Wall clock time and date at job start Sun Mar 7 2021 08:24:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46997 * 2 1 4 4 C 1.52998 * 109.47021 * 239.99781 * 2 1 3 5 5 O 1.45205 * 109.46911 * 119.99874 * 2 1 3 6 6 C 1.34636 * 116.99806 * 60.00322 * 5 2 1 7 7 O 1.21513 * 120.00153 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99531 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99665 * 179.72227 * 8 6 5 10 10 H 1.09002 * 112.85201 * 24.08188 * 9 8 6 11 11 C 1.53784 * 113.61491 * 155.28109 * 9 8 6 12 12 C 1.53777 * 87.08172 * 89.11442 * 11 9 8 13 13 F 1.39901 * 113.61523 * 270.88390 * 12 11 9 14 14 C 1.53000 * 113.61078 * 139.98329 * 12 11 9 15 15 N 1.46499 * 109.47034 * 180.02562 * 14 12 11 16 16 C 1.34777 * 120.00405 * 180.02562 * 15 14 12 17 17 O 1.21617 * 119.99415 * 359.97438 * 16 15 14 18 18 C 1.47379 * 120.00534 * 179.97438 * 16 15 14 19 19 C 1.36408 * 127.18845 * 0.02562 * 18 16 15 20 20 O 1.33658 * 108.39576 * 179.97438 * 19 18 16 21 21 C 1.34213 * 110.90630 * 359.97438 * 20 19 18 22 22 C 1.50700 * 125.43468 * 179.97438 * 21 20 19 23 23 O 1.42903 * 109.46947 * 119.97416 * 22 21 20 24 24 Si 1.86304 * 109.47459 * 359.97438 * 22 21 20 25 25 C 1.34170 * 109.12445 * 359.74948 * 21 20 19 26 26 C 1.53777 * 87.08146 * 25.43581 * 12 11 9 27 27 H 1.08999 * 109.46874 * 299.99879 * 1 2 3 28 28 H 1.08996 * 109.47160 * 59.99677 * 1 2 3 29 29 H 1.08994 * 109.47124 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47127 * 179.97438 * 3 2 1 31 31 H 1.09001 * 109.46984 * 299.99604 * 3 2 1 32 32 H 1.08999 * 109.47210 * 60.00327 * 3 2 1 33 33 H 1.09000 * 109.47347 * 300.00334 * 4 2 1 34 34 H 1.09001 * 109.46931 * 59.99857 * 4 2 1 35 35 H 1.09004 * 109.46918 * 179.97438 * 4 2 1 36 36 H 0.97001 * 120.00485 * 0.02562 * 8 6 5 37 37 H 1.08999 * 113.61037 * 203.66621 * 11 9 8 38 38 H 1.09001 * 113.61313 * 334.56329 * 11 9 8 39 39 H 1.09006 * 109.47456 * 299.99661 * 14 12 11 40 40 H 1.09001 * 109.47658 * 59.99930 * 14 12 11 41 41 H 0.96998 * 120.00186 * 359.97438 * 15 14 12 42 42 H 1.08002 * 125.80563 * 359.96320 * 19 18 16 43 43 H 1.08998 * 109.47540 * 239.97496 * 22 21 20 44 44 H 0.96695 * 114.00320 * 299.99957 * 23 22 21 45 45 H 1.48497 * 109.99874 * 58.67544 * 24 22 21 46 46 H 1.48493 * 110.00061 * 180.02562 * 24 22 21 47 47 H 1.08004 * 127.02132 * 180.26510 * 25 21 20 48 48 H 1.08999 * 113.61239 * 220.01646 * 26 12 11 49 49 H 1.08999 * 113.61926 * 89.11880 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5040 8 7 2.0680 -2.6657 2.4167 9 6 1.6694 -4.0652 2.5860 10 1 1.4171 -4.5505 1.6431 11 6 2.6384 -4.8805 3.4585 12 6 1.7969 -4.4390 4.6676 13 9 2.2223 -3.2336 5.2363 14 6 1.5857 -5.5446 5.7038 15 7 0.7763 -5.0286 6.8105 16 6 0.4615 -5.8310 7.8466 17 8 0.8490 -6.9837 7.8625 18 6 -0.3523 -5.3117 8.9602 19 6 -0.8614 -4.0531 9.0924 20 8 -1.5393 -3.9911 10.2427 21 6 -1.5010 -5.1687 10.8853 22 6 -2.1556 -5.4626 12.2105 23 8 -3.1024 -6.5208 12.0498 24 14 -3.0292 -3.9357 12.8239 25 6 -0.7911 -6.0439 10.1572 26 6 0.6205 -4.2777 3.6904 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6766 -1.7489 -1.2492 34 1 1.6766 -0.2075 -2.1392 35 1 3.1300 -0.7209 -1.2494 36 1 2.6276 -2.2368 3.0830 37 1 2.6002 -5.9530 3.2682 38 1 3.6549 -4.4870 3.4669 39 1 1.0706 -6.3851 5.2386 40 1 2.5521 -5.8760 6.0837 41 1 0.4675 -4.1092 6.7979 42 1 -0.7377 -3.2442 8.3876 43 1 -1.3959 -5.7613 12.9328 44 1 -3.8091 -6.3240 11.4199 45 1 -4.0458 -3.4996 11.8332 46 1 -3.6783 -4.2123 14.1305 47 1 -0.5825 -7.0750 10.4017 48 1 0.0080 -3.3976 3.8859 49 1 0.0306 -5.1855 3.5635 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:24:44 Heat of formation + Delta-G solvation = -148.212944 kcal Electronic energy + Delta-G solvation = -33762.366350 eV Core-core repulsion = 28801.745223 eV Total energy + Delta-G solvation = -4960.621127 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.167 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -48.91962 -43.73821 -41.89704 -40.65808 -39.83284 -38.17335 -37.88557 -36.00031 -35.27346 -34.14608 -33.72507 -31.94151 -29.23956 -28.37996 -28.31516 -27.09465 -26.67237 -25.25185 -24.09274 -22.94053 -22.33387 -21.23107 -21.16982 -20.51496 -19.55346 -19.30041 -18.03672 -17.69501 -17.59854 -17.51514 -17.31452 -17.23238 -16.98437 -16.50264 -16.40939 -16.22304 -15.97434 -15.70494 -15.52539 -15.50798 -15.37469 -14.65284 -14.55450 -14.44538 -14.22938 -13.99883 -13.77743 -13.70682 -13.60602 -13.35472 -13.16620 -13.09428 -12.95657 -12.92560 -12.88426 -12.80135 -12.46340 -12.32939 -12.15692 -11.74068 -11.41791 -11.39168 -11.25324 -11.15504 -11.01020 -10.78999 -10.32654 -10.26051 -9.80667 -4.91875 0.22892 0.79391 1.08542 1.18178 1.51562 1.67835 1.74028 1.91284 1.96029 2.20419 2.98330 3.03247 3.06665 3.18754 3.20788 3.47190 3.53644 3.55787 3.64341 3.72599 3.78368 3.92983 3.95233 4.28978 4.30680 4.37938 4.42441 4.48694 4.50658 4.59190 4.60230 4.61249 4.62760 4.75426 4.78026 4.81562 4.85669 4.86375 4.86568 4.87804 4.90322 5.10800 5.12421 5.20308 5.25832 5.28942 5.40152 5.56878 5.80655 6.31319 6.33077 6.34916 7.04748 7.28108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.686 5.686 9 C 0.129 3.871 10 H 0.111 0.889 11 C -0.144 4.144 12 C 0.085 3.915 13 F -0.191 7.191 14 C 0.113 3.887 15 N -0.711 5.711 16 C 0.589 3.411 17 O -0.581 6.581 18 C -0.269 4.269 19 C 0.065 3.935 20 O -0.164 6.164 21 C -0.050 4.050 22 C -0.045 4.045 23 O -0.539 6.539 24 Si 0.790 3.210 25 C -0.149 4.149 26 C -0.160 4.160 27 H 0.062 0.938 28 H 0.086 0.914 29 H 0.065 0.935 30 H 0.069 0.931 31 H 0.098 0.902 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.086 0.914 35 H 0.061 0.939 36 H 0.415 0.585 37 H 0.144 0.856 38 H 0.098 0.902 39 H 0.099 0.901 40 H 0.076 0.924 41 H 0.414 0.586 42 H 0.258 0.742 43 H 0.149 0.851 44 H 0.391 0.609 45 H -0.287 1.287 46 H -0.287 1.287 47 H 0.146 0.854 48 H 0.083 0.917 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.000 6.380 -0.911 6.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.238 4.238 5 O -0.284 6.284 6 C 0.401 3.599 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.025 3.975 10 H 0.129 0.871 11 C -0.182 4.182 12 C 0.066 3.934 13 F -0.171 7.171 14 C -0.010 4.010 15 N -0.364 5.364 16 C 0.378 3.622 17 O -0.462 6.462 18 C -0.274 4.274 19 C -0.006 4.006 20 O -0.060 6.060 21 C -0.099 4.099 22 C -0.153 4.153 23 O -0.347 6.347 24 Si 0.693 3.307 25 C -0.169 4.169 26 C -0.199 4.199 27 H 0.081 0.919 28 H 0.105 0.895 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.252 0.748 37 H 0.161 0.839 38 H 0.116 0.884 39 H 0.117 0.883 40 H 0.095 0.905 41 H 0.251 0.749 42 H 0.274 0.726 43 H 0.167 0.833 44 H 0.241 0.759 45 H -0.213 1.213 46 H -0.214 1.214 47 H 0.164 0.836 48 H 0.102 0.898 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.429 5.723 -0.587 5.769 hybrid contribution -0.370 -0.544 -0.538 0.850 sum 0.060 5.179 -1.125 5.300 Atomic orbital electron populations 1.22469 0.93917 1.03761 1.03528 1.22367 0.94539 0.92541 0.81444 1.21898 1.02452 0.90933 1.04262 1.22479 1.01637 1.02307 0.97331 1.86321 1.71552 1.23244 1.47320 1.18277 0.78530 0.80801 0.82244 1.90911 1.42026 1.70848 1.44256 1.44444 1.54864 1.12089 1.23167 1.21883 0.96071 0.79446 1.00113 0.87132 1.24012 0.99580 1.03703 0.90929 1.22187 0.98139 0.81036 0.91995 1.92857 1.91012 1.46933 1.86303 1.21869 0.96775 0.96037 0.86363 1.45529 1.54449 1.15787 1.20589 1.17435 0.78644 0.84688 0.81385 1.90800 1.55958 1.19611 1.79864 1.21462 1.10078 0.96572 0.99242 1.25249 0.90881 0.97922 0.86527 1.83721 1.58589 1.34241 1.29404 1.22723 1.05049 0.83768 0.98324 1.24691 0.96608 1.02043 0.91951 1.86650 1.40477 1.40653 1.66932 0.93443 0.82427 0.78071 0.76756 1.22554 0.99920 1.00775 0.93682 1.24211 0.96591 1.05501 0.93596 0.91922 0.89492 0.91652 0.91233 0.88292 0.91172 0.91644 0.89474 0.91976 0.74793 0.83850 0.88373 0.88292 0.90539 0.74893 0.72629 0.83350 0.75932 1.21348 1.21408 0.83603 0.89817 0.85152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.34 8.37 71.98 0.60 0.27 16 2 C 0.13 0.23 1.13 -10.79 -0.01 0.22 16 3 C -0.14 0.40 8.85 71.98 0.64 1.04 16 4 C -0.18 -0.38 8.37 71.98 0.60 0.22 16 5 O -0.37 -1.63 9.94 -55.45 -0.55 -2.18 16 6 C 0.65 3.24 8.06 129.79 1.05 4.29 16 7 O -0.59 -5.76 11.48 19.80 0.23 -5.53 16 8 N -0.69 0.76 5.19 -567.60 -2.94 -2.19 16 9 C 0.13 -0.59 4.32 45.52 0.20 -0.40 16 10 H 0.11 -0.25 7.47 -2.39 -0.02 -0.27 16 11 C -0.14 1.27 7.28 31.12 0.23 1.50 16 12 C 0.09 -0.61 1.66 -10.27 -0.02 -0.63 16 13 F -0.19 0.80 15.71 44.97 0.71 1.51 16 14 C 0.11 -0.50 5.37 86.38 0.46 -0.04 16 15 N -0.71 2.15 5.46 -466.40 -2.55 -0.40 16 16 C 0.59 2.87 7.81 86.65 0.68 3.55 16 17 O -0.58 -8.29 16.98 -4.08 -0.07 -8.36 16 18 C -0.27 -0.57 6.31 -18.99 -0.12 -0.69 16 19 C 0.06 -0.34 11.61 67.39 0.78 0.44 16 20 O -0.16 0.39 8.89 4.44 0.04 0.43 16 21 C -0.05 -0.02 6.20 24.76 0.15 0.13 16 22 C -0.04 0.08 2.98 71.24 0.21 0.29 16 23 O -0.54 -0.81 12.86 -148.98 -1.92 -2.72 16 24 Si 0.79 -2.70 32.09 68.60 2.20 -0.50 16 25 C -0.15 -0.69 10.87 23.65 0.26 -0.44 16 26 C -0.16 1.15 7.32 31.12 0.23 1.38 16 27 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 28 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 29 H 0.06 0.45 5.88 -2.39 -0.01 0.43 16 30 H 0.07 -0.20 8.14 -2.38 -0.02 -0.22 16 31 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 32 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 33 H 0.06 0.46 5.88 -2.39 -0.01 0.45 16 34 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 35 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 36 H 0.41 -1.38 7.88 -92.71 -0.73 -2.11 16 37 H 0.14 -1.81 8.10 -2.39 -0.02 -1.83 16 38 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 39 H 0.10 -0.50 7.94 -2.38 -0.02 -0.52 16 40 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 41 H 0.41 -3.53 7.16 -92.71 -0.66 -4.20 16 42 H 0.26 -4.00 7.47 -2.91 -0.02 -4.02 16 43 H 0.15 -0.65 7.96 -2.39 -0.02 -0.67 16 44 H 0.39 -1.64 8.70 -74.06 -0.64 -2.29 16 45 H -0.29 -0.49 7.11 99.48 0.71 0.22 16 46 H -0.29 -0.84 7.11 99.48 0.71 -0.13 16 47 H 0.15 1.05 8.06 -2.91 -0.02 1.03 16 48 H 0.08 -0.46 8.14 -2.39 -0.02 -0.48 16 49 H 0.13 -1.27 7.96 -2.39 -0.02 -1.29 16 Total: 0.00 -26.83 411.22 0.10 -26.73 By element: Atomic # 1 Polarization: -16.95 SS G_CDS: -0.99 Total: -17.93 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 5.94 Total: 11.14 kcal Atomic # 7 Polarization: 2.90 SS G_CDS: -5.49 Total: -2.59 kcal Atomic # 8 Polarization: -16.09 SS G_CDS: -2.27 Total: -18.36 kcal Atomic # 9 Polarization: 0.80 SS G_CDS: 0.71 Total: 1.51 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: 2.20 Total: -0.50 kcal Total: -26.83 0.10 -26.73 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.478 kcal (2) G-P(sol) polarization free energy of solvation -26.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds