Wall clock time and date at job start Sun Mar 7 2021 08:27:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52997 * 109.47341 * 2 1 4 4 C 1.53003 * 109.46927 * 239.99556 * 2 1 3 5 5 O 1.45204 * 109.47230 * 119.99952 * 2 1 3 6 6 C 1.34645 * 116.99826 * 59.99637 * 5 2 1 7 7 O 1.21510 * 120.00032 * 0.02562 * 6 5 2 8 8 N 1.34769 * 119.99736 * 180.02562 * 6 5 2 9 9 C 1.46503 * 120.00125 * 180.02562 * 8 6 5 10 10 H 1.09010 * 112.84705 * 336.19857 * 9 8 6 11 11 C 1.53957 * 113.53951 * 107.50275 * 9 8 6 12 12 C 1.53781 * 87.01554 * 89.19303 * 11 9 8 13 13 F 1.39903 * 113.61302 * 270.76710 * 12 11 9 14 14 C 1.52997 * 113.61210 * 139.95654 * 12 11 9 15 15 N 1.46501 * 109.47402 * 85.85879 * 14 12 11 16 16 C 1.34781 * 120.00004 * 179.97438 * 15 14 12 17 17 O 1.21642 * 119.99677 * 0.02562 * 16 15 14 18 18 C 1.47183 * 119.99922 * 180.02562 * 16 15 14 19 19 C 1.36008 * 123.46283 * 359.97438 * 18 16 15 20 20 S 1.70446 * 110.81990 * 180.02562 * 19 18 16 21 21 C 1.75505 * 92.44378 * 0.02562 * 20 19 18 22 22 C 1.50698 * 124.71305 * 180.26535 * 21 20 19 23 23 O 1.42911 * 109.47235 * 244.69868 * 22 21 20 24 24 Si 1.86306 * 109.47151 * 4.69331 * 22 21 20 25 25 C 1.32774 * 110.57585 * 359.97438 * 21 20 19 26 26 C 1.53780 * 87.17717 * 25.36338 * 12 11 9 27 27 H 1.09000 * 109.46789 * 299.99895 * 1 2 3 28 28 H 1.09005 * 109.47127 * 60.00179 * 1 2 3 29 29 H 1.09003 * 109.47367 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47187 * 180.02562 * 3 2 1 31 31 H 1.09005 * 109.46864 * 299.99982 * 3 2 1 32 32 H 1.08991 * 109.47384 * 59.99724 * 3 2 1 33 33 H 1.08994 * 109.47486 * 299.99809 * 4 2 1 34 34 H 1.09000 * 109.46614 * 60.00430 * 4 2 1 35 35 H 1.08999 * 109.47181 * 180.02562 * 4 2 1 36 36 H 0.97002 * 120.00304 * 0.02562 * 8 6 5 37 37 H 1.08997 * 113.66245 * 334.66508 * 11 9 8 38 38 H 1.09003 * 113.61499 * 203.71349 * 11 9 8 39 39 H 1.08999 * 109.47081 * 325.85574 * 14 12 11 40 40 H 1.09001 * 109.47263 * 205.86062 * 14 12 11 41 41 H 0.96994 * 119.99717 * 0.02562 * 15 14 12 42 42 H 1.07996 * 124.58930 * 0.06056 * 19 18 16 43 43 H 1.08999 * 109.47725 * 124.69712 * 22 21 20 44 44 H 0.96698 * 113.99953 * 59.99443 * 23 22 21 45 45 H 1.48498 * 109.99918 * 180.02562 * 24 22 21 46 46 H 1.48496 * 109.99932 * 301.32246 * 24 22 21 47 47 H 1.08003 * 123.45502 * 180.02562 * 25 21 20 48 48 H 1.08994 * 113.61263 * 89.15735 * 26 12 11 49 49 H 1.08993 * 113.61114 * 219.97940 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 8 2.0141 -0.6845 1.1856 6 6 1.6522 -1.9724 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0672 -2.6654 2.4172 9 6 1.6740 -4.0669 2.5832 10 1 0.7599 -4.3167 2.0443 11 6 2.8253 -5.0609 2.3451 12 6 3.1492 -4.9202 3.8419 13 9 4.0425 -3.8819 4.1268 14 6 3.5389 -6.2397 4.5111 15 7 4.9736 -6.4742 4.3298 16 6 5.5449 -7.5834 4.8395 17 8 4.8691 -8.3900 5.4497 18 6 6.9864 -7.8187 4.6578 19 6 7.8071 -6.9653 3.9885 20 16 9.4074 -7.5515 3.9722 21 6 8.9717 -8.9841 4.8877 22 6 9.9370 -10.0651 5.3008 23 8 9.5898 -11.2884 4.6487 24 14 11.6667 -9.5718 4.8152 25 6 7.6746 -8.9801 5.1711 26 6 1.6740 -4.5375 4.0473 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1300 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6768 1.9563 0.8899 33 1 1.6767 -1.7490 -1.2492 34 1 1.6766 -0.2075 -2.1392 35 1 3.1300 -0.7218 -1.2490 36 1 2.6262 -2.2363 3.0837 37 1 3.6075 -4.6757 1.6910 38 1 2.4894 -6.0587 2.0629 39 1 2.9771 -7.0566 4.0583 40 1 3.3109 -6.1883 5.5758 41 1 5.5125 -5.8308 3.8436 42 1 7.4880 -6.0410 3.5299 43 1 9.8881 -10.2026 6.3810 44 1 9.6122 -11.2396 3.6832 45 1 12.6282 -10.6299 5.2166 46 1 11.7389 -9.3504 3.3486 47 1 7.1845 -9.7647 5.7284 48 1 1.0228 -5.3919 4.2313 49 1 1.5282 -3.7315 4.7663 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15774724_6894386.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:27:14 Heat of formation + Delta-G solvation = -134.323176 kcal Electronic energy + Delta-G solvation = -33376.345593 eV Core-core repulsion = 28540.397451 eV Total energy + Delta-G solvation = -4835.948142 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.139 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -48.94245 -41.90563 -41.06291 -39.91804 -38.89915 -37.89755 -37.22303 -36.00917 -35.27634 -33.90891 -31.98690 -29.21973 -28.38554 -28.32131 -27.10872 -26.97222 -25.70672 -24.34462 -23.00435 -22.10632 -21.22034 -20.92208 -20.36873 -19.43302 -19.07886 -18.21204 -17.92733 -17.67128 -17.26771 -17.21530 -16.93968 -16.54934 -16.50185 -16.36212 -16.00224 -15.92658 -15.53474 -15.49303 -15.38431 -14.91050 -14.61134 -14.48629 -14.43512 -14.08293 -13.87740 -13.77639 -13.65646 -13.45519 -13.36031 -13.17174 -13.11145 -12.93278 -12.89109 -12.81115 -12.67872 -12.46832 -12.44205 -12.33653 -11.90833 -11.66657 -11.42624 -11.39846 -11.16316 -11.07919 -10.75576 -10.36553 -10.27751 -10.01998 -9.48173 -5.03885 -0.36945 0.37219 0.68388 0.79397 1.07604 1.21671 1.54929 1.66874 1.89995 1.96612 2.21706 2.97103 3.02309 3.05502 3.18756 3.30529 3.54358 3.58059 3.62886 3.71981 3.77752 3.87574 3.92369 3.95725 4.25263 4.30640 4.35709 4.47050 4.49706 4.56997 4.59684 4.60299 4.60981 4.68851 4.74826 4.76952 4.80373 4.84294 4.85807 4.86048 4.89129 4.98406 5.11440 5.14021 5.21493 5.25260 5.28413 5.39134 5.55868 6.30169 6.32669 6.40292 7.04411 7.27032 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.686 5.686 9 C 0.130 3.870 10 H 0.112 0.888 11 C -0.161 4.161 12 C 0.084 3.916 13 F -0.192 7.192 14 C 0.112 3.888 15 N -0.713 5.713 16 C 0.578 3.422 17 O -0.579 6.579 18 C -0.182 4.182 19 C -0.192 4.192 20 S 0.249 5.751 21 C -0.245 4.245 22 C -0.046 4.046 23 O -0.544 6.544 24 Si 0.727 3.273 25 C -0.073 4.073 26 C -0.143 4.143 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.099 0.901 32 H 0.069 0.931 33 H 0.064 0.936 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.415 0.585 37 H 0.081 0.919 38 H 0.131 0.869 39 H 0.099 0.901 40 H 0.078 0.922 41 H 0.412 0.588 42 H 0.199 0.801 43 H 0.130 0.870 44 H 0.388 0.612 45 H -0.276 1.276 46 H -0.250 1.250 47 H 0.136 0.864 48 H 0.144 0.856 49 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.906 6.046 -1.519 6.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.402 3.598 7 O -0.480 6.480 8 N -0.346 5.346 9 C 0.026 3.974 10 H 0.130 0.870 11 C -0.200 4.200 12 C 0.066 3.934 13 F -0.172 7.172 14 C -0.011 4.011 15 N -0.365 5.365 16 C 0.365 3.635 17 O -0.460 6.460 18 C -0.200 4.200 19 C -0.331 4.331 20 S 0.516 5.484 21 C -0.362 4.362 22 C -0.157 4.157 23 O -0.353 6.353 24 Si 0.628 3.372 25 C -0.103 4.103 26 C -0.181 4.181 27 H 0.080 0.920 28 H 0.106 0.894 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.088 0.912 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.080 0.920 36 H 0.252 0.748 37 H 0.100 0.900 38 H 0.149 0.851 39 H 0.117 0.883 40 H 0.096 0.904 41 H 0.250 0.750 42 H 0.216 0.784 43 H 0.148 0.852 44 H 0.238 0.762 45 H -0.201 1.201 46 H -0.175 1.175 47 H 0.153 0.847 48 H 0.162 0.838 49 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 4.077 5.493 -2.024 7.134 hybrid contribution -1.640 -0.792 0.007 1.821 sum 2.437 4.701 -2.017 5.667 Atomic orbital electron populations 1.22478 0.93947 1.03771 1.03538 1.22375 0.94527 0.92564 0.81460 1.21895 1.02460 0.90911 1.04260 1.22470 1.01622 1.02281 0.97299 1.86323 1.71488 1.23262 1.47370 1.18273 0.78489 0.80745 0.82340 1.90909 1.42107 1.70996 1.44004 1.44446 1.54992 1.11868 1.23284 1.21920 0.99080 0.78246 0.98192 0.87038 1.24252 0.99212 1.02326 0.94168 1.22218 0.89597 0.84184 0.97440 1.92849 1.69882 1.59880 1.94580 1.21891 0.81321 0.95879 1.02055 1.45581 1.10258 1.23369 1.57268 1.17838 0.86820 0.80941 0.77915 1.90804 1.65102 1.46796 1.43266 1.20100 0.93852 0.98288 1.07786 1.26146 0.99695 1.04603 1.02609 1.83018 1.04903 1.11785 1.48701 1.24833 0.98712 1.03397 1.09232 1.24718 1.05935 0.82963 1.02045 1.86616 1.90669 1.32716 1.25269 0.94406 0.72904 0.87912 0.82027 1.20994 0.92930 0.97001 0.99333 1.24009 0.93738 1.04481 0.95911 0.91960 0.89446 0.91658 0.91195 0.88269 0.91216 0.91677 0.89450 0.91962 0.74820 0.90031 0.85133 0.88292 0.90391 0.75048 0.78427 0.85206 0.76224 1.20137 1.17515 0.84671 0.83787 0.88327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 2 C 0.13 0.27 1.13 -10.79 -0.01 0.26 16 3 C -0.14 0.37 8.85 71.98 0.64 1.01 16 4 C -0.18 -0.39 8.37 71.98 0.60 0.21 16 5 O -0.37 -1.78 9.94 -55.54 -0.55 -2.33 16 6 C 0.65 3.55 8.06 129.79 1.05 4.59 16 7 O -0.59 -6.00 11.48 19.81 0.23 -5.77 16 8 N -0.69 0.35 5.19 -567.31 -2.94 -2.60 16 9 C 0.13 -0.52 4.33 45.58 0.20 -0.32 16 10 H 0.11 -0.20 7.46 -2.38 -0.02 -0.22 16 11 C -0.16 0.99 7.33 31.18 0.23 1.22 16 12 C 0.08 -0.52 1.71 -10.27 -0.02 -0.54 16 13 F -0.19 0.60 15.57 44.97 0.70 1.30 16 14 C 0.11 -0.39 5.41 86.38 0.47 0.08 16 15 N -0.71 0.99 5.42 -466.59 -2.53 -1.54 16 16 C 0.58 3.26 7.79 86.59 0.67 3.93 16 17 O -0.58 -8.21 16.80 -4.16 -0.07 -8.28 16 18 C -0.18 -0.46 5.98 -19.87 -0.12 -0.58 16 19 C -0.19 0.78 10.38 67.30 0.70 1.48 16 20 S 0.25 -1.25 20.20 -56.49 -1.14 -2.39 16 21 C -0.25 0.07 5.66 24.51 0.14 0.21 16 22 C -0.05 0.04 2.94 71.24 0.21 0.25 16 23 O -0.54 -1.45 12.88 -148.98 -1.92 -3.37 16 24 Si 0.73 -2.59 30.92 68.60 2.12 -0.47 16 25 C -0.07 -0.31 9.95 22.67 0.23 -0.09 16 26 C -0.14 1.18 7.28 31.12 0.23 1.41 16 27 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 28 H 0.09 -0.09 8.14 -2.38 -0.02 -0.11 16 29 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 30 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.10 -0.59 8.14 -2.38 -0.02 -0.61 16 32 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.06 0.47 5.88 -2.39 -0.01 0.46 16 34 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 35 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 36 H 0.41 -1.11 7.89 -92.71 -0.73 -1.84 16 37 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 38 H 0.13 -1.15 7.92 -2.39 -0.02 -1.17 16 39 H 0.10 -0.42 7.87 -2.39 -0.02 -0.44 16 40 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 41 H 0.41 -2.39 6.57 -92.71 -0.61 -3.00 16 42 H 0.20 -2.06 7.01 -2.91 -0.02 -2.08 16 43 H 0.13 -0.25 7.96 -2.39 -0.02 -0.27 16 44 H 0.39 -1.38 8.70 -74.06 -0.64 -2.03 16 45 H -0.28 -0.95 7.11 99.48 0.71 -0.24 16 46 H -0.25 0.40 7.11 99.48 0.71 1.11 16 47 H 0.14 1.06 8.06 -2.91 -0.02 1.03 16 48 H 0.14 -1.75 8.10 -2.39 -0.02 -1.77 16 49 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 Total: 0.00 -23.33 416.87 -1.23 -24.56 By element: Atomic # 1 Polarization: -11.47 SS G_CDS: -0.93 Total: -12.40 kcal Atomic # 6 Polarization: 7.49 SS G_CDS: 5.81 Total: 13.30 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -5.47 Total: -4.14 kcal Atomic # 8 Polarization: -17.44 SS G_CDS: -2.31 Total: -19.76 kcal Atomic # 9 Polarization: 0.60 SS G_CDS: 0.70 Total: 1.30 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: 2.12 Total: -0.47 kcal Atomic # 16 Polarization: -1.25 SS G_CDS: -1.14 Total: -2.39 kcal Total: -23.33 -1.23 -24.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15774724_6894386.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.759 kcal (2) G-P(sol) polarization free energy of solvation -23.334 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.565 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds