Wall clock time and date at job start Sun Mar 7 2021 08:24:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36415 * 125.80157 * 2 1 4 4 C 1.47382 * 127.19393 * 359.69945 * 3 2 1 5 5 O 1.21619 * 119.99977 * 0.02562 * 4 3 2 6 6 N 1.34775 * 120.00534 * 179.97438 * 4 3 2 7 7 C 1.46496 * 120.00337 * 179.97438 * 6 4 3 8 8 C 1.53003 * 109.47097 * 180.02562 * 7 6 4 9 9 F 1.39903 * 112.84807 * 48.80749 * 8 7 6 10 10 C 1.53774 * 113.61304 * 180.02562 * 8 7 6 11 11 C 1.53779 * 87.08299 * 139.98609 * 10 8 7 12 12 H 1.09006 * 113.61604 * 220.02227 * 11 10 8 13 13 N 1.46501 * 113.61844 * 89.11470 * 11 10 8 14 14 C 1.34770 * 120.00115 * 155.00523 * 13 11 10 15 15 O 1.21513 * 120.00035 * 359.97438 * 14 13 11 16 16 O 1.34636 * 120.00089 * 180.02562 * 14 13 11 17 17 C 1.45200 * 117.00255 * 179.97438 * 16 14 13 18 18 C 1.53005 * 109.46883 * 60.00167 * 17 16 14 19 19 C 1.52996 * 109.47393 * 180.02562 * 17 16 14 20 20 C 1.52998 * 109.47289 * 300.00615 * 17 16 14 21 21 C 1.53780 * 113.61628 * 277.50039 * 8 7 6 22 22 C 1.47023 * 105.61588 * 179.97438 * 3 2 1 23 23 C 1.34173 * 105.95145 * 0.02562 * 22 3 2 24 24 C 1.50706 * 125.43217 * 179.97438 * 23 22 3 25 25 O 1.42898 * 109.47076 * 65.02284 * 24 23 22 26 26 Si 1.86302 * 109.46602 * 185.02096 * 24 23 22 27 27 O 1.33646 * 125.80045 * 179.97438 * 2 1 3 28 28 H 1.09000 * 109.46974 * 89.99936 * 1 2 3 29 29 H 1.08998 * 109.47077 * 210.00205 * 1 2 3 30 30 H 1.09003 * 109.47116 * 330.00303 * 1 2 3 31 31 H 0.97003 * 119.99435 * 0.02562 * 6 4 3 32 32 H 1.09002 * 109.47222 * 300.00439 * 7 6 4 33 33 H 1.09006 * 109.46693 * 60.00542 * 7 6 4 34 34 H 1.09005 * 113.61759 * 254.52942 * 10 8 7 35 35 H 1.08999 * 113.61891 * 25.35049 * 10 8 7 36 36 H 0.96995 * 119.99522 * 335.00493 * 13 11 10 37 37 H 1.09000 * 109.47085 * 60.00045 * 18 17 16 38 38 H 1.08999 * 109.46845 * 180.02562 * 18 17 16 39 39 H 1.09004 * 109.47011 * 299.99782 * 18 17 16 40 40 H 1.08993 * 109.47394 * 59.99760 * 19 17 16 41 41 H 1.08999 * 109.47085 * 180.02562 * 19 17 16 42 42 H 1.09008 * 109.47141 * 299.99936 * 19 17 16 43 43 H 1.08998 * 109.47599 * 59.99122 * 20 17 16 44 44 H 1.08999 * 109.47343 * 180.02562 * 20 17 16 45 45 H 1.09009 * 109.46733 * 299.99400 * 20 17 16 46 46 H 1.09001 * 113.61297 * 334.56864 * 21 8 7 47 47 H 1.08998 * 113.61238 * 105.47330 * 21 8 7 48 48 H 1.08001 * 127.01735 * 179.97438 * 22 3 2 49 49 H 1.08992 * 109.47159 * 305.01697 * 24 23 22 50 50 H 0.96702 * 114.00131 * 60.00099 * 25 24 23 51 51 H 1.48500 * 110.00009 * 58.68308 * 26 24 23 52 52 H 1.48504 * 109.99702 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5158 -0.0062 5 8 0.6889 2.7892 -0.0116 6 7 2.7930 3.5016 -0.0048 7 6 2.3645 4.9025 -0.0114 8 6 3.5948 5.8121 -0.0089 9 9 4.5408 5.4491 -0.9735 10 6 3.2524 7.3113 -0.0149 11 6 4.4123 7.4998 0.9771 12 1 4.1958 8.2143 1.7713 13 7 5.7046 7.7405 0.3302 14 6 6.6756 8.4022 0.9901 15 8 6.4791 8.7998 2.1214 16 8 7.8630 8.6238 0.3954 17 6 8.8618 9.3435 1.1654 18 6 9.1808 8.5633 2.4424 19 6 10.1346 9.4990 0.3308 20 6 8.3222 10.7268 1.5343 21 6 4.1931 6.0352 1.3901 22 6 3.6849 0.5991 0.0006 23 6 3.5858 -0.7390 0.0004 24 6 4.7459 -1.7010 0.0003 25 8 5.4756 -1.5673 1.2216 26 14 4.1069 -3.4442 -0.1538 27 8 2.2888 -1.0840 0.0005 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3633 -0.8899 0.5139 30 1 -0.3633 0.8900 0.5138 31 1 3.7381 3.2835 -0.0001 32 1 1.7713 5.0968 -0.9050 33 1 1.7625 5.1025 0.8750 34 1 3.4191 7.7934 -0.9782 35 1 2.2735 7.5373 0.4078 36 1 5.8612 7.4235 -0.5730 37 1 9.5652 7.5778 2.1796 38 1 9.9303 9.1038 3.0206 39 1 8.2738 8.4530 3.0368 40 1 9.9071 10.0549 -0.5787 41 1 10.8845 10.0388 0.9090 42 1 10.5193 8.5135 0.0677 43 1 7.4152 10.6164 2.1287 44 1 9.0722 11.2672 2.1119 45 1 8.0950 11.2826 0.6245 46 1 3.4718 5.9126 2.1981 47 1 5.1193 5.4868 1.5613 48 1 4.5928 1.1841 0.0004 49 1 5.4020 -1.4788 -0.8412 50 1 4.9529 -1.7508 2.0142 51 1 3.3193 -3.5877 -1.4045 52 1 5.2412 -4.4027 -0.1545 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_13308374.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:08 Heat of formation + Delta-G solvation = -152.122213 kcal Electronic energy + Delta-G solvation = -36269.135056 eV Core-core repulsion = 31152.806792 eV Total energy + Delta-G solvation = -5116.328264 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.183 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -48.94439 -43.79376 -41.91598 -40.63891 -39.84963 -38.02058 -37.89898 -35.99273 -35.28386 -34.26791 -33.79753 -33.11066 -29.87967 -28.85925 -28.39287 -28.33274 -27.10349 -25.88048 -24.83396 -23.94133 -23.03284 -22.06983 -21.25207 -21.07971 -20.46166 -19.39407 -18.98534 -18.02471 -17.73233 -17.67819 -17.46855 -17.27662 -17.05532 -16.86682 -16.48566 -16.29602 -16.04475 -15.98561 -15.71215 -15.54070 -15.39621 -15.36229 -14.66777 -14.56660 -14.45556 -14.27656 -14.17722 -13.99998 -13.85392 -13.76120 -13.65542 -13.37285 -13.18109 -13.11603 -12.94151 -12.90230 -12.88875 -12.81680 -12.78378 -12.47805 -12.34548 -12.26347 -11.71841 -11.43462 -11.39123 -11.17122 -11.16658 -10.97215 -10.62300 -10.31981 -10.24369 -9.61299 -5.01629 0.20167 0.79284 1.06938 1.15478 1.38933 1.65898 1.73616 1.89756 2.01814 2.19925 2.97148 3.01620 3.06770 3.19634 3.20761 3.46128 3.54474 3.62319 3.70660 3.71148 3.74979 3.76786 3.91369 4.09134 4.29112 4.30443 4.34357 4.43186 4.47162 4.56130 4.58858 4.59349 4.60070 4.60525 4.65447 4.73810 4.76098 4.77312 4.80142 4.84708 4.84766 4.86208 4.88800 5.09091 5.11162 5.19216 5.24465 5.25760 5.28780 5.38608 5.54852 5.86386 6.28790 6.34541 6.60692 7.05548 7.25815 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.089 3.911 3 C -0.272 4.272 4 C 0.592 3.408 5 O -0.568 6.568 6 N -0.714 5.714 7 C 0.115 3.885 8 C 0.081 3.919 9 F -0.195 7.195 10 C -0.141 4.141 11 C 0.130 3.870 12 H 0.113 0.887 13 N -0.687 5.687 14 C 0.648 3.352 15 O -0.588 6.588 16 O -0.371 6.371 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.139 4.139 20 C -0.180 4.180 21 C -0.161 4.161 22 C -0.151 4.151 23 C -0.059 4.059 24 C -0.026 4.026 25 O -0.540 6.540 26 Si 0.779 3.221 27 O -0.169 6.169 28 H 0.096 0.904 29 H 0.103 0.897 30 H 0.100 0.900 31 H 0.410 0.590 32 H 0.078 0.922 33 H 0.103 0.897 34 H 0.097 0.903 35 H 0.147 0.853 36 H 0.414 0.586 37 H 0.060 0.940 38 H 0.087 0.913 39 H 0.065 0.935 40 H 0.069 0.931 41 H 0.099 0.901 42 H 0.068 0.932 43 H 0.065 0.935 44 H 0.087 0.913 45 H 0.061 0.939 46 H 0.133 0.867 47 H 0.077 0.923 48 H 0.171 0.829 49 H 0.138 0.862 50 H 0.400 0.600 51 H -0.295 1.295 52 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.088 -0.515 1.194 1.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.035 3.965 3 C -0.276 4.276 4 C 0.381 3.619 5 O -0.450 6.450 6 N -0.366 5.366 7 C -0.009 4.009 8 C 0.062 3.938 9 F -0.175 7.175 10 C -0.179 4.179 11 C 0.026 3.974 12 H 0.131 0.869 13 N -0.347 5.347 14 C 0.402 3.598 15 O -0.479 6.479 16 O -0.286 6.286 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.196 4.196 20 C -0.237 4.237 21 C -0.200 4.200 22 C -0.170 4.170 23 C -0.107 4.107 24 C -0.136 4.136 25 O -0.349 6.349 26 Si 0.684 3.316 27 O -0.066 6.066 28 H 0.114 0.886 29 H 0.122 0.878 30 H 0.118 0.882 31 H 0.246 0.754 32 H 0.096 0.904 33 H 0.121 0.879 34 H 0.115 0.885 35 H 0.165 0.835 36 H 0.251 0.749 37 H 0.079 0.921 38 H 0.106 0.894 39 H 0.084 0.916 40 H 0.088 0.912 41 H 0.118 0.882 42 H 0.087 0.913 43 H 0.084 0.916 44 H 0.106 0.894 45 H 0.080 0.920 46 H 0.151 0.849 47 H 0.096 0.904 48 H 0.188 0.812 49 H 0.155 0.845 50 H 0.251 0.749 51 H -0.222 1.222 52 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges -0.316 -0.943 0.856 1.312 hybrid contribution 0.996 0.460 -0.895 1.416 sum 0.680 -0.482 -0.039 0.834 Atomic orbital electron populations 1.20733 0.82289 1.05902 1.05157 1.23270 0.94860 0.82873 0.95454 1.21195 0.94105 0.93608 1.18696 1.17280 0.85085 0.84282 0.75277 1.90765 1.17555 1.84481 1.52175 1.45568 1.10228 1.05702 1.75083 1.21881 0.95324 0.78977 1.04731 1.22263 0.87045 0.96295 0.88173 1.92850 1.66465 1.92880 1.65340 1.24006 1.00527 0.91688 1.01727 1.21885 0.80929 0.97853 0.96780 0.86876 1.44462 1.12148 1.58652 1.19416 1.18266 0.80791 0.77728 0.83056 1.90906 1.81910 1.56150 1.18930 1.86320 1.22530 1.72020 1.47712 1.22375 0.86120 0.90945 0.91483 1.22474 1.03453 1.00642 0.97131 1.21899 0.93627 1.03600 1.00436 1.22476 1.03336 0.95215 1.02668 1.24209 1.03156 0.96371 0.96227 1.22767 0.96445 0.93801 1.04037 1.22886 0.82964 0.95911 1.08892 1.24498 0.90247 1.07367 0.91473 1.86536 1.39590 1.93157 1.15577 0.93244 0.79683 0.72641 0.86055 1.83673 1.16636 1.34946 1.71393 0.88574 0.87846 0.88188 0.75403 0.90417 0.87869 0.88451 0.83491 0.74920 0.92077 0.89374 0.91620 0.91214 0.88194 0.91312 0.91591 0.89390 0.91967 0.84906 0.90409 0.81184 0.84522 0.74935 1.22197 1.20569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.06 9.88 71.24 0.70 0.76 16 2 C 0.09 0.27 7.37 25.26 0.19 0.46 16 3 C -0.27 -1.09 6.31 -18.99 -0.12 -1.21 16 4 C 0.59 3.16 7.81 86.65 0.68 3.84 16 5 O -0.57 -5.95 14.85 -4.09 -0.06 -6.02 16 6 N -0.71 0.05 5.46 -466.40 -2.55 -2.50 16 7 C 0.11 -0.36 5.36 86.38 0.46 0.10 16 8 C 0.08 -0.41 1.66 -10.27 -0.02 -0.43 16 9 F -0.19 0.17 15.72 44.97 0.71 0.88 16 10 C -0.14 1.10 7.28 31.12 0.23 1.33 16 11 C 0.13 -0.42 4.32 45.51 0.20 -0.22 16 12 H 0.11 -0.16 7.47 -2.38 -0.02 -0.18 16 13 N -0.69 -0.43 5.19 -567.67 -2.95 -3.38 16 14 C 0.65 4.17 8.06 129.79 1.05 5.22 16 15 O -0.59 -6.37 11.48 19.80 0.23 -6.15 16 16 O -0.37 -2.19 9.94 -55.45 -0.55 -2.74 16 17 C 0.13 0.38 1.13 -10.79 -0.01 0.37 16 18 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 19 C -0.14 0.24 8.85 71.98 0.64 0.88 16 20 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 21 C -0.16 0.82 7.32 31.11 0.23 1.05 16 22 C -0.15 -0.15 10.48 23.65 0.25 0.10 16 23 C -0.06 -0.03 6.18 24.76 0.15 0.13 16 24 C -0.03 0.06 2.97 71.24 0.21 0.28 16 25 O -0.54 1.52 12.88 -148.98 -1.92 -0.40 16 26 Si 0.78 -1.95 32.09 68.60 2.20 0.25 16 27 O -0.17 -0.32 8.90 4.51 0.04 -0.28 16 28 H 0.10 -0.16 8.14 -2.39 -0.02 -0.18 16 29 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 30 H 0.10 0.20 6.50 -2.39 -0.02 0.18 16 31 H 0.41 -0.99 7.36 -92.71 -0.68 -1.67 16 32 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.10 -0.51 7.94 -2.38 -0.02 -0.53 16 34 H 0.10 -0.73 8.14 -2.38 -0.02 -0.75 16 35 H 0.15 -1.81 8.10 -2.39 -0.02 -1.83 16 36 H 0.41 -0.51 7.89 -92.71 -0.73 -1.24 16 37 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 40 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 41 H 0.10 -0.52 8.14 -2.39 -0.02 -0.54 16 42 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 43 H 0.07 0.51 5.88 -2.39 -0.01 0.50 16 44 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 45 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 46 H 0.13 -1.11 7.96 -2.39 -0.02 -1.12 16 47 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 48 H 0.17 -0.44 7.74 -2.91 -0.02 -0.46 16 49 H 0.14 -0.46 7.96 -2.39 -0.02 -0.48 16 50 H 0.40 -4.14 8.70 -74.06 -0.64 -4.79 16 51 H -0.29 -1.33 7.11 99.48 0.71 -0.62 16 52 H -0.28 -0.82 7.11 99.48 0.71 -0.11 16 Total: 0.00 -22.04 429.56 0.15 -21.90 By element: Atomic # 1 Polarization: -13.30 SS G_CDS: -1.04 Total: -14.34 kcal Atomic # 6 Polarization: 6.74 SS G_CDS: 6.03 Total: 12.77 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -5.49 Total: -5.88 kcal Atomic # 8 Polarization: -13.32 SS G_CDS: -2.26 Total: -15.58 kcal Atomic # 9 Polarization: 0.17 SS G_CDS: 0.71 Total: 0.88 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: 2.20 Total: 0.25 kcal Total: -22.04 0.15 -21.90 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13308374.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.226 kcal (2) G-P(sol) polarization free energy of solvation -22.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.271 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds