Wall clock time and date at job start Sun Mar 7 2021 04:07:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.34815 * 125.90147 * 2 1 4 4 C 1.40988 * 107.48204 * 180.22336 * 3 2 1 5 5 C 1.50700 * 126.25329 * 179.79337 * 4 3 2 6 6 O 1.42906 * 109.46965 * 254.97270 * 5 4 3 7 7 Si 1.86303 * 109.47286 * 14.97047 * 5 4 3 8 8 C 1.34804 * 107.49062 * 359.77209 * 4 3 2 9 9 C 1.50702 * 125.90372 * 180.02562 * 8 4 3 10 10 N 1.36651 * 108.19248 * 359.97438 * 8 4 3 11 11 C 1.39671 * 125.68253 * 179.97438 * 10 8 4 12 12 C 1.40206 * 120.15506 * 269.98074 * 11 10 8 13 13 C 1.47574 * 120.18924 * 0.04553 * 12 11 10 14 14 O 1.21586 * 120.00777 * 359.97438 * 13 12 11 15 15 N 1.34784 * 119.99818 * 179.97438 * 13 12 11 16 16 C 1.46502 * 120.00094 * 179.97438 * 15 13 12 17 17 H 1.09001 * 112.84738 * 336.20138 * 16 15 13 18 18 C 1.53778 * 113.61081 * 107.50435 * 16 15 13 19 19 C 1.53780 * 87.08407 * 89.11814 * 18 16 15 20 20 H 1.09001 * 113.68615 * 270.87774 * 19 18 16 21 21 C 1.52992 * 113.61920 * 139.98052 * 19 18 16 22 22 F 1.39895 * 109.47294 * 87.50174 * 21 19 18 23 23 C 1.53778 * 113.61356 * 204.99853 * 16 15 13 24 24 C 1.39655 * 119.61551 * 180.02562 * 12 11 10 25 25 C 1.37830 * 119.91581 * 0.02562 * 24 12 11 26 26 C 1.38537 * 120.31279 * 359.71584 * 25 24 12 27 27 C 1.38068 * 120.38844 * 0.56282 * 26 25 24 28 28 H 1.08998 * 109.47091 * 270.16845 * 1 2 3 29 29 H 1.08999 * 109.47016 * 30.17421 * 1 2 3 30 30 H 1.09003 * 109.46990 * 150.16642 * 1 2 3 31 31 H 1.07999 * 126.25267 * 0.02562 * 3 2 1 32 32 H 1.08992 * 109.47417 * 134.97601 * 5 4 3 33 33 H 0.96705 * 113.99874 * 179.97438 * 6 5 4 34 34 H 1.48497 * 110.00063 * 178.67886 * 7 5 4 35 35 H 1.48492 * 110.00202 * 300.00297 * 7 5 4 36 36 H 1.08991 * 109.47368 * 269.99650 * 9 8 4 37 37 H 1.08997 * 109.47041 * 30.00422 * 9 8 4 38 38 H 1.09003 * 109.47034 * 149.99855 * 9 8 4 39 39 H 0.96997 * 119.99860 * 0.02562 * 15 13 12 40 40 H 1.09000 * 113.61656 * 203.66561 * 18 16 15 41 41 H 1.09001 * 113.61578 * 334.56769 * 18 16 15 42 42 H 1.09001 * 109.47389 * 207.50401 * 21 19 18 43 43 H 1.09001 * 109.47153 * 327.50311 * 21 19 18 44 44 H 1.09005 * 113.61459 * 25.44194 * 23 16 15 45 45 H 1.08999 * 113.60900 * 156.33516 * 23 16 15 46 46 H 1.07997 * 120.04012 * 180.02562 * 24 12 11 47 47 H 1.07998 * 119.84020 * 180.02562 * 25 24 12 48 48 H 1.07996 * 119.80499 * 180.27737 * 26 25 24 49 49 H 1.08002 * 119.96388 * 179.72398 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2976 1.0920 0.0000 4 6 3.6352 0.6466 -0.0052 5 6 4.8647 1.5180 -0.0115 6 8 5.4497 1.5069 -1.3153 7 14 4.3921 3.2620 0.4423 8 6 3.6134 -0.7013 -0.0031 9 6 4.8196 -1.6047 -0.0066 10 7 2.3084 -1.1068 0.0038 11 6 1.8672 -2.4320 0.0074 12 6 1.6382 -3.1014 -1.2031 13 6 1.8630 -2.4101 -2.4874 14 8 2.2475 -1.2567 -2.4980 15 7 1.6422 -3.0575 -3.6488 16 6 1.8649 -2.3711 -4.9238 17 1 1.7991 -1.2865 -4.8377 18 6 3.1161 -2.8568 -5.6744 19 6 2.2131 -3.9098 -6.3381 20 1 2.1418 -4.8417 -5.7771 21 6 2.5170 -4.1308 -7.8211 22 9 3.5164 -5.1008 -7.9529 23 6 1.0399 -2.9481 -6.0862 24 6 1.1965 -4.4261 -1.1863 25 6 0.9883 -5.0661 0.0165 26 6 1.2207 -4.4034 1.2106 27 6 1.6519 -3.0918 1.2090 28 1 -0.3633 0.0030 1.0276 29 1 -0.3633 0.8884 -0.5165 30 1 -0.3633 -0.8915 -0.5113 31 1 1.9666 2.1201 0.0004 32 1 5.5842 1.1364 0.7127 33 1 6.2471 2.0485 -1.3932 34 1 5.6006 4.1246 0.4707 35 1 3.4114 3.7939 -0.5377 36 1 5.1063 -1.8241 -1.0350 37 1 5.6459 -1.1094 0.5033 38 1 4.5789 -2.5341 0.5096 39 1 1.3351 -3.9775 -3.6404 40 1 3.5180 -2.1233 -6.3734 41 1 3.8782 -3.2835 -5.0224 42 1 1.6143 -4.4678 -8.3307 43 1 2.8574 -3.1956 -8.2656 44 1 0.1257 -3.4486 -5.7667 45 1 0.8741 -2.2396 -6.8978 46 1 1.0184 -4.9484 -2.1147 47 1 0.6471 -6.0908 0.0280 48 1 1.0591 -4.9142 2.1483 49 1 1.8267 -2.5803 2.1440 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15781660_12335856.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:13 Heat of formation + Delta-G solvation = -2.062388 kcal Electronic energy + Delta-G solvation = -33292.184443 eV Core-core repulsion = 28909.269035 eV Total energy + Delta-G solvation = -4382.915408 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -48.52910 -42.70693 -41.30313 -40.08398 -38.84346 -37.50897 -34.82042 -34.07091 -33.38907 -32.40132 -30.44032 -29.93595 -29.42036 -27.05182 -26.88689 -25.38247 -24.44260 -23.89631 -23.25912 -22.02146 -20.84798 -20.42335 -19.81279 -18.91887 -18.15932 -17.70829 -17.36625 -17.12460 -16.84254 -16.72843 -16.41655 -16.16237 -15.88657 -15.85237 -15.50755 -15.19798 -15.06361 -14.80869 -14.61667 -14.40102 -13.97455 -13.94965 -13.91088 -13.76440 -13.57461 -13.49131 -13.40170 -13.29208 -13.16555 -12.99927 -12.88392 -12.48935 -12.22796 -12.21629 -12.07189 -11.96015 -11.61259 -11.56463 -11.23866 -10.86702 -10.33195 -10.21871 -10.06822 -10.01917 -9.28352 -8.39355 -4.67182 -0.47123 -0.07577 1.44224 1.65246 1.76429 1.84046 1.94092 2.08752 2.15677 2.31721 2.54783 3.21030 3.27563 3.43238 3.46985 3.50475 3.68698 3.73558 3.85301 3.90265 3.96419 4.02899 4.06662 4.08491 4.21518 4.26630 4.35837 4.45913 4.50024 4.51497 4.53444 4.55262 4.56053 4.57298 4.73930 4.75975 4.78991 4.85763 4.89717 4.90588 4.94370 5.00135 5.05074 5.06611 5.11527 5.12787 5.18869 5.45295 5.50898 5.52605 5.71656 6.37504 6.38633 6.51700 6.80875 6.82971 7.18833 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 C 0.042 3.958 3 C -0.181 4.181 4 C -0.148 4.148 5 C -0.036 4.036 6 O -0.535 6.535 7 Si 0.691 3.309 8 C 0.071 3.929 9 C -0.080 4.080 10 N -0.396 5.396 11 C 0.173 3.827 12 C -0.126 4.126 13 C 0.549 3.451 14 O -0.493 6.493 15 N -0.712 5.712 16 C 0.124 3.876 17 H 0.107 0.893 18 C -0.145 4.145 19 C -0.147 4.147 20 H 0.100 0.900 21 C 0.070 3.930 22 F -0.218 7.218 23 C -0.137 4.137 24 C -0.082 4.082 25 C -0.113 4.113 26 C -0.083 4.083 27 C -0.112 4.112 28 H 0.070 0.930 29 H 0.079 0.921 30 H 0.056 0.944 31 H 0.137 0.863 32 H 0.061 0.939 33 H 0.370 0.630 34 H -0.269 1.269 35 H -0.258 1.258 36 H 0.069 0.931 37 H 0.078 0.922 38 H 0.056 0.944 39 H 0.398 0.602 40 H 0.095 0.905 41 H 0.074 0.926 42 H 0.076 0.924 43 H 0.077 0.923 44 H 0.079 0.921 45 H 0.101 0.899 46 H 0.133 0.867 47 H 0.138 0.862 48 H 0.139 0.861 49 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.658 -4.567 2.661 6.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.066 4.066 3 C -0.205 4.205 4 C -0.155 4.155 5 C -0.147 4.147 6 O -0.341 6.341 7 Si 0.593 3.407 8 C -0.038 4.038 9 C -0.138 4.138 10 N -0.071 5.071 11 C 0.082 3.918 12 C -0.130 4.130 13 C 0.335 3.665 14 O -0.366 6.366 15 N -0.365 5.365 16 C 0.019 3.981 17 H 0.125 0.875 18 C -0.183 4.183 19 C -0.166 4.166 20 H 0.118 0.882 21 C 0.015 3.985 22 F -0.199 7.199 23 C -0.175 4.175 24 C -0.101 4.101 25 C -0.131 4.131 26 C -0.102 4.102 27 C -0.131 4.131 28 H 0.089 0.911 29 H 0.098 0.902 30 H 0.075 0.925 31 H 0.155 0.845 32 H 0.079 0.921 33 H 0.216 0.784 34 H -0.195 1.195 35 H -0.182 1.182 36 H 0.088 0.912 37 H 0.097 0.903 38 H 0.075 0.925 39 H 0.233 0.767 40 H 0.113 0.887 41 H 0.093 0.907 42 H 0.094 0.906 43 H 0.095 0.905 44 H 0.097 0.903 45 H 0.119 0.881 46 H 0.150 0.850 47 H 0.156 0.844 48 H 0.157 0.843 49 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -3.990 -3.574 2.282 5.822 hybrid contribution 0.791 -0.811 -0.989 1.504 sum -3.199 -4.385 1.292 5.580 Atomic orbital electron populations 1.20258 0.88484 1.02873 1.02219 1.20069 0.92848 0.84625 1.09008 1.20401 0.91875 0.97282 1.10955 1.18270 0.92918 0.91542 1.12731 1.24009 0.94616 1.09239 0.86795 1.86708 1.45339 1.71392 1.30615 0.95013 0.81447 0.74401 0.89876 1.19912 0.83391 0.93633 1.06859 1.20249 0.93754 0.97260 1.02512 1.40894 1.05591 1.02108 1.58523 1.17505 0.98068 0.83999 0.92190 1.20215 1.04619 0.95116 0.93082 1.18120 0.78395 0.86569 0.83391 1.90976 1.42852 1.15822 1.86949 1.45548 1.69540 1.16483 1.04908 1.21767 0.95910 0.98431 0.82015 0.87450 1.23503 0.97135 0.98127 0.99562 1.23274 0.97986 0.99182 0.96128 0.88192 1.22022 0.89417 0.90534 0.96477 1.92782 1.64106 1.65965 1.97024 1.23307 0.97131 0.98740 0.98325 1.21276 0.97072 0.92649 0.99121 1.21284 0.99227 1.00761 0.91870 1.21348 0.96124 0.93638 0.99091 1.21395 0.99309 0.95177 0.97255 0.91137 0.90237 0.92528 0.84519 0.92054 0.78395 1.19522 1.18235 0.91229 0.90295 0.92462 0.76685 0.88656 0.90673 0.90578 0.90465 0.90278 0.88082 0.84959 0.84444 0.84312 0.84328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.15 10.09 36.01 0.36 0.22 16 2 C 0.04 0.18 5.98 -81.66 -0.49 -0.30 16 3 C -0.18 -0.92 9.27 -39.75 -0.37 -1.29 16 4 C -0.15 -0.79 5.39 -104.80 -0.56 -1.35 16 5 C -0.04 -0.13 2.59 36.01 0.09 -0.03 16 6 O -0.53 -2.61 12.86 -35.23 -0.45 -3.06 16 7 Si 0.69 1.50 30.84 -169.99 -5.24 -3.74 16 8 C 0.07 0.35 6.00 -81.66 -0.49 -0.14 16 9 C -0.08 -0.24 9.88 36.01 0.36 0.11 16 10 N -0.40 -1.61 1.45 -52.35 -0.08 -1.69 16 11 C 0.17 0.36 4.52 -83.35 -0.38 -0.02 16 12 C -0.13 -0.16 5.89 -104.82 -0.62 -0.78 16 13 C 0.55 1.64 7.77 -12.45 -0.10 1.55 16 14 O -0.49 -3.47 13.27 5.29 0.07 -3.40 16 15 N -0.71 0.07 5.21 -54.04 -0.28 -0.21 16 16 C 0.12 0.00 4.32 -67.12 -0.29 -0.30 16 17 H 0.11 0.24 7.46 -51.93 -0.39 -0.15 16 18 C -0.14 0.03 7.43 -25.92 -0.19 -0.16 16 19 C -0.15 0.26 3.97 -89.81 -0.36 -0.09 16 20 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 21 C 0.07 -0.09 7.39 37.15 0.27 0.19 16 22 F -0.22 -0.53 17.36 2.25 0.04 -0.49 16 23 C -0.14 0.35 7.39 -25.92 -0.19 0.16 16 24 C -0.08 0.15 9.54 -39.20 -0.37 -0.23 16 25 C -0.11 0.31 10.02 -39.62 -0.40 -0.08 16 26 C -0.08 0.19 10.03 -39.53 -0.40 -0.20 16 27 C -0.11 0.03 9.96 -39.45 -0.39 -0.36 16 28 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 29 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 30 H 0.06 0.12 7.83 -51.93 -0.41 -0.29 16 31 H 0.14 0.54 6.55 -52.49 -0.34 0.19 16 32 H 0.06 0.10 7.50 -51.93 -0.39 -0.29 16 33 H 0.37 0.19 8.74 45.56 0.40 0.59 16 34 H -0.27 -0.99 7.11 56.52 0.40 -0.59 16 35 H -0.26 -1.43 7.06 56.52 0.40 -1.03 16 36 H 0.07 0.30 8.14 -51.93 -0.42 -0.12 16 37 H 0.08 0.14 7.50 -51.93 -0.39 -0.25 16 38 H 0.06 0.11 7.83 -51.93 -0.41 -0.30 16 39 H 0.40 -1.09 6.73 -40.82 -0.27 -1.37 16 40 H 0.10 -0.05 7.90 -51.93 -0.41 -0.46 16 41 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 42 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 43 H 0.08 -0.17 7.84 -51.93 -0.41 -0.58 16 44 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 45 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 46 H 0.13 -0.58 6.40 -52.49 -0.34 -0.92 16 47 H 0.14 -0.69 8.06 -52.49 -0.42 -1.12 16 48 H 0.14 -0.63 8.06 -52.49 -0.42 -1.05 16 49 H 0.14 -0.14 8.06 -52.49 -0.42 -0.57 16 LS Contribution 404.13 15.07 6.09 6.09 Total: 0.00 -10.08 404.13 -11.56 -21.65 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -7.20 Total: -12.03 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -4.51 Total: -3.12 kcal Atomic # 7 Polarization: -1.54 SS G_CDS: -0.36 Total: -1.90 kcal Atomic # 8 Polarization: -6.07 SS G_CDS: -0.38 Total: -6.45 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: 1.50 SS G_CDS: -5.24 Total: -3.74 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.08 -11.56 -21.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_12335856.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.585 kcal (2) G-P(sol) polarization free energy of solvation -10.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.647 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds