Wall clock time and date at job start Sun Mar 7 2021 04:07:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.46997 * 2 1 4 4 C 1.50706 * 109.47202 * 119.99898 * 2 1 3 5 5 C 1.37817 * 119.93681 * 15.32752 * 4 2 1 6 6 C 1.39670 * 119.87384 * 180.30110 * 5 4 2 7 7 C 1.47732 * 120.11651 * 179.67176 * 6 5 4 8 8 O 1.21564 * 119.99788 * 359.72886 * 7 6 5 9 9 N 1.34773 * 119.99976 * 179.72308 * 7 6 5 10 10 C 1.46500 * 120.00071 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.84640 * 336.19080 * 10 9 7 12 12 C 1.53778 * 113.69512 * 107.46146 * 10 9 7 13 13 C 1.53784 * 87.08081 * 89.12825 * 12 10 9 14 14 H 1.09004 * 113.61451 * 270.88641 * 13 12 10 15 15 C 1.52992 * 113.61673 * 139.98135 * 13 12 10 16 16 F 1.39902 * 109.47024 * 87.49883 * 15 13 12 17 17 C 1.53778 * 113.61391 * 205.00280 * 10 9 7 18 18 C 1.39632 * 119.76787 * 359.39629 * 6 5 4 19 19 C 1.37856 * 119.87638 * 0.28062 * 18 6 5 20 20 C 1.38634 * 120.12069 * 0.02562 * 19 18 6 21 21 F 1.35101 * 119.88205 * 179.97438 * 20 19 18 22 22 H 0.96694 * 114.00346 * 299.99847 * 1 2 3 23 23 H 1.08996 * 109.47442 * 239.99900 * 2 1 3 24 24 H 1.48500 * 110.00027 * 178.67921 * 3 2 1 25 25 H 1.48498 * 109.99612 * 299.99948 * 3 2 1 26 26 H 1.08000 * 120.06658 * 359.97438 * 5 4 2 27 27 H 0.97005 * 119.99999 * 359.97438 * 9 7 6 28 28 H 1.08993 * 113.61229 * 334.58149 * 12 10 9 29 29 H 1.09000 * 113.61263 * 203.67798 * 12 10 9 30 30 H 1.08996 * 109.47544 * 207.50317 * 15 13 12 31 31 H 1.09007 * 109.47088 * 327.50753 * 15 13 12 32 32 H 1.08998 * 113.61879 * 156.24852 * 17 10 9 33 33 H 1.08997 * 113.69304 * 25.34938 * 17 10 9 34 34 H 1.08001 * 120.06145 * 180.29703 * 18 6 5 35 35 H 1.07998 * 119.94324 * 180.02562 * 19 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0747 -1.5000 1.9668 6 6 1.5401 -2.1527 3.1105 7 6 0.6246 -2.9946 3.9077 8 8 -0.5373 -3.1162 3.5714 9 7 1.0775 -3.6279 5.0078 10 6 0.1698 -4.4632 5.7981 11 1 -0.8770 -4.1867 5.6725 12 6 0.4308 -5.9714 5.6493 13 6 1.4148 -5.8371 6.8235 14 1 2.4314 -5.5924 6.5154 15 6 1.3562 -7.0058 7.8090 16 9 2.2169 -8.0216 7.3794 17 6 0.5948 -4.6144 7.2682 18 6 2.8751 -2.0114 3.4945 19 6 3.7250 -1.2245 2.7470 20 6 3.2564 -0.5737 1.6162 21 9 4.0934 0.1967 0.8874 22 1 -0.3933 0.4416 0.7650 23 1 1.7923 -0.5138 -0.8899 24 1 3.5345 1.7704 0.0322 25 1 1.5614 2.4678 -1.2085 26 1 0.0441 -1.6096 1.6629 27 1 2.0048 -3.5312 5.2759 28 1 0.9089 -6.2409 4.7077 29 1 -0.4380 -6.5893 5.8762 30 1 1.6629 -6.6635 8.7973 31 1 0.3371 -7.3895 7.8574 32 1 -0.2291 -4.8614 7.9378 33 1 1.2053 -3.7892 7.6348 34 1 3.2412 -2.5179 4.3753 35 1 4.7579 -1.1148 3.0428 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15781660_12496548.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:32 Heat of formation + Delta-G solvation = -98.128965 kcal Electronic energy + Delta-G solvation = -21883.351936 eV Core-core repulsion = 18099.071601 eV Total energy + Delta-G solvation = -3784.280335 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.101 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -50.43283 -48.51868 -41.64568 -40.31810 -39.09963 -37.70759 -34.77621 -32.69244 -31.95321 -29.36833 -27.14908 -26.71635 -25.30285 -23.50614 -23.26942 -21.74756 -20.42256 -19.33437 -18.84835 -17.96459 -17.77139 -17.21827 -17.13583 -16.83991 -16.73923 -16.37015 -16.06778 -15.92991 -15.80485 -15.41656 -15.14468 -14.77575 -14.56630 -14.08350 -13.88817 -13.73536 -13.53243 -13.38470 -13.29155 -12.79682 -12.36565 -12.10520 -11.83200 -11.47842 -11.44625 -11.20580 -11.09726 -10.92253 -10.23903 -10.04255 -9.72368 -5.04854 -0.52742 0.01441 1.20027 1.57084 1.61181 1.92638 1.97938 2.56631 2.98214 3.24068 3.32634 3.38505 3.44788 3.56363 3.65503 3.68018 3.81339 3.97632 4.08100 4.18914 4.25997 4.33774 4.42304 4.54232 4.62735 4.72407 4.78577 4.79862 4.84027 4.88893 5.00962 5.02979 5.05790 5.11174 5.20496 5.53869 5.60602 6.40696 6.60609 7.08441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.072 4.072 3 Si 0.764 3.236 4 C -0.157 4.157 5 C -0.028 4.028 6 C -0.151 4.151 7 C 0.562 3.438 8 O -0.574 6.574 9 N -0.694 5.694 10 C 0.112 3.888 11 H 0.090 0.910 12 C -0.151 4.151 13 C -0.140 4.140 14 H 0.105 0.895 15 C 0.061 3.939 16 F -0.242 7.242 17 C -0.119 4.119 18 C -0.044 4.044 19 C -0.145 4.145 20 C 0.105 3.895 21 F -0.131 7.131 22 H 0.397 0.603 23 H 0.114 0.886 24 H -0.255 1.255 25 H -0.304 1.304 26 H 0.143 0.857 27 H 0.415 0.585 28 H 0.059 0.941 29 H 0.098 0.902 30 H 0.094 0.906 31 H 0.087 0.913 32 H 0.114 0.886 33 H 0.095 0.905 34 H 0.173 0.827 35 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.515 1.619 7.558 8.129 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.181 4.181 3 Si 0.668 3.332 4 C -0.158 4.158 5 C -0.047 4.047 6 C -0.154 4.154 7 C 0.351 3.649 8 O -0.454 6.454 9 N -0.346 5.346 10 C 0.006 3.994 11 H 0.108 0.892 12 C -0.190 4.190 13 C -0.159 4.159 14 H 0.123 0.877 15 C 0.006 3.994 16 F -0.223 7.223 17 C -0.157 4.157 18 C -0.063 4.063 19 C -0.164 4.164 20 C 0.086 3.914 21 F -0.109 7.109 22 H 0.247 0.753 23 H 0.131 0.869 24 H -0.181 1.181 25 H -0.233 1.233 26 H 0.161 0.839 27 H 0.254 0.746 28 H 0.078 0.922 29 H 0.117 0.883 30 H 0.113 0.887 31 H 0.105 0.895 32 H 0.132 0.868 33 H 0.114 0.886 34 H 0.190 0.810 35 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 2.310 1.800 6.354 6.997 hybrid contribution 0.524 -0.655 -0.740 1.119 sum 2.834 1.144 5.615 6.393 Atomic orbital electron populations 1.86476 1.16769 1.81933 1.50725 1.25090 0.85667 1.10828 0.96530 0.94340 0.78733 0.74306 0.85833 1.20274 0.92975 1.02448 1.00130 1.20897 1.00602 0.91538 0.91665 1.19951 0.95078 1.02362 0.98018 1.18365 0.86885 0.79033 0.80656 1.90802 1.19669 1.64534 1.70398 1.45457 1.14731 1.48193 1.26227 1.21890 0.94731 0.90293 0.92478 0.89185 1.23562 1.00118 0.96522 0.98797 1.23233 1.00325 0.95966 0.96368 0.87673 1.22293 0.93510 0.84763 0.98787 1.92737 1.73751 1.63677 1.92132 1.23256 1.00770 0.97320 0.94369 1.21482 0.90484 0.95112 0.99201 1.21394 1.02937 0.98157 0.93900 1.18016 0.87416 0.93617 0.92356 1.91559 1.71232 1.71906 1.76216 0.75258 0.86904 1.18094 1.23257 0.83901 0.74592 0.92236 0.88312 0.88742 0.89481 0.86803 0.88635 0.81021 0.81153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.97 11.64 -148.98 -1.73 -2.71 16 2 C -0.07 -0.08 2.96 71.24 0.21 0.13 16 3 Si 0.76 -0.05 30.81 68.60 2.11 2.06 16 4 C -0.16 -0.08 5.13 -19.86 -0.10 -0.18 16 5 C -0.03 -0.04 8.78 22.52 0.20 0.15 16 6 C -0.15 0.11 5.87 -20.09 -0.12 0.00 16 7 C 0.56 1.43 7.77 86.75 0.67 2.10 16 8 O -0.57 -6.63 15.94 -3.92 -0.06 -6.69 16 9 N -0.69 2.95 5.22 -443.03 -2.31 0.64 16 10 C 0.11 -0.42 4.32 45.52 0.20 -0.22 16 11 H 0.09 0.06 7.46 -2.39 -0.02 0.04 16 12 C -0.15 0.52 7.43 31.12 0.23 0.75 16 13 C -0.14 1.01 3.98 -10.27 -0.04 0.97 16 14 H 0.11 -0.83 8.14 -2.39 -0.02 -0.85 16 15 C 0.06 -0.34 7.39 71.98 0.53 0.19 16 16 F -0.24 -0.74 17.36 44.97 0.78 0.04 16 17 C -0.12 1.15 7.39 31.12 0.23 1.38 16 18 C -0.04 0.31 9.54 22.52 0.21 0.52 16 19 C -0.15 0.80 10.01 22.27 0.22 1.02 16 20 C 0.11 -0.05 6.67 22.47 0.15 0.10 16 21 F -0.13 -0.35 12.81 44.97 0.58 0.22 16 22 H 0.40 -2.46 8.44 -74.06 -0.63 -3.09 16 23 H 0.11 0.29 7.96 -2.39 -0.02 0.27 16 24 H -0.26 -1.07 5.27 99.48 0.52 -0.54 16 25 H -0.30 -2.27 7.11 99.48 0.71 -1.57 16 26 H 0.14 0.55 6.67 -2.91 -0.02 0.54 16 27 H 0.42 -4.50 6.73 -92.70 -0.62 -5.12 16 28 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 29 H 0.10 -0.41 7.90 -2.39 -0.02 -0.43 16 30 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 31 H 0.09 -0.67 7.84 -2.38 -0.02 -0.69 16 32 H 0.11 -1.32 8.10 -2.39 -0.02 -1.33 16 33 H 0.10 -1.15 8.14 -2.39 -0.02 -1.17 16 34 H 0.17 -2.50 6.40 -2.91 -0.02 -2.52 16 35 H 0.17 -1.75 8.06 -2.91 -0.02 -1.77 16 Total: 0.00 -20.36 301.53 1.71 -18.64 By element: Atomic # 1 Polarization: -18.88 SS G_CDS: -0.25 Total: -19.13 kcal Atomic # 6 Polarization: 4.32 SS G_CDS: 2.60 Total: 6.92 kcal Atomic # 7 Polarization: 2.95 SS G_CDS: -2.31 Total: 0.64 kcal Atomic # 8 Polarization: -7.60 SS G_CDS: -1.80 Total: -9.40 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 1.36 Total: 0.26 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: 2.11 Total: 2.06 kcal Total: -20.36 1.71 -18.64 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_12496548.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.485 kcal (2) G-P(sol) polarization free energy of solvation -20.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.712 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds