Wall clock time and date at job start Sun Mar 7 2021 08:24:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47027 * 2 1 4 4 C 1.52999 * 109.47645 * 240.00242 * 2 1 3 5 5 O 1.45198 * 109.47520 * 119.99772 * 2 1 3 6 6 C 1.34641 * 116.99530 * 60.00066 * 5 2 1 7 7 O 1.21509 * 120.00251 * 0.02562 * 6 5 2 8 8 N 1.34778 * 119.99552 * 180.02562 * 6 5 2 9 9 C 1.46501 * 119.99884 * 180.02562 * 8 6 5 10 10 H 1.09006 * 112.84625 * 336.19022 * 9 8 6 11 11 C 1.53950 * 113.54289 * 107.50408 * 9 8 6 12 12 C 1.53774 * 87.02260 * 89.18885 * 11 9 8 13 13 F 1.39906 * 113.61608 * 270.77425 * 12 11 9 14 14 C 1.52996 * 113.61706 * 139.95506 * 12 11 9 15 15 N 1.46498 * 109.47059 * 85.86090 * 14 12 11 16 16 C 1.34777 * 119.99828 * 179.72339 * 15 14 12 17 17 O 1.21663 * 119.99994 * 0.28051 * 16 15 14 18 18 C 1.47050 * 120.00147 * 180.27728 * 16 15 14 19 19 C 1.36221 * 123.49398 * 180.02562 * 18 16 15 20 20 Cl 1.73607 * 124.60471 * 0.02562 * 19 18 16 21 21 S 1.70442 * 110.79224 * 180.02562 * 19 18 16 22 22 C 1.75497 * 92.46365 * 359.97438 * 21 19 18 23 23 C 1.50698 * 124.68499 * 179.97438 * 22 21 19 24 24 O 1.42909 * 109.47113 * 119.97509 * 23 22 21 25 25 Si 1.86300 * 109.47147 * 359.97438 * 23 22 21 26 26 C 1.32695 * 110.62836 * 359.71350 * 22 21 19 27 27 C 1.53780 * 87.17279 * 25.36290 * 12 11 9 28 28 H 1.09002 * 109.47250 * 299.99816 * 1 2 3 29 29 H 1.08997 * 109.47522 * 60.00083 * 1 2 3 30 30 H 1.09004 * 109.46784 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47553 * 179.97438 * 3 2 1 32 32 H 1.08997 * 109.46902 * 300.00297 * 3 2 1 33 33 H 1.09002 * 109.46955 * 60.00004 * 3 2 1 34 34 H 1.09001 * 109.46450 * 300.00110 * 4 2 1 35 35 H 1.08997 * 109.46926 * 59.99310 * 4 2 1 36 36 H 1.08993 * 109.47679 * 180.02562 * 4 2 1 37 37 H 0.96998 * 120.00151 * 359.97438 * 8 6 5 38 38 H 1.09008 * 113.66394 * 334.65900 * 11 9 8 39 39 H 1.09003 * 113.61388 * 203.71544 * 11 9 8 40 40 H 1.09004 * 109.47066 * 325.86358 * 14 12 11 41 41 H 1.08994 * 109.46974 * 205.86505 * 14 12 11 42 42 H 0.97001 * 120.00384 * 0.02562 * 15 14 12 43 43 H 1.08998 * 109.47207 * 239.97273 * 23 22 21 44 44 H 0.96702 * 113.99851 * 180.02562 * 24 23 22 45 45 H 1.48501 * 109.99488 * 298.67462 * 25 23 22 46 46 H 1.48491 * 110.00161 * 59.99650 * 25 23 22 47 47 H 1.08000 * 123.44982 * 180.25033 * 26 22 21 48 48 H 1.08996 * 113.61539 * 89.15704 * 27 12 11 49 49 H 1.09005 * 113.61543 * 219.97654 * 27 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0141 -0.6844 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9517 -2.5097 0.5036 8 7 2.0673 -2.6653 2.4171 9 6 1.6742 -4.0668 2.5831 10 1 0.7602 -4.3167 2.0443 11 6 2.8255 -5.0608 2.3451 12 6 3.1495 -4.9202 3.8417 13 9 4.0428 -3.8819 4.1266 14 6 3.5393 -6.2396 4.5110 15 7 4.9740 -6.4741 4.3295 16 6 5.5463 -7.5807 4.8436 17 8 4.8704 -8.3876 5.4539 18 6 6.9875 -7.8131 4.6667 19 6 7.6383 -8.9056 5.1551 20 17 6.8816 -10.1843 6.0530 21 16 9.2964 -8.8467 4.7648 22 6 9.1213 -7.3173 3.9221 23 6 10.2477 -6.5734 3.2523 24 8 9.9607 -6.4272 1.8600 25 14 11.8338 -7.5278 3.4625 26 6 7.8589 -6.9094 3.9513 27 6 1.6744 -4.5374 4.0472 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 3.1300 1.4427 0.0005 32 1 1.6766 1.9564 -0.8899 33 1 1.6766 1.9564 0.8900 34 1 1.6767 -1.7488 -1.2492 35 1 1.6767 -0.2074 -2.1392 36 1 3.1300 -0.7216 -1.2490 37 1 2.6269 -2.2364 3.0833 38 1 3.6078 -4.6756 1.6909 39 1 2.4896 -6.0586 2.0628 40 1 2.9776 -7.0566 4.0581 41 1 3.3113 -6.1882 5.5756 42 1 5.5129 -5.8306 3.8432 43 1 10.3535 -5.5883 3.7069 44 1 10.6450 -5.9566 1.3646 45 1 12.1601 -7.6589 4.9053 46 1 11.7026 -8.8727 2.8471 47 1 7.5185 -5.9935 3.4912 48 1 1.0231 -5.3919 4.2312 49 1 1.5285 -3.7314 4.7664 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15774724_13431040.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:41 Heat of formation + Delta-G solvation = -131.728634 kcal Electronic energy + Delta-G solvation = -36076.410647 eV Core-core repulsion = 30880.775220 eV Total energy + Delta-G solvation = -5195.635427 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.100 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -49.03724 -41.79430 -41.00502 -39.99094 -38.86680 -37.96375 -37.75750 -37.07748 -35.87076 -35.16659 -33.83497 -31.89580 -29.52623 -28.33280 -28.29515 -27.30791 -26.95992 -25.76148 -24.23946 -22.97692 -22.10338 -21.12485 -20.99597 -20.51406 -19.37339 -19.22794 -18.62166 -18.28870 -17.61273 -17.33116 -17.18565 -16.95677 -16.77228 -16.45349 -16.41965 -16.08458 -15.96030 -15.53293 -15.45071 -15.32435 -15.00828 -14.84102 -14.54218 -14.47928 -14.38848 -14.27167 -14.22001 -13.94999 -13.62151 -13.41241 -13.22944 -13.20884 -13.05104 -12.91685 -12.84877 -12.83421 -12.49754 -12.44040 -12.38681 -12.25780 -12.21411 -11.98149 -11.77267 -11.51875 -11.30895 -10.99830 -10.85752 -10.62181 -10.30093 -10.22391 -9.88392 -9.70547 -5.42611 -0.61556 -0.18246 0.41426 0.67355 0.99168 1.07841 1.10858 1.41808 1.72270 1.82171 2.01495 2.23801 2.81179 2.89881 3.00489 3.06132 3.09759 3.38863 3.46146 3.50878 3.76877 3.82640 3.83727 3.85630 3.96504 4.13563 4.18885 4.21493 4.33633 4.35039 4.41705 4.50085 4.56080 4.58919 4.62639 4.67056 4.67714 4.74306 4.77747 4.79508 4.88791 4.89117 4.92482 5.08273 5.22026 5.28150 5.35817 5.44751 5.58783 6.33753 6.36685 6.36705 7.12565 7.38828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.140 3.860 10 H 0.120 0.880 11 C -0.168 4.168 12 C 0.078 3.922 13 F -0.183 7.183 14 C 0.115 3.885 15 N -0.722 5.722 16 C 0.580 3.420 17 O -0.517 6.517 18 C -0.159 4.159 19 C -0.110 4.110 20 Cl 0.028 6.972 21 S 0.217 5.783 22 C -0.190 4.190 23 C -0.034 4.034 24 O -0.542 6.542 25 Si 0.670 3.330 26 C -0.065 4.065 27 C -0.155 4.155 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.087 0.913 31 H 0.067 0.933 32 H 0.082 0.918 33 H 0.067 0.933 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.060 0.940 37 H 0.410 0.590 38 H 0.089 0.911 39 H 0.117 0.883 40 H 0.093 0.907 41 H 0.084 0.916 42 H 0.404 0.596 43 H 0.089 0.911 44 H 0.387 0.613 45 H -0.235 1.235 46 H -0.232 1.232 47 H 0.159 0.841 48 H 0.123 0.877 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.699 4.917 -1.997 7.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.035 3.965 10 H 0.138 0.862 11 C -0.207 4.207 12 C 0.059 3.941 13 F -0.164 7.164 14 C -0.009 4.009 15 N -0.375 5.375 16 C 0.365 3.635 17 O -0.393 6.393 18 C -0.178 4.178 19 C -0.257 4.257 20 Cl 0.057 6.943 21 S 0.481 5.519 22 C -0.306 4.306 23 C -0.148 4.148 24 O -0.349 6.349 25 Si 0.569 3.431 26 C -0.095 4.095 27 C -0.194 4.194 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.106 0.894 31 H 0.086 0.914 32 H 0.101 0.899 33 H 0.086 0.914 34 H 0.106 0.894 35 H 0.091 0.909 36 H 0.079 0.921 37 H 0.246 0.754 38 H 0.108 0.892 39 H 0.135 0.865 40 H 0.112 0.888 41 H 0.102 0.898 42 H 0.240 0.760 43 H 0.107 0.893 44 H 0.236 0.764 45 H -0.158 1.158 46 H -0.155 1.155 47 H 0.176 0.824 48 H 0.142 0.858 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 4.844 2.051 -1.128 5.380 hybrid contribution -1.133 1.663 0.005 2.012 sum 3.712 3.714 -1.124 5.370 Atomic orbital electron populations 1.22525 0.93798 1.05059 1.02762 1.22137 0.94474 0.91572 0.81799 1.21883 1.02360 0.92317 1.03366 1.22522 1.01623 1.03447 0.96541 1.86316 1.71403 1.23295 1.46795 1.18038 0.78538 0.80631 0.81995 1.90921 1.40886 1.70516 1.42942 1.44389 1.55547 1.11436 1.24110 1.21771 0.99033 0.78878 0.96792 0.86188 1.24254 0.99943 1.01966 0.94498 1.22252 0.89225 0.85006 0.97585 1.92863 1.69475 1.59525 1.94513 1.21804 0.81803 0.95128 1.02156 1.45615 1.09644 1.24212 1.58076 1.17333 0.85810 0.81364 0.78987 1.90889 1.63534 1.44567 1.40303 1.20153 0.95278 0.96229 1.06121 1.25561 0.99901 0.96553 1.03659 1.98438 1.80113 1.44920 1.70841 1.83440 1.01257 1.17648 1.49585 1.23389 0.98605 1.00157 1.08481 1.23971 1.02524 1.03469 0.84788 1.86504 1.49817 1.81005 1.17552 0.94650 0.81872 0.82356 0.84249 1.20980 0.90908 0.99885 0.97686 1.23988 0.94317 1.03781 0.97311 0.92095 0.90882 0.89424 0.91371 0.89888 0.91375 0.89426 0.90886 0.92103 0.75412 0.89200 0.86508 0.88845 0.89767 0.76045 0.89295 0.76433 1.15824 1.15476 0.82392 0.85833 0.88644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 2 C 0.14 0.16 1.13 -90.62 -0.10 0.06 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.21 8.37 37.16 0.31 0.10 16 5 O -0.36 -0.86 9.94 -40.33 -0.40 -1.27 16 6 C 0.65 1.68 8.06 54.06 0.44 2.12 16 7 O -0.56 -2.60 11.48 -19.28 -0.22 -2.82 16 8 N -0.70 0.06 5.19 -57.84 -0.30 -0.24 16 9 C 0.14 -0.23 4.33 -67.03 -0.29 -0.52 16 10 H 0.12 -0.10 7.46 -51.93 -0.39 -0.49 16 11 C -0.17 0.40 7.33 -25.83 -0.19 0.21 16 12 C 0.08 -0.18 1.71 -89.81 -0.15 -0.34 16 13 F -0.18 0.14 15.57 2.25 0.04 0.17 16 14 C 0.12 -0.14 5.41 -4.04 -0.02 -0.16 16 15 N -0.72 -0.11 5.43 -61.50 -0.33 -0.44 16 16 C 0.58 1.88 7.79 -12.69 -0.10 1.78 16 17 O -0.52 -3.21 14.91 5.22 0.08 -3.14 16 18 C -0.16 -0.43 5.98 -104.59 -0.63 -1.06 16 19 C -0.11 -0.37 6.87 30.01 0.21 -0.16 16 20 Cl 0.03 0.12 27.20 -51.86 -1.41 -1.29 16 21 S 0.22 0.36 20.17 -107.50 -2.17 -1.81 16 22 C -0.19 -0.13 5.72 -36.20 -0.21 -0.33 16 23 C -0.03 0.07 2.94 36.00 0.11 0.18 16 24 O -0.54 1.05 12.82 -35.23 -0.45 0.60 16 25 Si 0.67 -1.75 30.91 -169.99 -5.25 -7.00 16 26 C -0.07 -0.04 9.71 -39.00 -0.38 -0.42 16 27 C -0.16 0.53 7.28 -25.92 -0.19 0.34 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.41 -0.42 7.88 -40.82 -0.32 -0.74 16 38 H 0.09 -0.12 8.14 -51.92 -0.42 -0.54 16 39 H 0.12 -0.41 7.92 -51.93 -0.41 -0.82 16 40 H 0.09 -0.15 7.88 -51.93 -0.41 -0.56 16 41 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.40 -0.57 6.62 -40.82 -0.27 -0.84 16 43 H 0.09 -0.36 7.96 -51.93 -0.41 -0.78 16 44 H 0.39 -2.67 8.74 45.56 0.40 -2.27 16 45 H -0.23 0.12 7.11 56.52 0.40 0.52 16 46 H -0.23 -0.10 7.11 56.52 0.40 0.31 16 47 H 0.16 -0.25 7.10 -52.49 -0.37 -0.63 16 48 H 0.12 -0.63 8.10 -51.93 -0.42 -1.05 16 49 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 LS Contribution 430.51 15.07 6.49 6.49 Total: 0.00 -9.58 430.51 -11.14 -20.72 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -6.64 Total: -12.33 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -0.56 Total: 2.35 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.63 Total: -0.67 kcal Atomic # 8 Polarization: -5.63 SS G_CDS: -1.00 Total: -6.62 kcal Atomic # 9 Polarization: 0.14 SS G_CDS: 0.04 Total: 0.17 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.25 Total: -7.00 kcal Atomic # 16 Polarization: 0.36 SS G_CDS: -2.17 Total: -1.81 kcal Atomic # 17 Polarization: 0.12 SS G_CDS: -1.41 Total: -1.29 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -9.58 -11.14 -20.72 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13431040.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.010 kcal (2) G-P(sol) polarization free energy of solvation -9.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.140 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.718 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds