Wall clock time and date at job start Sun Mar 7 2021 08:27:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52996 * 109.47645 * 2 1 4 4 C 1.53002 * 109.47184 * 239.99793 * 2 1 3 5 5 O 1.45204 * 109.46930 * 120.00506 * 2 1 3 6 6 C 1.34631 * 117.00254 * 59.99514 * 5 2 1 7 7 O 1.21509 * 120.00193 * 0.02562 * 6 5 2 8 8 N 1.34776 * 119.99992 * 179.97438 * 6 5 2 9 9 C 1.46506 * 120.00233 * 180.02562 * 8 6 5 10 10 H 1.09002 * 112.84530 * 23.80266 * 9 8 6 11 11 C 1.53780 * 113.61659 * 155.00328 * 9 8 6 12 12 C 1.53776 * 87.08107 * 89.11664 * 11 9 8 13 13 F 1.39901 * 113.61299 * 270.79856 * 12 11 9 14 14 C 1.53001 * 113.61427 * 139.98235 * 12 11 9 15 15 N 1.46493 * 109.47171 * 179.97438 * 14 12 11 16 16 C 1.34779 * 120.00038 * 179.97438 * 15 14 12 17 17 O 1.21694 * 119.99887 * 0.02562 * 16 15 14 18 18 C 1.46674 * 120.00144 * 180.02562 * 16 15 14 19 19 C 1.37874 * 126.23565 * 180.02562 * 18 16 15 20 20 C 1.39834 * 107.08769 * 180.02562 * 19 18 16 21 21 C 1.35452 * 107.86423 * 0.02562 * 20 19 18 22 22 C 1.50693 * 125.56211 * 180.02562 * 21 20 19 23 23 O 1.42907 * 109.47661 * 120.02479 * 22 21 20 24 24 Si 1.86298 * 109.47618 * 0.02562 * 22 21 20 25 25 N 1.35527 * 108.87138 * 0.26071 * 21 20 19 26 26 C 1.53779 * 87.08324 * 25.43210 * 12 11 9 27 27 H 1.09002 * 109.47093 * 299.99928 * 1 2 3 28 28 H 1.09005 * 109.47298 * 59.99827 * 1 2 3 29 29 H 1.09003 * 109.47318 * 179.97438 * 1 2 3 30 30 H 1.08992 * 109.47625 * 179.97438 * 3 2 1 31 31 H 1.08995 * 109.46887 * 300.00287 * 3 2 1 32 32 H 1.09002 * 109.46816 * 59.99903 * 3 2 1 33 33 H 1.09003 * 109.47437 * 300.00471 * 4 2 1 34 34 H 1.09007 * 109.47193 * 60.00128 * 4 2 1 35 35 H 1.08998 * 109.47411 * 180.02562 * 4 2 1 36 36 H 0.97003 * 120.00403 * 0.02562 * 8 6 5 37 37 H 1.09005 * 113.60779 * 334.56562 * 11 9 8 38 38 H 1.08999 * 113.69082 * 203.68146 * 11 9 8 39 39 H 1.09003 * 109.47208 * 59.99693 * 14 12 11 40 40 H 1.09003 * 109.47005 * 300.00048 * 14 12 11 41 41 H 0.97000 * 120.00519 * 0.02562 * 15 14 12 42 42 H 1.07999 * 126.45517 * 0.02562 * 19 18 16 43 43 H 1.08000 * 126.06973 * 180.02562 * 20 19 18 44 44 H 1.09000 * 109.46936 * 240.02102 * 22 21 20 45 45 H 0.96697 * 114.00527 * 179.97438 * 23 22 21 46 46 H 1.48506 * 109.99834 * 298.68714 * 24 22 21 47 47 H 1.48502 * 110.00011 * 59.99978 * 24 22 21 48 48 H 0.97009 * 125.67766 * 179.70049 * 25 21 20 49 49 H 1.09001 * 113.61486 * 89.11413 * 26 12 11 50 50 H 1.09000 * 113.61563 * 220.01785 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0139 -0.6846 1.1855 6 6 1.6521 -1.9724 1.3383 7 8 0.9514 -2.5097 0.5035 8 7 2.0679 -2.6658 2.4166 9 6 1.6747 -4.0673 2.5826 10 1 1.4222 -4.5506 1.6387 11 6 2.6483 -4.8817 3.4507 12 6 1.8076 -4.4468 4.6627 13 9 2.2310 -3.2426 5.2353 14 6 1.6024 -5.5563 5.6961 15 7 0.7944 -5.0460 6.8064 16 6 0.4838 -5.8529 7.8403 17 8 0.8750 -7.0052 7.8518 18 6 -0.3257 -5.3423 8.9518 19 6 -0.7166 -6.0507 10.0681 20 6 -1.4705 -5.1818 10.8631 21 6 -1.5262 -3.9844 10.2322 22 6 -2.2399 -2.7584 10.7406 23 8 -1.3005 -1.6941 10.9051 24 14 -3.0393 -3.1398 12.3795 25 7 -0.8397 -4.0705 9.0669 26 6 0.6287 -4.2868 3.6883 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9562 -0.8899 32 1 1.6767 1.9562 0.8900 33 1 1.6766 -1.7490 -1.2493 34 1 1.6767 -0.2075 -2.1393 35 1 3.1300 -0.7217 -1.2490 36 1 2.6275 -2.2370 3.0828 37 1 3.6633 -4.4845 3.4582 38 1 2.6148 -5.9540 3.2582 39 1 2.5708 -5.8853 6.0731 40 1 1.0895 -6.3972 5.2293 41 1 0.4822 -4.1277 6.7972 42 1 -0.4843 -7.0824 10.2873 43 1 -1.9272 -5.4225 11.8116 44 1 -3.0050 -2.4600 10.0238 45 1 -1.6911 -0.8714 11.2301 46 1 -4.0414 -4.2235 12.2159 47 1 -2.0066 -3.5479 13.3656 48 1 -0.7273 -3.3544 8.4222 49 1 0.0419 -5.1964 3.5599 50 1 0.0134 -3.4095 3.8877 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_6580494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:27:00 Heat of formation + Delta-G solvation = -123.526317 kcal Electronic energy + Delta-G solvation = -33960.159264 eV Core-core repulsion = 29098.327291 eV Total energy + Delta-G solvation = -4861.831972 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.178 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.99949 -42.65908 -41.93136 -40.54877 -39.85555 -37.92799 -37.65585 -36.12610 -35.31250 -33.95812 -32.44047 -31.73228 -29.38465 -28.40110 -28.33893 -27.16008 -26.69195 -24.73690 -23.36527 -22.86840 -21.71031 -21.43533 -21.21988 -20.72907 -19.84160 -19.35995 -18.47342 -17.72658 -17.57066 -17.34060 -17.17999 -17.09885 -16.63608 -16.45551 -16.19237 -15.96743 -15.67143 -15.55804 -15.40828 -15.26334 -15.06540 -14.86286 -14.56068 -14.44957 -14.37774 -13.90233 -13.80494 -13.72316 -13.55390 -13.38093 -13.19661 -13.15562 -12.95252 -12.90907 -12.84670 -12.74752 -12.49503 -12.35616 -12.05889 -11.84521 -11.47579 -11.44600 -11.35982 -11.18347 -10.51796 -10.45320 -10.32171 -10.27164 -9.41418 -4.94170 0.14136 1.05120 1.17354 1.35082 1.64034 1.74011 1.75719 1.97617 2.08747 2.11589 2.92455 2.99310 3.01259 3.12373 3.28014 3.50645 3.57008 3.66378 3.70219 3.76023 3.79292 3.90662 4.01555 4.14396 4.24550 4.31203 4.38262 4.44227 4.51469 4.56804 4.58049 4.58274 4.73135 4.73422 4.75714 4.77360 4.80466 4.82181 4.84150 4.85095 4.86456 5.04536 5.10672 5.23632 5.26005 5.36180 5.40598 5.53322 5.57623 6.09265 6.27049 6.28020 6.82737 6.85534 7.24305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.648 3.352 7 O -0.588 6.588 8 N -0.687 5.687 9 C 0.131 3.869 10 H 0.113 0.887 11 C -0.142 4.142 12 C 0.081 3.919 13 F -0.194 7.194 14 C 0.112 3.888 15 N -0.716 5.716 16 C 0.594 3.406 17 O -0.563 6.563 18 C -0.063 4.063 19 C -0.114 4.114 20 C -0.231 4.231 21 C 0.069 3.931 22 C -0.064 4.064 23 O -0.566 6.566 24 Si 0.812 3.188 25 N -0.508 5.508 26 C -0.160 4.160 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.065 0.935 30 H 0.068 0.932 31 H 0.099 0.901 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.414 0.586 37 H 0.098 0.902 38 H 0.146 0.854 39 H 0.079 0.921 40 H 0.105 0.895 41 H 0.408 0.592 42 H 0.150 0.850 43 H 0.145 0.855 44 H 0.107 0.893 45 H 0.410 0.590 46 H -0.288 1.288 47 H -0.301 1.301 48 H 0.430 0.570 49 H 0.133 0.867 50 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.933 7.152 -0.611 7.755 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.402 3.598 7 O -0.479 6.479 8 N -0.347 5.347 9 C 0.026 3.974 10 H 0.131 0.869 11 C -0.180 4.180 12 C 0.062 3.938 13 F -0.174 7.174 14 C -0.011 4.011 15 N -0.368 5.368 16 C 0.383 3.617 17 O -0.442 6.442 18 C -0.177 4.177 19 C -0.141 4.141 20 C -0.255 4.255 21 C -0.051 4.051 22 C -0.173 4.173 23 O -0.377 6.377 24 Si 0.716 3.284 25 N -0.105 5.105 26 C -0.199 4.199 27 H 0.080 0.920 28 H 0.106 0.894 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.118 0.882 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.106 0.894 35 H 0.080 0.920 36 H 0.251 0.749 37 H 0.116 0.884 38 H 0.164 0.836 39 H 0.098 0.902 40 H 0.123 0.877 41 H 0.243 0.757 42 H 0.167 0.833 43 H 0.162 0.838 44 H 0.124 0.876 45 H 0.263 0.737 46 H -0.215 1.215 47 H -0.228 1.228 48 H 0.270 0.730 49 H 0.151 0.849 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.653 5.268 -0.861 5.961 hybrid contribution 0.521 0.547 -0.309 0.817 sum -2.132 5.816 -1.170 6.304 Atomic orbital electron populations 1.22473 0.93900 1.03768 1.03545 1.22376 0.94555 0.92542 0.81429 1.21899 1.02451 0.90933 1.04277 1.22480 1.01635 1.02315 0.97311 1.86320 1.71548 1.23258 1.47406 1.18264 0.78542 0.80813 0.82209 1.90909 1.41998 1.70824 1.44168 1.44460 1.54992 1.12017 1.23214 1.21878 0.95966 0.79386 1.00152 0.86878 1.24012 0.99491 1.03888 0.90637 1.22261 0.98428 0.80980 0.92094 1.92854 1.91103 1.47233 1.86210 1.21948 0.96876 0.96210 0.86077 1.45601 1.54701 1.15498 1.20974 1.17023 0.78808 0.84942 0.80956 1.90854 1.55319 1.18696 1.79287 1.20321 1.09866 0.86970 1.00526 1.21426 0.99294 1.00252 0.93129 1.20730 1.08371 0.94027 1.02336 1.20508 0.99997 0.96663 0.87912 1.24682 0.94370 0.86108 1.12168 1.86422 1.36877 1.24270 1.90108 0.94208 0.76952 0.84501 0.72697 1.41879 1.39581 1.10779 1.18247 1.24221 0.96565 1.05456 0.93692 0.91976 0.89395 0.91651 0.91245 0.88204 0.91224 0.91630 0.89394 0.91987 0.74888 0.88373 0.83558 0.90236 0.87682 0.75670 0.83254 0.83785 0.87562 0.73724 1.21505 1.22845 0.72981 0.84934 0.90131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.40 8.37 71.98 0.60 0.20 16 2 C 0.13 0.29 1.13 -10.80 -0.01 0.27 16 3 C -0.14 0.35 8.85 71.98 0.64 0.98 16 4 C -0.18 -0.43 8.37 71.98 0.60 0.17 16 5 O -0.37 -1.88 9.94 -55.40 -0.55 -2.43 16 6 C 0.65 3.66 8.06 129.79 1.05 4.71 16 7 O -0.59 -5.98 11.48 19.81 0.23 -5.75 16 8 N -0.69 0.14 5.19 -567.61 -2.95 -2.81 16 9 C 0.13 -0.51 4.32 45.52 0.20 -0.31 16 10 H 0.11 -0.21 7.46 -2.39 -0.02 -0.23 16 11 C -0.14 1.15 7.28 31.12 0.23 1.38 16 12 C 0.08 -0.47 1.66 -10.27 -0.02 -0.48 16 13 F -0.19 0.38 15.72 44.97 0.71 1.09 16 14 C 0.11 -0.36 5.36 86.38 0.46 0.10 16 15 N -0.72 0.32 5.46 -467.08 -2.55 -2.24 16 16 C 0.59 4.19 7.79 86.45 0.67 4.86 16 17 O -0.56 -8.14 16.88 -4.33 -0.07 -8.21 16 18 C -0.06 -0.41 7.06 40.35 0.28 -0.13 16 19 C -0.11 -1.00 10.65 22.57 0.24 -0.76 16 20 C -0.23 -1.55 9.32 22.01 0.21 -1.34 16 21 C 0.07 0.21 6.51 41.34 0.27 0.48 16 22 C -0.06 0.27 3.07 71.23 0.22 0.49 16 23 O -0.57 2.51 12.86 -148.98 -1.92 0.60 16 24 Si 0.81 -3.72 30.54 68.60 2.10 -1.63 16 25 N -0.51 -0.74 5.99 -171.94 -1.03 -1.77 16 26 C -0.16 0.98 7.33 31.12 0.23 1.20 16 27 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 28 H 0.09 -0.11 8.14 -2.38 -0.02 -0.12 16 29 H 0.06 0.47 5.88 -2.39 -0.01 0.46 16 30 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 32 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 33 H 0.06 0.48 5.88 -2.39 -0.01 0.47 16 34 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 35 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.41 -0.88 7.89 -92.71 -0.73 -1.61 16 37 H 0.10 -0.77 8.14 -2.38 -0.02 -0.79 16 38 H 0.15 -1.80 8.10 -2.39 -0.02 -1.82 16 39 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 40 H 0.11 -0.50 7.94 -2.39 -0.02 -0.52 16 41 H 0.41 -1.76 7.31 -92.71 -0.68 -2.44 16 42 H 0.15 1.26 8.06 -2.91 -0.02 1.24 16 43 H 0.14 0.77 6.17 -2.91 -0.02 0.76 16 44 H 0.11 -1.01 7.96 -2.39 -0.02 -1.03 16 45 H 0.41 -6.18 8.74 -74.06 -0.65 -6.83 16 46 H -0.29 -0.39 7.11 99.48 0.71 0.32 16 47 H -0.30 -1.27 7.11 99.48 0.71 -0.56 16 48 H 0.43 -1.89 8.19 -92.70 -0.76 -2.65 16 49 H 0.13 -1.19 7.96 -2.39 -0.02 -1.21 16 50 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 Total: 0.00 -27.36 412.38 -1.93 -29.29 By element: Atomic # 1 Polarization: -16.22 SS G_CDS: -1.76 Total: -17.98 kcal Atomic # 6 Polarization: 5.96 SS G_CDS: 5.86 Total: 11.83 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -6.53 Total: -6.81 kcal Atomic # 8 Polarization: -13.49 SS G_CDS: -2.31 Total: -15.80 kcal Atomic # 9 Polarization: 0.38 SS G_CDS: 0.71 Total: 1.09 kcal Atomic # 14 Polarization: -3.72 SS G_CDS: 2.10 Total: -1.63 kcal Total: -27.36 -1.93 -29.29 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_6580494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.233 kcal (2) G-P(sol) polarization free energy of solvation -27.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.595 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.931 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.293 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds