Wall clock time and date at job start Sun Mar 7 2021 08:24:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52996 * 109.47243 * 2 1 4 4 C 1.53001 * 109.47116 * 239.99962 * 2 1 3 5 5 O 1.45197 * 109.47049 * 120.00226 * 2 1 3 6 6 C 1.34634 * 117.00618 * 59.99563 * 5 2 1 7 7 O 1.21514 * 119.99621 * 0.02562 * 6 5 2 8 8 N 1.34775 * 120.00481 * 180.02562 * 6 5 2 9 9 C 1.46494 * 120.00168 * 180.02562 * 8 6 5 10 10 H 1.09006 * 112.85119 * 23.80384 * 9 8 6 11 11 C 1.53785 * 113.61654 * 154.99787 * 9 8 6 12 12 C 1.53784 * 87.07915 * 89.11734 * 11 9 8 13 13 F 1.39898 * 113.61457 * 270.80279 * 12 11 9 14 14 C 1.52997 * 113.61141 * 139.98255 * 12 11 9 15 15 N 1.46506 * 109.46718 * 179.97438 * 14 12 11 16 16 C 1.34777 * 119.99732 * 179.97438 * 15 14 12 17 17 O 1.21556 * 120.00100 * 0.02562 * 16 15 14 18 18 C 1.47848 * 119.99856 * 180.02562 * 16 15 14 19 19 C 1.39516 * 120.55809 * 0.02562 * 18 16 15 20 20 N 1.31689 * 120.56409 * 179.97438 * 19 18 16 21 21 C 1.31924 * 121.88234 * 359.70709 * 20 19 18 22 22 C 1.38352 * 121.07839 * 0.58672 * 21 20 19 23 23 C 1.50696 * 120.35147 * 179.69710 * 22 21 20 24 24 O 1.42903 * 109.47131 * 119.72208 * 23 22 21 25 25 Si 1.86305 * 109.47185 * 359.72749 * 23 22 21 26 26 C 1.38357 * 119.30140 * 359.42814 * 22 21 20 27 27 C 1.53776 * 113.61583 * 252.49684 * 9 8 6 28 28 H 1.08999 * 109.46907 * 300.00218 * 1 2 3 29 29 H 1.09002 * 109.46725 * 59.99957 * 1 2 3 30 30 H 1.08999 * 109.47015 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47274 * 180.02562 * 3 2 1 32 32 H 1.09002 * 109.47295 * 299.99694 * 3 2 1 33 33 H 1.08999 * 109.47347 * 60.00051 * 3 2 1 34 34 H 1.09009 * 109.46863 * 300.00181 * 4 2 1 35 35 H 1.09001 * 109.47055 * 59.99466 * 4 2 1 36 36 H 1.08996 * 109.47353 * 180.02562 * 4 2 1 37 37 H 0.96996 * 119.99972 * 0.02562 * 8 6 5 38 38 H 1.08999 * 113.61184 * 334.56992 * 11 9 8 39 39 H 1.08998 * 113.61523 * 203.66405 * 11 9 8 40 40 H 1.08995 * 109.47310 * 60.00211 * 14 12 11 41 41 H 1.08997 * 109.47501 * 299.99737 * 14 12 11 42 42 H 0.97002 * 120.00408 * 0.02562 * 15 14 12 43 43 H 1.07997 * 119.71960 * 359.96022 * 19 18 16 44 44 H 1.08001 * 119.46661 * 180.30910 * 21 20 19 45 45 H 1.08999 * 109.47358 * 239.72568 * 23 22 21 46 46 H 0.96700 * 114.00311 * 300.00591 * 24 23 22 47 47 H 1.48497 * 110.00233 * 179.97438 * 25 23 22 48 48 H 1.48492 * 109.99800 * 301.31995 * 25 23 22 49 49 H 1.08004 * 120.85513 * 180.25064 * 26 22 21 50 50 H 1.09000 * 113.61687 * 156.33273 * 27 9 8 51 51 H 1.09004 * 113.61732 * 25.43088 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3384 7 8 0.9516 -2.5097 0.5036 8 7 2.0672 -2.6654 2.4172 9 6 1.6740 -4.0668 2.5832 10 1 1.4224 -4.5505 1.6393 11 6 2.6471 -4.8809 3.4524 12 6 1.8054 -4.4458 4.6636 13 9 2.2281 -3.2414 5.2362 14 6 1.5995 -5.5550 5.6971 15 7 0.7904 -5.0445 6.8067 16 6 0.4792 -5.8512 7.8405 17 8 0.8701 -7.0021 7.8525 18 6 -0.3378 -5.3362 8.9600 19 6 -0.7930 -4.0174 8.9579 20 7 -1.5211 -3.5587 9.9548 21 6 -1.8523 -4.3170 10.9823 22 6 -1.4352 -5.6337 11.0620 23 6 -1.8175 -6.4832 12.2465 24 8 -2.5759 -7.6091 11.8003 25 14 -2.8428 -5.4735 13.4298 26 6 -0.6680 -6.1640 10.0400 27 6 0.6273 -4.2862 3.6882 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.1301 1.4425 -0.0005 32 1 1.6768 1.9563 -0.8900 33 1 1.6768 1.9563 0.8900 34 1 1.6766 -1.7490 -1.2492 35 1 1.6766 -0.2075 -2.1392 36 1 3.1300 -0.7217 -1.2490 37 1 2.6262 -2.2364 3.0837 38 1 3.6620 -4.4836 3.4606 39 1 2.6126 -5.9531 3.2592 40 1 2.5675 -5.8838 6.0749 41 1 1.0870 -6.3961 5.2302 42 1 0.4782 -4.1262 6.7969 43 1 -0.5460 -3.3670 8.1319 44 1 -2.4553 -3.9019 11.7763 45 1 -0.9157 -6.8296 12.7514 46 1 -3.3941 -7.3752 11.3409 47 1 -3.2268 -6.3001 14.6022 48 1 -2.0769 -4.2824 13.8766 49 1 -0.3321 -7.1899 10.0746 50 1 0.0406 -5.1958 3.5595 51 1 0.0116 -3.4089 3.8869 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_13287814.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:04 Heat of formation + Delta-G solvation = -126.935746 kcal Electronic energy + Delta-G solvation = -35142.928605 eV Core-core repulsion = 30152.722649 eV Total energy + Delta-G solvation = -4990.205957 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.178 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -48.92957 -41.94781 -41.88224 -40.45634 -39.82217 -37.94691 -37.88921 -36.09470 -35.28620 -33.99913 -33.78202 -33.11593 -29.31623 -28.37777 -28.31626 -27.29657 -27.09017 -25.79066 -24.39240 -23.84421 -22.98805 -21.75582 -21.20566 -20.65042 -19.51940 -19.25271 -18.30035 -18.09161 -17.72286 -17.66298 -17.25835 -17.17457 -16.89405 -16.57243 -16.52154 -16.37134 -15.98322 -15.97153 -15.56438 -15.52799 -15.37855 -14.83433 -14.75796 -14.52435 -14.43394 -14.38051 -14.24299 -13.77870 -13.69509 -13.49948 -13.35470 -13.16576 -13.09805 -12.92528 -12.88522 -12.80187 -12.73423 -12.46274 -12.32863 -12.17209 -11.80071 -11.44785 -11.41739 -11.33946 -11.15320 -11.12164 -10.65283 -10.61343 -10.40751 -10.28262 -10.19558 -5.02784 -0.61221 -0.05917 1.08801 1.21983 1.59022 1.62006 1.67724 1.81516 1.96298 2.59595 2.98225 3.01754 3.03630 3.09297 3.21108 3.36033 3.42583 3.55986 3.61403 3.64323 3.71227 3.72508 3.73339 3.78434 3.93001 4.08373 4.23070 4.30224 4.36559 4.44909 4.48196 4.57726 4.60417 4.60995 4.62423 4.75460 4.78029 4.80175 4.81701 4.84267 4.86360 4.87625 4.89100 4.90884 5.10681 5.14576 5.25991 5.28723 5.29910 5.40239 5.56844 6.21708 6.30994 6.61252 6.69848 6.92362 7.27987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.589 6.589 8 N -0.687 5.687 9 C 0.129 3.871 10 H 0.112 0.888 11 C -0.143 4.143 12 C 0.082 3.918 13 F -0.192 7.192 14 C 0.112 3.888 15 N -0.711 5.711 16 C 0.568 3.432 17 O -0.569 6.569 18 C -0.197 4.197 19 C 0.146 3.854 20 N -0.494 5.494 21 C 0.130 3.870 22 C -0.175 4.175 23 C -0.073 4.073 24 O -0.554 6.554 25 Si 0.782 3.218 26 C 0.000 4.000 27 C -0.160 4.160 28 H 0.061 0.939 29 H 0.087 0.913 30 H 0.065 0.935 31 H 0.068 0.932 32 H 0.099 0.901 33 H 0.069 0.931 34 H 0.065 0.935 35 H 0.087 0.913 36 H 0.061 0.939 37 H 0.414 0.586 38 H 0.097 0.903 39 H 0.146 0.854 40 H 0.079 0.921 41 H 0.104 0.896 42 H 0.413 0.587 43 H 0.186 0.814 44 H 0.184 0.816 45 H 0.113 0.887 46 H 0.397 0.603 47 H -0.294 1.294 48 H -0.277 1.277 49 H 0.139 0.861 50 H 0.133 0.867 51 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.799 3.471 -1.504 4.189 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.401 3.599 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.024 3.976 10 H 0.130 0.870 11 C -0.181 4.181 12 C 0.063 3.937 13 F -0.173 7.173 14 C -0.011 4.011 15 N -0.363 5.363 16 C 0.355 3.645 17 O -0.449 6.449 18 C -0.202 4.202 19 C -0.013 4.013 20 N -0.202 5.202 21 C -0.026 4.026 22 C -0.178 4.178 23 C -0.182 4.182 24 O -0.362 6.362 25 Si 0.687 3.313 26 C -0.026 4.026 27 C -0.199 4.199 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.084 0.916 31 H 0.087 0.913 32 H 0.117 0.883 33 H 0.088 0.912 34 H 0.084 0.916 35 H 0.106 0.894 36 H 0.080 0.920 37 H 0.251 0.749 38 H 0.115 0.885 39 H 0.164 0.836 40 H 0.097 0.903 41 H 0.122 0.878 42 H 0.251 0.749 43 H 0.202 0.798 44 H 0.201 0.799 45 H 0.130 0.870 46 H 0.247 0.753 47 H -0.222 1.222 48 H -0.203 1.203 49 H 0.157 0.843 50 H 0.151 0.849 51 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -1.696 3.398 -0.942 3.913 hybrid contribution 1.171 -0.525 0.224 1.303 sum -0.525 2.873 -0.718 3.008 Atomic orbital electron populations 1.22471 0.93897 1.03780 1.03519 1.22370 0.94559 0.92531 0.81460 1.21897 1.02436 0.90970 1.04250 1.22477 1.01617 1.02319 0.97301 1.86318 1.71542 1.23288 1.47352 1.18275 0.78543 0.80797 0.82242 1.90909 1.42016 1.70827 1.44223 1.44454 1.55031 1.12041 1.23105 1.21895 0.96127 0.79343 1.00191 0.87023 1.24014 0.99462 1.03805 0.90834 1.22237 0.98290 0.81051 0.92087 1.92858 1.91100 1.47163 1.86167 1.21927 0.96882 0.96122 0.86207 1.45652 1.54048 1.15930 1.20644 1.18119 0.79341 0.84962 0.82099 1.90811 1.55270 1.19191 1.79594 1.20976 1.04602 0.97090 0.97580 1.23374 0.89992 0.91694 0.96218 1.67794 1.12819 1.37648 1.01895 1.23243 0.94467 0.89462 0.95451 1.21460 1.00966 0.96650 0.98686 1.25227 1.01199 0.93009 0.98803 1.86509 1.39598 1.31118 1.78928 0.93737 0.84620 0.75773 0.77204 1.21644 0.90693 0.99965 0.90337 1.24223 0.96568 1.05568 0.93571 0.91984 0.89451 0.91615 0.91252 0.88263 0.91230 0.91612 0.89445 0.91997 0.74863 0.88465 0.83650 0.90284 0.87759 0.74891 0.79767 0.79945 0.86987 0.75285 1.22174 1.20318 0.84287 0.84879 0.89972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.41 8.37 71.98 0.60 0.19 16 2 C 0.13 0.29 1.13 -10.79 -0.01 0.27 16 3 C -0.14 0.34 8.85 71.98 0.64 0.97 16 4 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 5 O -0.37 -1.82 9.94 -55.43 -0.55 -2.37 16 6 C 0.65 3.50 8.06 129.79 1.05 4.54 16 7 O -0.59 -5.88 11.48 19.80 0.23 -5.65 16 8 N -0.69 0.46 5.19 -567.62 -2.95 -2.48 16 9 C 0.13 -0.58 4.32 45.52 0.20 -0.39 16 10 H 0.11 -0.27 7.46 -2.38 -0.02 -0.28 16 11 C -0.14 1.29 7.28 31.12 0.23 1.51 16 12 C 0.08 -0.58 1.66 -10.27 -0.02 -0.60 16 13 F -0.19 0.65 15.72 44.97 0.71 1.36 16 14 C 0.11 -0.58 5.37 86.38 0.46 -0.12 16 15 N -0.71 2.30 5.42 -465.97 -2.53 -0.22 16 16 C 0.57 1.80 7.78 86.79 0.68 2.47 16 17 O -0.57 -6.26 16.42 -3.89 -0.06 -6.32 16 18 C -0.20 -0.26 5.89 -19.99 -0.12 -0.38 16 19 C 0.15 -0.24 10.71 85.02 0.91 0.67 16 20 N -0.49 -0.25 10.35 -194.77 -2.01 -2.26 16 21 C 0.13 -0.26 9.84 84.71 0.83 0.58 16 22 C -0.18 0.18 5.39 -19.81 -0.11 0.08 16 23 C -0.07 0.17 2.83 71.23 0.20 0.37 16 24 O -0.55 0.56 12.78 -148.98 -1.90 -1.34 16 25 Si 0.78 -3.86 29.82 68.60 2.05 -1.81 16 26 C 0.00 0.00 9.31 22.73 0.21 0.21 16 27 C -0.16 1.14 7.33 31.12 0.23 1.37 16 28 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 29 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 30 H 0.06 0.47 5.88 -2.39 -0.01 0.46 16 31 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 32 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 33 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 34 H 0.06 0.48 5.88 -2.38 -0.01 0.46 16 35 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 36 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 37 H 0.41 -1.11 7.89 -92.71 -0.73 -1.84 16 38 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 39 H 0.15 -1.92 8.10 -2.39 -0.02 -1.93 16 40 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 41 H 0.10 -0.68 7.94 -2.39 -0.02 -0.70 16 42 H 0.41 -2.97 6.25 -92.71 -0.58 -3.55 16 43 H 0.19 -1.46 6.42 -2.91 -0.02 -1.48 16 44 H 0.18 -1.29 4.88 -2.91 -0.01 -1.31 16 45 H 0.11 -0.11 7.96 -2.39 -0.02 -0.13 16 46 H 0.40 -3.71 8.70 -74.06 -0.64 -4.36 16 47 H -0.29 -0.84 7.11 99.48 0.71 -0.13 16 48 H -0.28 0.25 7.11 99.48 0.71 0.95 16 49 H 0.14 0.68 7.74 -2.91 -0.02 0.66 16 50 H 0.13 -1.36 7.96 -2.39 -0.02 -1.38 16 51 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 Total: 0.00 -24.94 418.31 -1.35 -26.29 By element: Atomic # 1 Polarization: -16.20 SS G_CDS: -0.91 Total: -17.12 kcal Atomic # 6 Polarization: 5.35 SS G_CDS: 6.58 Total: 11.94 kcal Atomic # 7 Polarization: 2.52 SS G_CDS: -7.49 Total: -4.97 kcal Atomic # 8 Polarization: -13.40 SS G_CDS: -2.29 Total: -15.69 kcal Atomic # 9 Polarization: 0.65 SS G_CDS: 0.71 Total: 1.36 kcal Atomic # 14 Polarization: -3.86 SS G_CDS: 2.05 Total: -1.81 kcal Total: -24.94 -1.35 -26.29 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13287814.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.644 kcal (2) G-P(sol) polarization free energy of solvation -24.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.354 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.292 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.936 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds