Wall clock time and date at job start Sun Mar 7 2021 08:23:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34663 * 124.85562 * 2 1 4 4 C 1.36766 * 108.39825 * 179.97438 * 3 2 1 5 5 C 1.47268 * 126.94288 * 179.97438 * 4 3 2 6 6 O 1.21626 * 120.00180 * 180.02562 * 5 4 3 7 7 N 1.34772 * 119.99568 * 0.04375 * 5 4 3 8 8 C 1.46499 * 119.99776 * 179.97438 * 7 5 4 9 9 C 1.53005 * 109.47300 * 179.97438 * 8 7 5 10 10 F 1.39891 * 112.84857 * 314.67213 * 9 8 7 11 11 C 1.53778 * 113.61025 * 85.86498 * 9 8 7 12 12 C 1.53952 * 87.01843 * 139.95243 * 11 9 8 13 13 H 1.09004 * 113.66671 * 220.06019 * 12 11 9 14 14 N 1.46501 * 113.61479 * 89.20052 * 12 11 9 15 15 C 1.34779 * 120.00347 * 107.46494 * 14 12 11 16 16 O 1.21506 * 119.99879 * 359.97438 * 15 14 12 17 17 O 1.34638 * 119.99807 * 180.02562 * 15 14 12 18 18 C 1.45200 * 116.99692 * 179.97438 * 17 15 14 19 19 C 1.53009 * 109.46907 * 59.99933 * 18 17 15 20 20 C 1.52999 * 109.47054 * 179.97438 * 18 17 15 21 21 C 1.52996 * 109.47330 * 300.00433 * 18 17 15 22 22 C 1.53778 * 87.11199 * 334.63608 * 12 11 9 23 23 C 1.46692 * 106.11657 * 0.02562 * 4 3 2 24 24 C 1.34482 * 106.33230 * 0.26281 * 23 4 3 25 25 C 1.50702 * 125.57233 * 179.73667 * 24 23 4 26 26 O 1.42898 * 109.46976 * 210.01962 * 25 24 23 27 27 Si 1.86290 * 109.46963 * 330.02413 * 25 24 23 28 28 H 1.08997 * 109.47427 * 90.01798 * 1 2 3 29 29 H 1.08991 * 109.47450 * 210.02596 * 1 2 3 30 30 H 1.09003 * 109.46622 * 330.02315 * 1 2 3 31 31 H 1.08000 * 125.80046 * 359.96945 * 3 2 1 32 32 H 0.97004 * 120.00470 * 359.97438 * 7 5 4 33 33 H 1.08996 * 109.47282 * 299.99960 * 8 7 5 34 34 H 1.08999 * 109.47077 * 60.00032 * 8 7 5 35 35 H 1.09007 * 113.61439 * 254.53072 * 11 9 8 36 36 H 1.08998 * 113.62119 * 25.43475 * 11 9 8 37 37 H 0.96999 * 119.99772 * 287.47024 * 14 12 11 38 38 H 1.08997 * 109.46876 * 60.00364 * 19 18 17 39 39 H 1.09004 * 109.46744 * 180.02562 * 19 18 17 40 40 H 1.08998 * 109.47019 * 299.99615 * 19 18 17 41 41 H 1.09001 * 109.47065 * 60.00368 * 20 18 17 42 42 H 1.09004 * 109.47126 * 179.97438 * 20 18 17 43 43 H 1.08998 * 109.47161 * 300.00328 * 20 18 17 44 44 H 1.08998 * 109.47792 * 59.99653 * 21 18 17 45 45 H 1.09004 * 109.47421 * 180.02562 * 21 18 17 46 46 H 1.09001 * 109.46848 * 299.99667 * 21 18 17 47 47 H 1.09003 * 113.61031 * 270.81367 * 22 12 11 48 48 H 1.08994 * 113.69056 * 139.92099 * 22 12 11 49 49 H 1.08002 * 126.83095 * 179.97438 * 23 4 3 50 50 H 1.08996 * 109.46706 * 90.02231 * 25 24 23 51 51 H 0.96702 * 113.99795 * 60.00688 * 26 25 24 52 52 H 1.48501 * 110.00379 * 58.68230 * 27 25 24 53 53 H 1.48508 * 109.99921 * 180.02562 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2346 1.1050 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7285 1.5956 0.0003 6 8 5.8447 1.1126 0.0004 7 7 4.5735 2.9344 0.0002 8 6 5.7496 3.8079 0.0005 9 6 5.2990 5.2701 -0.0003 10 9 4.2733 5.5219 -0.9177 11 6 5.0198 5.8293 1.4047 12 6 5.6923 7.1312 0.9326 13 1 6.3308 7.5921 1.6862 14 7 4.7632 8.0814 0.3159 15 6 4.4091 9.2022 0.9753 16 8 4.8601 9.4244 2.0815 17 8 3.5549 10.0752 0.4087 18 6 3.2177 11.2604 1.1768 19 6 4.4900 12.0593 1.4667 20 6 2.2433 12.1267 0.3763 21 6 2.5651 10.8442 2.4966 22 6 6.4616 6.2729 -0.0854 23 6 3.5375 -0.7493 0.0003 24 6 2.2447 -1.1198 -0.0063 25 6 1.7397 -2.5397 -0.0147 26 8 0.4836 -2.5944 -0.6938 27 14 2.9684 -3.6305 -0.8926 28 1 -0.3634 -0.0003 -1.0276 29 1 -0.3634 -0.8897 0.5142 30 1 -0.3633 0.8902 0.5135 31 1 1.8768 2.1241 -0.0005 32 1 3.6832 3.3197 0.0000 33 1 6.3474 3.6121 0.8905 34 1 6.3478 3.6120 -0.8894 35 1 3.9585 5.9408 1.6274 36 1 5.5676 5.3168 2.1955 37 1 4.4029 7.9038 -0.5670 38 1 4.9549 12.3558 0.5265 39 1 4.2369 12.9488 2.0437 40 1 5.1845 11.4423 2.0369 41 1 1.3369 11.5578 0.1694 42 1 1.9898 13.0162 0.9531 43 1 2.7087 12.4232 -0.5638 44 1 3.2596 10.2272 3.0667 45 1 2.3116 11.7339 3.0730 46 1 1.6588 10.2751 2.2901 47 1 7.4044 5.8820 0.2972 48 1 6.5637 6.7410 -1.0644 49 1 4.3981 -1.4019 0.0002 50 1 1.6137 -2.8865 1.0109 51 1 0.5208 -2.2994 -1.6140 52 1 4.2876 -3.5577 -0.2146 53 1 2.4817 -5.0335 -0.9082 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_13287730.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:23:50 Heat of formation + Delta-G solvation = -115.844168 kcal Electronic energy + Delta-G solvation = -35939.973147 eV Core-core repulsion = 30922.936679 eV Total energy + Delta-G solvation = -5017.036468 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -48.90094 -42.47229 -41.89351 -40.40345 -39.75656 -37.87553 -37.72923 -35.87697 -35.24364 -33.94578 -33.68229 -31.60976 -29.24796 -28.37969 -28.31523 -27.36523 -27.06580 -26.20750 -24.71855 -23.53627 -22.84049 -21.24763 -21.16578 -20.71610 -20.36901 -19.42943 -19.11028 -17.68871 -17.53451 -17.31277 -17.19870 -17.10548 -16.95669 -16.76452 -16.41308 -16.29334 -15.86133 -15.54879 -15.52380 -15.46288 -15.37739 -15.33232 -14.78529 -14.56451 -14.52960 -14.41882 -14.08994 -13.76784 -13.66767 -13.43220 -13.35262 -13.24681 -13.16557 -13.08075 -13.06524 -12.92374 -12.88409 -12.78928 -12.45627 -12.32852 -12.21349 -12.09239 -11.67550 -11.41656 -11.36293 -11.15394 -11.05246 -10.75302 -10.29497 -10.20728 -9.60394 -9.23830 -4.99333 0.70441 1.02489 1.08698 1.38555 1.62909 1.68138 1.87725 2.02024 2.18251 2.51279 3.00234 3.03936 3.10454 3.24934 3.34224 3.54845 3.56893 3.67294 3.72687 3.78386 3.85038 3.92992 3.94309 4.28058 4.35417 4.36736 4.38930 4.43343 4.49273 4.52554 4.60197 4.60959 4.61683 4.64819 4.75391 4.78370 4.79541 4.82248 4.86418 4.86666 4.88825 4.89910 4.91278 4.95338 5.12610 5.25873 5.28272 5.34214 5.41387 5.57149 5.60710 5.94543 6.21353 6.31742 6.53197 6.62018 7.26175 7.28324 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.421 5.421 3 C 0.075 3.925 4 C -0.261 4.261 5 C 0.590 3.410 6 O -0.593 6.593 7 N -0.717 5.717 8 C 0.114 3.886 9 C 0.086 3.914 10 F -0.191 7.191 11 C -0.160 4.160 12 C 0.130 3.870 13 H 0.111 0.889 14 N -0.686 5.686 15 C 0.648 3.352 16 O -0.590 6.590 17 O -0.370 6.370 18 C 0.127 3.873 19 C -0.180 4.180 20 C -0.138 4.138 21 C -0.180 4.180 22 C -0.144 4.144 23 C -0.166 4.166 24 C -0.014 4.014 25 C -0.035 4.035 26 O -0.547 6.547 27 Si 0.784 3.216 28 H 0.097 0.903 29 H 0.092 0.908 30 H 0.100 0.900 31 H 0.205 0.795 32 H 0.411 0.589 33 H 0.094 0.906 34 H 0.074 0.926 35 H 0.081 0.919 36 H 0.129 0.871 37 H 0.415 0.585 38 H 0.061 0.939 39 H 0.087 0.913 40 H 0.064 0.936 41 H 0.069 0.931 42 H 0.099 0.901 43 H 0.069 0.931 44 H 0.064 0.936 45 H 0.087 0.913 46 H 0.061 0.939 47 H 0.143 0.857 48 H 0.098 0.902 49 H 0.133 0.867 50 H 0.115 0.885 51 H 0.396 0.604 52 H -0.298 1.298 53 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.120 3.354 -3.279 7.711 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.095 5.095 3 C -0.063 4.063 4 C -0.271 4.271 5 C 0.380 3.620 6 O -0.475 6.475 7 N -0.369 5.369 8 C -0.010 4.010 9 C 0.067 3.933 10 F -0.171 7.171 11 C -0.199 4.199 12 C 0.026 3.974 13 H 0.129 0.871 14 N -0.345 5.345 15 C 0.402 3.598 16 O -0.480 6.480 17 O -0.284 6.284 18 C 0.091 3.909 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.182 4.182 23 C -0.190 4.190 24 C -0.123 4.123 25 C -0.146 4.146 26 O -0.354 6.354 27 Si 0.690 3.310 28 H 0.115 0.885 29 H 0.111 0.889 30 H 0.118 0.882 31 H 0.222 0.778 32 H 0.248 0.752 33 H 0.112 0.888 34 H 0.093 0.907 35 H 0.100 0.900 36 H 0.147 0.853 37 H 0.252 0.748 38 H 0.080 0.920 39 H 0.105 0.895 40 H 0.083 0.917 41 H 0.088 0.912 42 H 0.117 0.883 43 H 0.088 0.912 44 H 0.083 0.917 45 H 0.105 0.895 46 H 0.080 0.920 47 H 0.161 0.839 48 H 0.117 0.883 49 H 0.151 0.849 50 H 0.132 0.868 51 H 0.246 0.754 52 H -0.225 1.225 53 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -5.250 2.300 -2.134 6.116 hybrid contribution -0.473 0.289 0.283 0.622 sum -5.723 2.588 -1.851 6.548 Atomic orbital electron populations 1.22491 0.74137 1.05708 1.05467 1.43722 1.08174 1.04346 1.53258 1.22350 0.88961 0.93160 1.01801 1.20280 0.92339 0.93680 1.20802 1.17630 0.87853 0.81905 0.74574 1.90759 1.27655 1.76126 1.52914 1.45531 1.10528 1.04969 1.75824 1.21818 0.88582 0.86351 1.04261 1.22188 0.87653 0.94147 0.89264 1.92841 1.60960 1.95058 1.68283 1.24238 1.03749 0.95872 0.96050 1.21911 0.90691 0.88066 0.96744 0.87110 1.44442 1.48922 1.19287 1.21887 1.18271 0.78049 0.80775 0.82751 1.90908 1.58979 1.77495 1.20664 1.86320 1.59609 1.33113 1.49379 1.22372 0.95917 0.81178 0.91461 1.22480 0.97375 1.01084 1.02806 1.21895 0.97902 0.99010 1.00704 1.22469 1.01009 1.03529 0.96666 1.24007 0.98411 0.94169 1.01618 1.21724 0.95502 0.93700 1.08098 1.20823 0.90074 0.89976 1.11473 1.24679 0.93958 0.93957 1.01971 1.86455 1.28989 1.89370 1.30591 0.93231 0.73577 0.75393 0.88830 0.88485 0.88885 0.88182 0.77800 0.75206 0.88753 0.90722 0.90010 0.85286 0.74806 0.91955 0.89455 0.91673 0.91187 0.88279 0.91210 0.91685 0.89463 0.91950 0.83909 0.88325 0.84893 0.86771 0.75383 1.22490 1.21173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.58 9.80 127.77 1.25 0.67 16 2 N -0.42 1.33 3.09 -533.26 -1.65 -0.31 16 3 C 0.07 -0.20 10.83 83.91 0.91 0.70 16 4 C -0.26 -1.28 6.29 -19.04 -0.12 -1.40 16 5 C 0.59 4.65 7.81 86.62 0.68 5.33 16 6 O -0.59 -10.06 16.97 -4.11 -0.07 -10.13 16 7 N -0.72 0.00 5.44 -466.53 -2.54 -2.54 16 8 C 0.11 -0.24 5.40 86.38 0.47 0.23 16 9 C 0.09 -0.46 1.71 -10.27 -0.02 -0.48 16 10 F -0.19 0.50 15.57 44.97 0.70 1.20 16 11 C -0.16 0.87 7.34 31.18 0.23 1.10 16 12 C 0.13 -0.44 4.33 45.57 0.20 -0.25 16 13 H 0.11 -0.13 7.46 -2.38 -0.02 -0.15 16 14 N -0.69 0.12 5.19 -567.32 -2.94 -2.82 16 15 C 0.65 3.70 8.06 129.79 1.05 4.75 16 16 O -0.59 -6.18 11.48 19.82 0.23 -5.95 16 17 O -0.37 -1.82 9.94 -55.47 -0.55 -2.37 16 18 C 0.13 0.28 1.13 -10.79 -0.01 0.27 16 19 C -0.18 -0.45 8.37 71.99 0.60 0.16 16 20 C -0.14 0.36 8.85 71.98 0.64 1.00 16 21 C -0.18 -0.42 8.37 71.98 0.60 0.19 16 22 C -0.14 1.08 7.28 31.12 0.23 1.31 16 23 C -0.17 -1.04 9.49 23.62 0.22 -0.81 16 24 C -0.01 -0.01 6.14 40.98 0.25 0.24 16 25 C -0.03 0.06 2.86 71.24 0.20 0.27 16 26 O -0.55 2.61 10.34 -148.98 -1.54 1.07 16 27 Si 0.78 -0.63 31.29 68.60 2.15 1.52 16 28 H 0.10 -1.22 8.14 -2.39 -0.02 -1.24 16 29 H 0.09 -0.68 6.76 -2.39 -0.02 -0.69 16 30 H 0.10 -1.26 8.13 -2.39 -0.02 -1.28 16 31 H 0.21 -2.17 7.45 -2.91 -0.02 -2.19 16 32 H 0.41 -2.00 7.02 -92.70 -0.65 -2.65 16 33 H 0.09 -0.23 7.88 -2.39 -0.02 -0.25 16 34 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 35 H 0.08 -0.28 8.14 -2.38 -0.02 -0.30 16 36 H 0.13 -1.00 7.92 -2.39 -0.02 -1.02 16 37 H 0.41 -1.00 7.89 -92.71 -0.73 -1.73 16 38 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 39 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 40 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 41 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 42 H 0.10 -0.59 8.14 -2.38 -0.02 -0.61 16 43 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.06 0.48 5.88 -2.39 -0.01 0.47 16 45 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 46 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 47 H 0.14 -1.60 8.10 -2.39 -0.02 -1.62 16 48 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 49 H 0.13 1.22 6.67 -2.91 -0.02 1.20 16 50 H 0.12 -0.11 7.96 -2.39 -0.02 -0.13 16 51 H 0.40 -4.70 8.70 -74.06 -0.64 -5.35 16 52 H -0.30 -2.04 6.77 99.48 0.67 -1.36 16 53 H -0.28 -1.31 7.11 99.48 0.71 -0.61 16 Total: 0.00 -27.46 430.53 0.10 -27.36 By element: Atomic # 1 Polarization: -19.24 SS G_CDS: -1.06 Total: -20.29 kcal Atomic # 6 Polarization: 5.89 SS G_CDS: 7.37 Total: 13.27 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -7.13 Total: -5.68 kcal Atomic # 8 Polarization: -15.45 SS G_CDS: -1.93 Total: -17.38 kcal Atomic # 9 Polarization: 0.50 SS G_CDS: 0.70 Total: 1.20 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: 2.15 Total: 1.52 kcal Total: -27.46 0.10 -27.36 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13287730.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.481 kcal (2) G-P(sol) polarization free energy of solvation -27.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds