04 SS G_CDS: 0.71 Total: 0.75 kcal Atomic # 14 Polarization: -4.50 SS G_CDS: 2.05 Total: -2.46 kcal Total: -22.67 -1.52 -24.19 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13287726.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.901 kcal (2) G-P(sol) polarization free energy of solvation -22.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.096 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds