Wall clock time and date at job start Sun Mar 7 2021 08:24:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46997 * 2 1 4 4 C 1.52998 * 109.47021 * 239.99781 * 2 1 3 5 5 O 1.45205 * 109.46911 * 119.99874 * 2 1 3 6 6 C 1.34636 * 116.99806 * 60.00322 * 5 2 1 7 7 O 1.21513 * 120.00153 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99531 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99665 * 179.72227 * 8 6 5 10 10 H 1.09002 * 112.85201 * 24.08188 * 9 8 6 11 11 C 1.53784 * 113.61491 * 155.28109 * 9 8 6 12 12 C 1.53777 * 87.08172 * 89.11442 * 11 9 8 13 13 F 1.39901 * 113.61523 * 270.88390 * 12 11 9 14 14 C 1.53000 * 113.61078 * 139.98329 * 12 11 9 15 15 N 1.46499 * 109.47034 * 180.02562 * 14 12 11 16 16 C 1.34777 * 120.00405 * 180.02562 * 15 14 12 17 17 O 1.21617 * 119.99415 * 359.97438 * 16 15 14 18 18 C 1.47379 * 120.00534 * 179.97438 * 16 15 14 19 19 C 1.36408 * 127.18845 * 0.02562 * 18 16 15 20 20 O 1.33658 * 108.39576 * 179.97438 * 19 18 16 21 21 C 1.34213 * 110.90630 * 359.97438 * 20 19 18 22 22 C 1.50700 * 125.43468 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.46947 * 119.97416 * 22 21 20 24 24 Si 1.86304 * 109.47459 * 359.97438 * 22 21 20 25 25 C 1.34170 * 109.12445 * 359.74948 * 21 20 19 26 26 C 1.53777 * 87.08146 * 25.43581 * 12 11 9 27 27 H 1.08999 * 109.46874 * 299.99879 * 1 2 3 28 28 H 1.08996 * 109.47160 * 59.99677 * 1 2 3 29 29 H 1.08994 * 109.47124 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47127 * 179.97438 * 3 2 1 31 31 H 1.09001 * 109.46984 * 299.99604 * 3 2 1 32 32 H 1.08999 * 109.47210 * 60.00327 * 3 2 1 33 33 H 1.09000 * 109.47347 * 300.00334 * 4 2 1 34 34 H 1.09001 * 109.46931 * 59.99857 * 4 2 1 35 35 H 1.09004 * 109.46918 * 179.97438 * 4 2 1 36 36 H 0.97001 * 120.00485 * 0.02562 * 8 6 5 37 37 H 1.08999 * 113.61037 * 203.66621 * 11 9 8 38 38 H 1.09001 * 113.61313 * 334.56329 * 11 9 8 39 39 H 1.09006 * 109.47456 * 299.99661 * 14 12 11 40 40 H 1.09001 * 109.47658 * 59.99930 * 14 12 11 41 41 H 0.96998 * 120.00186 * 359.97438 * 15 14 12 42 42 H 1.08002 * 125.80563 * 359.96320 * 19 18 16 43 43 H 1.08998 * 109.47540 * 239.97496 * 22 21 20 44 44 H 0.96695 * 114.00320 * 299.99957 * 23 22 21 45 45 H 1.48497 * 109.99874 * 58.67544 * 24 22 21 46 46 H 1.48493 * 110.00061 * 180.02562 * 24 22 21 47 47 H 1.08004 * 127.02132 * 180.26510 * 25 21 20 48 48 H 1.08999 * 113.61239 * 220.01646 * 26 12 11 49 49 H 1.08999 * 113.61926 * 89.11880 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5040 8 7 2.0680 -2.6657 2.4167 9 6 1.6694 -4.0652 2.5860 10 1 1.4171 -4.5505 1.6431 11 6 2.6384 -4.8805 3.4585 12 6 1.7969 -4.4390 4.6676 13 9 2.2223 -3.2336 5.2363 14 6 1.5857 -5.5446 5.7038 15 7 0.7763 -5.0286 6.8105 16 6 0.4615 -5.8310 7.8466 17 8 0.8490 -6.9837 7.8625 18 6 -0.3523 -5.3117 8.9602 19 6 -0.8614 -4.0531 9.0924 20 8 -1.5393 -3.9911 10.2427 21 6 -1.5010 -5.1687 10.8853 22 6 -2.1556 -5.4626 12.2105 23 8 -3.1024 -6.5208 12.0498 24 14 -3.0292 -3.9357 12.8239 25 6 -0.7911 -6.0439 10.1572 26 6 0.6205 -4.2777 3.6904 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6766 -1.7489 -1.2492 34 1 1.6766 -0.2075 -2.1392 35 1 3.1300 -0.7209 -1.2494 36 1 2.6276 -2.2368 3.0830 37 1 2.6002 -5.9530 3.2682 38 1 3.6549 -4.4870 3.4669 39 1 1.0706 -6.3851 5.2386 40 1 2.5521 -5.8760 6.0837 41 1 0.4675 -4.1092 6.7979 42 1 -0.7377 -3.2442 8.3876 43 1 -1.3959 -5.7613 12.9328 44 1 -3.8091 -6.3240 11.4199 45 1 -4.0458 -3.4996 11.8332 46 1 -3.6783 -4.2123 14.1305 47 1 -0.5825 -7.0750 10.4017 48 1 0.0080 -3.3976 3.8859 49 1 0.0306 -5.1855 3.5635 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15774724_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:45 Heat of formation + Delta-G solvation = -145.485754 kcal Electronic energy + Delta-G solvation = -33762.248090 eV Core-core repulsion = 28801.745223 eV Total energy + Delta-G solvation = -4960.502867 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.167 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -49.08692 -43.76067 -41.82732 -40.60470 -39.89774 -38.19159 -37.82349 -35.93380 -35.20837 -34.12920 -33.74036 -31.96667 -29.31364 -28.35454 -28.31920 -27.35466 -26.72529 -25.28120 -24.09227 -23.01616 -22.31531 -21.23774 -21.14572 -20.63451 -19.58703 -19.25502 -18.07806 -17.68830 -17.62275 -17.51354 -17.41747 -17.17508 -17.06000 -16.55368 -16.47744 -16.25622 -16.01565 -15.74412 -15.58699 -15.47616 -15.34198 -14.62948 -14.61380 -14.43947 -14.18450 -13.99403 -13.95974 -13.78195 -13.63434 -13.43363 -13.27384 -13.23845 -12.98399 -12.95638 -12.87683 -12.85763 -12.42014 -12.28423 -12.11277 -11.85607 -11.56924 -11.33604 -11.14621 -11.02882 -10.95632 -10.79887 -10.34363 -10.27812 -9.84887 -5.02730 0.18045 0.84182 1.07492 1.10201 1.43854 1.67491 1.78099 1.86316 1.90379 2.28458 2.76109 2.85109 2.96026 3.03962 3.09536 3.34008 3.34247 3.45098 3.53216 3.74513 3.80252 3.86670 3.94144 4.12876 4.16015 4.25936 4.28727 4.33740 4.38279 4.46036 4.53186 4.54199 4.55262 4.60423 4.61976 4.70604 4.74907 4.75435 4.75631 4.86741 4.90089 5.06113 5.13162 5.20216 5.23921 5.33269 5.41752 5.55909 5.77849 6.19565 6.28831 6.33158 7.09275 7.35519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.140 3.860 10 H 0.120 0.880 11 C -0.155 4.155 12 C 0.078 3.922 13 F -0.183 7.183 14 C 0.115 3.885 15 N -0.727 5.727 16 C 0.590 3.410 17 O -0.529 6.529 18 C -0.239 4.239 19 C 0.034 3.966 20 O -0.165 6.165 21 C -0.056 4.056 22 C -0.035 4.035 23 O -0.520 6.520 24 Si 0.705 3.295 25 C -0.122 4.122 26 C -0.168 4.168 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.410 0.590 37 H 0.124 0.876 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.084 0.916 41 H 0.401 0.599 42 H 0.214 0.786 43 H 0.138 0.862 44 H 0.381 0.619 45 H -0.256 1.256 46 H -0.249 1.249 47 H 0.163 0.837 48 H 0.089 0.911 49 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.841 4.712 -0.629 4.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.035 3.965 10 H 0.138 0.862 11 C -0.194 4.194 12 C 0.059 3.941 13 F -0.163 7.163 14 C -0.009 4.009 15 N -0.379 5.379 16 C 0.378 3.622 17 O -0.406 6.406 18 C -0.243 4.243 19 C -0.036 4.036 20 O -0.061 6.061 21 C -0.104 4.104 22 C -0.145 4.145 23 O -0.326 6.326 24 Si 0.604 3.396 25 C -0.142 4.142 26 C -0.207 4.207 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.246 0.754 37 H 0.142 0.858 38 H 0.114 0.886 39 H 0.112 0.888 40 H 0.103 0.897 41 H 0.236 0.764 42 H 0.230 0.770 43 H 0.156 0.844 44 H 0.229 0.771 45 H -0.181 1.181 46 H -0.173 1.173 47 H 0.180 0.820 48 H 0.107 0.893 49 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 0.248 4.022 -0.297 4.040 hybrid contribution -0.289 -0.036 -0.605 0.672 sum -0.041 3.986 -0.903 4.087 Atomic orbital electron populations 1.22521 0.93812 1.05032 1.02752 1.22143 0.94464 0.91588 0.81793 1.21883 1.02383 0.92293 1.03370 1.22526 1.01653 1.03429 0.96538 1.86317 1.71444 1.23238 1.46780 1.18042 0.78571 0.80711 0.81880 1.90924 1.40774 1.70379 1.43205 1.44387 1.55458 1.11678 1.23974 1.21732 0.94652 0.80123 0.99984 0.86188 1.23988 1.00040 1.02854 0.92505 1.22245 0.97770 0.81747 0.92355 1.92868 1.90896 1.46449 1.86133 1.21796 0.97214 0.95410 0.86476 1.45633 1.55384 1.15564 1.21368 1.17232 0.79031 0.85157 0.80753 1.90834 1.53659 1.17432 1.78667 1.21464 1.08347 0.95248 0.99246 1.24484 0.93824 0.98119 0.87218 1.83694 1.58586 1.34746 1.29034 1.22690 1.05633 0.83871 0.98256 1.24386 0.96264 1.01679 0.92149 1.86681 1.39832 1.39654 1.66449 0.94426 0.84629 0.79937 0.80638 1.22531 0.98482 1.00865 0.92342 1.24221 0.96865 1.05113 0.94502 0.92124 0.90876 0.89440 0.91352 0.89878 0.91375 0.89428 0.90879 0.92073 0.75392 0.85806 0.88597 0.88842 0.89735 0.76392 0.77003 0.84444 0.77093 1.18058 1.17299 0.81965 0.89256 0.86508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.15 8.37 37.16 0.31 0.16 16 2 C 0.14 0.12 1.13 -90.62 -0.10 0.02 16 3 C -0.14 0.15 8.85 37.16 0.33 0.48 16 4 C -0.18 -0.16 8.37 37.16 0.31 0.15 16 5 O -0.36 -0.72 9.94 -40.31 -0.40 -1.13 16 6 C 0.65 1.39 8.06 54.06 0.44 1.83 16 7 O -0.56 -2.38 11.48 -19.28 -0.22 -2.60 16 8 N -0.70 0.45 5.19 -57.93 -0.30 0.15 16 9 C 0.14 -0.32 4.32 -67.12 -0.29 -0.61 16 10 H 0.12 -0.17 7.47 -51.93 -0.39 -0.55 16 11 C -0.16 0.63 7.28 -25.92 -0.19 0.44 16 12 C 0.08 -0.25 1.66 -89.81 -0.15 -0.40 16 13 F -0.18 0.30 15.71 2.25 0.04 0.33 16 14 C 0.12 -0.24 5.37 -4.04 -0.02 -0.26 16 15 N -0.73 0.93 5.46 -61.39 -0.34 0.60 16 16 C 0.59 1.24 7.81 -12.54 -0.10 1.14 16 17 O -0.53 -3.26 16.98 5.26 0.09 -3.17 16 18 C -0.24 -0.22 6.31 -103.28 -0.65 -0.88 16 19 C 0.03 -0.06 11.61 30.07 0.35 0.29 16 20 O -0.16 0.10 8.89 7.65 0.07 0.17 16 21 C -0.06 -0.01 6.20 -35.74 -0.22 -0.23 16 22 C -0.04 0.03 2.98 36.01 0.11 0.14 16 23 O -0.52 -0.21 12.86 -35.23 -0.45 -0.66 16 24 Si 0.70 -1.12 32.09 -169.99 -5.45 -6.58 16 25 C -0.12 -0.20 10.87 -37.46 -0.41 -0.61 16 26 C -0.17 0.55 7.32 -25.92 -0.19 0.36 16 27 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.09 0.25 5.88 -51.93 -0.31 -0.06 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.09 0.25 5.88 -51.93 -0.31 -0.06 16 34 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 35 H 0.06 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.41 -0.65 7.88 -40.82 -0.32 -0.97 16 37 H 0.12 -0.70 8.10 -51.93 -0.42 -1.12 16 38 H 0.10 -0.37 8.14 -51.93 -0.42 -0.80 16 39 H 0.09 -0.22 7.94 -51.93 -0.41 -0.64 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.40 -1.42 7.16 -40.82 -0.29 -1.71 16 42 H 0.21 -1.29 7.47 -52.49 -0.39 -1.69 16 43 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 44 H 0.38 -0.93 8.70 45.56 0.40 -0.54 16 45 H -0.26 -0.24 7.11 56.52 0.40 0.17 16 46 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 47 H 0.16 0.35 8.06 -52.48 -0.42 -0.08 16 48 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 49 H 0.12 -0.51 7.96 -51.93 -0.41 -0.92 16 LS Contribution 411.22 15.07 6.20 6.20 Total: 0.00 -10.32 411.22 -8.37 -18.69 By element: Atomic # 1 Polarization: -6.90 SS G_CDS: -7.12 Total: -14.02 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -0.48 Total: 2.02 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -0.64 Total: 0.75 kcal Atomic # 8 Polarization: -6.47 SS G_CDS: -0.92 Total: -7.39 kcal Atomic # 9 Polarization: 0.30 SS G_CDS: 0.04 Total: 0.33 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.45 Total: -6.58 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.32 -8.37 -18.69 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.794 kcal (2) G-P(sol) polarization free energy of solvation -10.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.116 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds