Wall clock time and date at job start Sun Mar 7 2021 08:24:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.52999 * 109.47353 * 2 1 4 4 C 1.53000 * 109.47245 * 239.99384 * 2 1 3 5 5 O 1.45207 * 109.47267 * 120.00063 * 2 1 3 6 6 C 1.34630 * 117.00121 * 59.99860 * 5 2 1 7 7 O 1.21509 * 120.00498 * 0.02562 * 6 5 2 8 8 N 1.34783 * 120.00195 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00298 * 179.97438 * 8 6 5 10 10 H 1.09003 * 112.84522 * 336.19536 * 9 8 6 11 11 C 1.53956 * 113.61432 * 107.46148 * 9 8 6 12 12 C 1.53783 * 87.01705 * 89.19865 * 11 9 8 13 13 F 1.39899 * 113.61891 * 270.77017 * 12 11 9 14 14 C 1.53000 * 113.61436 * 139.94886 * 12 11 9 15 15 N 1.46505 * 109.47023 * 85.86426 * 14 12 11 16 16 C 1.34779 * 120.00152 * 180.02562 * 15 14 12 17 17 O 1.21588 * 119.99597 * 0.02562 * 16 15 14 18 18 C 1.47535 * 119.99858 * 180.02562 * 16 15 14 19 19 C 1.40142 * 120.19005 * 180.02562 * 18 16 15 20 20 O 1.35658 * 120.14881 * 0.04069 * 19 18 16 21 21 C 1.38695 * 119.69714 * 180.02562 * 19 18 16 22 22 C 1.38058 * 120.09221 * 359.97438 * 21 19 18 23 23 C 1.50699 * 119.80977 * 179.97438 * 22 21 19 24 24 O 1.42901 * 109.46830 * 300.00210 * 23 22 21 25 25 Si 1.86298 * 109.46950 * 180.02562 * 23 22 21 26 26 C 1.38549 * 120.38385 * 0.26427 * 22 21 19 27 27 C 1.37794 * 120.30020 * 359.47693 * 26 22 21 28 28 C 1.53778 * 113.61655 * 204.99864 * 9 8 6 29 29 H 1.09001 * 109.47115 * 300.00037 * 1 2 3 30 30 H 1.09000 * 109.47546 * 60.00165 * 1 2 3 31 31 H 1.09003 * 109.47079 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47241 * 180.02562 * 3 2 1 33 33 H 1.08997 * 109.46822 * 299.99874 * 3 2 1 34 34 H 1.09001 * 109.47040 * 59.99917 * 3 2 1 35 35 H 1.08994 * 109.47345 * 300.00358 * 4 2 1 36 36 H 1.09009 * 109.46755 * 60.00546 * 4 2 1 37 37 H 1.08999 * 109.47208 * 179.97438 * 4 2 1 38 38 H 0.97006 * 119.99588 * 359.97438 * 8 6 5 39 39 H 1.08996 * 113.66446 * 334.67491 * 11 9 8 40 40 H 1.08995 * 113.61270 * 203.72136 * 11 9 8 41 41 H 1.08998 * 109.47271 * 325.86964 * 14 12 11 42 42 H 1.08996 * 109.47691 * 205.86761 * 14 12 11 43 43 H 0.97002 * 119.99871 * 0.02562 * 15 14 12 44 44 H 0.96698 * 113.99880 * 269.97987 * 20 19 18 45 45 H 1.08006 * 119.95294 * 180.02562 * 21 19 18 46 46 H 1.08991 * 109.47351 * 60.00358 * 23 22 21 47 47 H 0.96708 * 114.00246 * 299.99864 * 24 23 22 48 48 H 1.48506 * 109.99834 * 180.02562 * 25 23 22 49 49 H 1.48502 * 110.00011 * 301.31529 * 25 23 22 50 50 H 1.07999 * 119.84884 * 179.71745 * 26 22 21 51 51 H 1.08001 * 120.04312 * 180.25639 * 27 26 22 52 52 H 1.08998 * 113.61779 * 156.25196 * 28 9 8 53 53 H 1.09001 * 113.61227 * 25.34199 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7214 -1.2491 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9723 1.3384 7 8 0.9516 -2.5098 0.5037 8 7 2.0673 -2.6654 2.4173 9 6 1.6732 -4.0666 2.5838 10 1 0.7588 -4.3159 2.0454 11 6 2.8222 -5.0630 2.3449 12 6 3.1479 -4.9226 3.8412 13 9 4.0436 -3.8861 4.1251 14 6 3.5355 -6.2427 4.5106 15 7 4.9696 -6.4802 4.3279 16 6 5.5389 -7.5910 4.8365 17 8 4.8621 -8.3961 5.4465 18 6 6.9832 -7.8298 4.6531 19 6 7.5791 -8.9837 5.1797 20 8 6.8304 -9.8873 5.8603 21 6 8.9379 -9.1977 5.0017 22 6 9.6985 -8.2777 4.3081 23 6 11.1744 -8.5163 4.1189 24 8 11.8106 -8.6017 5.3956 25 14 11.9124 -7.1059 3.1510 26 6 9.1139 -7.1333 3.7901 27 6 7.7645 -6.9072 3.9530 28 6 1.6737 -4.5368 4.0480 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.1300 1.4424 -0.0005 33 1 1.6767 1.9562 -0.8900 34 1 1.6766 1.9563 0.8900 35 1 1.6766 -1.7490 -1.2491 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7210 -1.2494 38 1 2.6269 -2.2365 3.0834 39 1 3.6046 -4.6796 1.6899 40 1 2.4840 -6.0601 2.0633 41 1 2.9717 -7.0586 4.0584 42 1 3.3086 -6.1906 5.5754 43 1 5.5094 -5.8380 3.8410 44 1 6.7798 -9.7195 6.8113 45 1 9.4014 -10.0858 5.4054 46 1 11.3249 -9.4487 3.5749 47 1 11.7173 -7.8049 5.9357 48 1 13.3676 -7.3296 2.9570 49 1 11.2375 -6.9860 1.8336 50 1 9.7180 -6.4171 3.2529 51 1 7.3123 -6.0158 3.5440 52 1 1.0209 -5.3898 4.2329 53 1 1.5303 -3.7292 4.7659 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_13422076.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:18 Heat of formation + Delta-G solvation = -178.948010 kcal Electronic energy + Delta-G solvation = -37616.857718 eV Core-core repulsion = 32371.140060 eV Total energy + Delta-G solvation = -5245.717659 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.183 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -48.91603 -41.89622 -41.65299 -40.18157 -39.70667 -38.46396 -37.86347 -37.15488 -35.91184 -35.25784 -33.94028 -32.83145 -31.12729 -29.32359 -28.37851 -28.31270 -27.26219 -27.05212 -24.73150 -23.90812 -23.45666 -22.87490 -21.65802 -21.20397 -20.66865 -19.66569 -19.31129 -18.80575 -18.20571 -17.67899 -17.59688 -17.26584 -17.05901 -16.82582 -16.67166 -16.41483 -16.33308 -16.19458 -15.95820 -15.71453 -15.53213 -15.45681 -15.36706 -15.18238 -14.75085 -14.55077 -14.45057 -14.33357 -13.83120 -13.78962 -13.70310 -13.35195 -13.21399 -13.16086 -13.09034 -12.95462 -12.92235 -12.88208 -12.79472 -12.45811 -12.32663 -12.31139 -12.19714 -11.72328 -11.64749 -11.41590 -11.37822 -11.15289 -10.97303 -10.52716 -10.33549 -10.26145 -10.03500 -9.79855 -4.99432 -0.43842 0.12931 1.08712 1.27414 1.62547 1.68145 1.69863 1.93693 1.98700 2.55638 2.99008 3.03580 3.06223 3.10005 3.20800 3.43732 3.52309 3.56047 3.63381 3.69609 3.72857 3.78426 3.78627 3.93199 4.06254 4.25147 4.32824 4.35752 4.37619 4.48028 4.55787 4.60366 4.60701 4.61494 4.63261 4.74568 4.75641 4.78266 4.81763 4.85812 4.86674 4.87674 4.90638 5.00935 5.11349 5.12555 5.22592 5.23269 5.26027 5.29508 5.40527 5.57185 5.57756 6.31731 6.35208 6.70771 6.74117 7.07741 7.28467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.686 5.686 9 C 0.130 3.870 10 H 0.110 0.890 11 C -0.162 4.162 12 C 0.085 3.915 13 F -0.190 7.190 14 C 0.114 3.886 15 N -0.715 5.715 16 C 0.558 3.442 17 O -0.559 6.559 18 C -0.181 4.181 19 C 0.156 3.844 20 O -0.498 6.498 21 C -0.140 4.140 22 C -0.072 4.072 23 C -0.083 4.083 24 O -0.554 6.554 25 Si 0.788 3.212 26 C -0.132 4.132 27 C -0.054 4.054 28 C -0.143 4.143 29 H 0.061 0.939 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.062 0.938 38 H 0.415 0.585 39 H 0.081 0.919 40 H 0.129 0.871 41 H 0.096 0.904 42 H 0.079 0.921 43 H 0.412 0.588 44 H 0.408 0.592 45 H 0.135 0.865 46 H 0.109 0.891 47 H 0.397 0.603 48 H -0.302 1.302 49 H -0.278 1.278 50 H 0.162 0.838 51 H 0.163 0.837 52 H 0.143 0.857 53 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.411 7.299 0.672 7.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.401 3.599 7 O -0.481 6.481 8 N -0.345 5.345 9 C 0.025 3.975 10 H 0.128 0.872 11 C -0.201 4.201 12 C 0.067 3.933 13 F -0.171 7.171 14 C -0.010 4.010 15 N -0.368 5.368 16 C 0.346 3.654 17 O -0.439 6.439 18 C -0.184 4.184 19 C 0.109 3.891 20 O -0.311 6.311 21 C -0.158 4.158 22 C -0.073 4.073 23 C -0.193 4.193 24 O -0.362 6.362 25 Si 0.693 3.307 26 C -0.149 4.149 27 C -0.073 4.073 28 C -0.181 4.181 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.083 0.917 32 H 0.088 0.912 33 H 0.117 0.883 34 H 0.088 0.912 35 H 0.083 0.917 36 H 0.105 0.895 37 H 0.081 0.919 38 H 0.252 0.748 39 H 0.100 0.900 40 H 0.147 0.853 41 H 0.114 0.886 42 H 0.098 0.902 43 H 0.250 0.750 44 H 0.268 0.732 45 H 0.153 0.847 46 H 0.126 0.874 47 H 0.248 0.752 48 H -0.231 1.231 49 H -0.205 1.205 50 H 0.179 0.821 51 H 0.180 0.820 52 H 0.161 0.839 53 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.049 5.993 -0.808 6.138 hybrid contribution 0.302 -0.294 0.570 0.709 sum 1.352 5.699 -0.238 5.862 Atomic orbital electron populations 1.22478 0.93980 1.03765 1.03533 1.22364 0.94497 0.92558 0.81450 1.21896 1.02484 0.90906 1.04252 1.22474 1.01648 1.02280 0.97308 1.86318 1.71486 1.23260 1.47354 1.18277 0.78493 0.80743 0.82349 1.90910 1.42127 1.70993 1.44022 1.44438 1.54951 1.11857 1.23294 1.21911 0.99052 0.78274 0.98240 0.87169 1.24254 0.99261 1.02237 0.94334 1.22198 0.89518 0.84294 0.97331 1.92850 1.69683 1.59956 1.94579 1.21864 0.81421 0.95701 1.02047 1.45663 1.10276 1.23429 1.57448 1.18239 0.87327 0.81146 0.78642 1.90819 1.64633 1.46097 1.42313 1.20425 0.93683 0.97388 1.06951 1.18716 0.89197 0.87085 0.94073 1.84715 1.71161 1.49489 1.25722 1.21334 0.91817 1.00989 1.01685 1.20568 0.96661 0.94125 0.95905 1.25391 0.90074 1.11293 0.92501 1.86500 1.76202 1.45144 1.28355 0.93657 0.75542 0.82711 0.78748 1.21225 0.95260 0.97298 1.01141 1.21457 0.93476 0.97873 0.94450 1.24007 0.93819 1.04431 0.95862 0.91947 0.89472 0.91666 0.91159 0.88308 0.91194 0.91683 0.89493 0.91926 0.74769 0.89995 0.85281 0.88574 0.90239 0.74987 0.73162 0.84714 0.87366 0.75236 1.23072 1.20480 0.82110 0.81984 0.83867 0.88268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.40 8.37 71.98 0.60 0.21 16 2 C 0.13 0.25 1.13 -10.80 -0.01 0.23 16 3 C -0.14 0.40 8.85 71.98 0.64 1.04 16 4 C -0.18 -0.38 8.37 71.98 0.60 0.23 16 5 O -0.37 -1.67 9.94 -55.39 -0.55 -2.22 16 6 C 0.65 3.37 8.06 129.79 1.05 4.42 16 7 O -0.59 -5.92 11.48 19.81 0.23 -5.69 16 8 N -0.69 0.62 5.19 -567.33 -2.94 -2.33 16 9 C 0.13 -0.55 4.33 45.58 0.20 -0.35 16 10 H 0.11 -0.21 7.46 -2.39 -0.02 -0.22 16 11 C -0.16 1.03 7.34 31.18 0.23 1.26 16 12 C 0.09 -0.59 1.71 -10.26 -0.02 -0.60 16 13 F -0.19 0.78 15.57 44.97 0.70 1.48 16 14 C 0.11 -0.49 5.41 86.38 0.47 -0.02 16 15 N -0.71 1.74 5.40 -466.27 -2.52 -0.78 16 16 C 0.56 2.45 7.76 86.69 0.67 3.12 16 17 O -0.56 -6.80 15.16 16.92 0.26 -6.54 16 18 C -0.18 -0.35 5.89 -20.01 -0.12 -0.47 16 19 C 0.16 0.69 6.72 22.84 0.15 0.84 16 20 O -0.50 -3.53 11.58 -68.81 -0.80 -4.32 16 21 C -0.14 -0.25 9.53 22.34 0.21 -0.03 16 22 C -0.07 0.16 5.39 -19.83 -0.11 0.05 16 23 C -0.08 0.24 2.81 71.24 0.20 0.44 16 24 O -0.55 1.07 12.76 -148.98 -1.90 -0.83 16 25 Si 0.79 -4.31 29.77 68.60 2.04 -2.27 16 26 C -0.13 0.73 8.64 22.24 0.19 0.92 16 27 C -0.05 0.25 9.54 22.52 0.21 0.47 16 28 C -0.14 1.25 7.28 31.12 0.23 1.48 16 29 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 30 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 31 H 0.06 0.47 5.88 -2.39 -0.01 0.46 16 32 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 34 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 35 H 0.06 0.47 5.88 -2.39 -0.01 0.45 16 36 H 0.09 -0.10 8.14 -2.38 -0.02 -0.12 16 37 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 38 H 0.42 -1.35 7.89 -92.70 -0.73 -2.08 16 39 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 40 H 0.13 -1.13 7.92 -2.39 -0.02 -1.15 16 41 H 0.10 -0.44 7.87 -2.39 -0.02 -0.46 16 42 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 43 H 0.41 -2.79 6.11 -92.71 -0.57 -3.36 16 44 H 0.41 -0.06 9.06 -74.06 -0.67 -0.73 16 45 H 0.13 0.30 8.06 -2.91 -0.02 0.28 16 46 H 0.11 -0.12 7.96 -2.39 -0.02 -0.14 16 47 H 0.40 -4.16 8.70 -74.05 -0.64 -4.80 16 48 H -0.30 -0.90 7.11 99.48 0.71 -0.20 16 49 H -0.28 0.45 7.11 99.48 0.71 1.16 16 50 H 0.16 -1.75 4.85 -2.91 -0.01 -1.76 16 51 H 0.16 -1.79 6.40 -2.91 -0.02 -1.81 16 52 H 0.14 -1.79 8.10 -2.39 -0.02 -1.81 16 53 H 0.10 -0.87 8.14 -2.39 -0.02 -0.89 16 Total: 0.00 -27.49 431.76 -1.66 -29.15 By element: Atomic # 1 Polarization: -17.30 SS G_CDS: -1.57 Total: -18.87 kcal Atomic # 6 Polarization: 7.82 SS G_CDS: 5.40 Total: 13.22 kcal Atomic # 7 Polarization: 2.36 SS G_CDS: -5.46 Total: -3.11 kcal Atomic # 8 Polarization: -16.84 SS G_CDS: -2.76 Total: -19.61 kcal Atomic # 9 Polarization: 0.78 SS G_CDS: 0.70 Total: 1.48 kcal Atomic # 14 Polarization: -4.31 SS G_CDS: 2.04 Total: -2.27 kcal Total: -27.49 -1.66 -29.15 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13422076.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.799 kcal (2) G-P(sol) polarization free energy of solvation -27.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -177.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.948 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds