Wall clock time and date at job start Sun Mar 7 2021 04:07:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86295 * 109.46872 * 2 1 4 4 C 1.50701 * 109.46802 * 120.00224 * 2 1 3 5 5 C 1.38327 * 119.87570 * 65.00313 * 4 2 1 6 6 C 1.38002 * 120.13077 * 180.02562 * 5 4 2 7 7 C 1.39401 * 119.86944 * 359.97055 * 6 5 4 8 8 C 1.48274 * 120.12978 * 179.97438 * 7 6 5 9 9 C 1.39499 * 119.97798 * 179.97438 * 8 7 6 10 10 C 1.37668 * 120.02326 * 179.97438 * 9 8 7 11 11 C 1.39706 * 119.97891 * 0.02735 * 10 9 8 12 12 C 1.47719 * 120.03056 * 180.02562 * 11 10 9 13 13 O 1.21570 * 119.99377 * 359.97438 * 12 11 10 14 14 N 1.34769 * 120.00328 * 179.97438 * 12 11 10 15 15 C 1.46501 * 120.00014 * 179.97438 * 14 12 11 16 16 H 1.09004 * 112.85074 * 336.20143 * 15 14 12 17 17 C 1.53782 * 113.61142 * 107.50467 * 15 14 12 18 18 C 1.53962 * 87.11063 * 89.18830 * 17 15 14 19 19 H 1.08993 * 113.61598 * 270.84305 * 18 17 15 20 20 C 1.52999 * 113.66529 * 139.88900 * 18 17 15 21 21 F 1.39897 * 109.47277 * 87.55323 * 20 18 17 22 22 C 1.53781 * 113.61619 * 205.00312 * 15 14 12 23 23 C 1.39709 * 119.94864 * 0.27322 * 11 10 9 24 24 C 1.37670 * 119.97526 * 359.44731 * 23 11 10 25 25 C 1.39407 * 119.74361 * 0.25705 * 7 6 5 26 26 C 1.37992 * 119.87244 * 359.51651 * 25 7 6 27 27 H 0.96699 * 113.99970 * 299.99920 * 1 2 3 28 28 H 1.08998 * 109.46505 * 240.00044 * 2 1 3 29 29 H 1.48491 * 110.00248 * 299.99998 * 3 2 1 30 30 H 1.48508 * 110.00081 * 61.32262 * 3 2 1 31 31 H 1.08001 * 119.93301 * 0.02562 * 5 4 2 32 32 H 1.07996 * 120.06411 * 179.97438 * 6 5 4 33 33 H 1.07994 * 119.99031 * 0.02562 * 9 8 7 34 34 H 1.08004 * 120.01152 * 180.02562 * 10 9 8 35 35 H 0.97001 * 120.00013 * 0.02562 * 14 12 11 36 36 H 1.08997 * 113.61668 * 203.66381 * 17 15 14 37 37 H 1.08998 * 113.61674 * 334.48890 * 17 15 14 38 38 H 1.09002 * 109.47053 * 207.55709 * 20 18 17 39 39 H 1.09004 * 109.47121 * 327.55345 * 20 18 17 40 40 H 1.09002 * 113.61445 * 25.43587 * 22 15 14 41 41 H 1.09002 * 113.61408 * 156.25317 * 22 15 14 42 42 H 1.07996 * 120.01457 * 179.70892 * 23 11 10 43 43 H 1.08000 * 119.98906 * 180.30475 * 24 23 11 44 44 H 1.07999 * 120.05854 * 179.74642 * 25 7 6 45 45 H 1.08005 * 119.93536 * 180.23316 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6830 -2.0612 1.3958 6 6 2.1401 -2.7170 2.5207 7 6 2.8537 -2.0155 3.4913 8 6 3.3469 -2.7142 4.7026 9 6 4.0612 -2.0093 5.6716 10 6 4.5191 -2.6570 6.7968 11 6 4.2688 -4.0207 6.9678 12 6 4.7592 -4.7167 8.1750 13 8 5.3812 -4.1027 9.0199 14 7 4.5170 -6.0322 8.3396 15 6 5.0038 -6.7224 9.5366 16 1 5.8579 -6.2237 9.9949 17 6 3.8910 -7.0842 10.5344 18 6 3.7419 -8.4109 9.7676 19 1 3.0341 -8.3598 8.9403 20 6 3.5120 -9.6217 10.6741 21 9 2.1424 -9.7672 10.9197 22 6 5.2074 -8.2335 9.3364 23 6 3.5588 -4.7271 5.9937 24 6 3.0968 -4.0762 4.8720 25 6 3.0967 -0.6533 3.3216 26 6 2.6388 -0.0092 2.1903 27 1 -0.3933 0.4417 0.7650 28 1 1.7922 -0.5138 -0.8900 29 1 1.5614 2.4678 -1.2084 30 1 1.5878 2.4585 1.2243 31 1 1.1305 -2.6037 0.6429 32 1 1.9453 -3.7714 2.6489 33 1 4.2543 -0.9550 5.5394 34 1 5.0717 -2.1109 7.5471 35 1 4.0209 -6.5221 7.6652 36 1 4.2457 -7.2102 11.5573 37 1 3.0163 -6.4374 10.4665 38 1 3.8907 -10.5191 10.1847 39 1 4.0367 -9.4738 11.6180 40 1 5.3948 -8.5153 8.3003 41 1 5.9231 -8.6734 10.0309 42 1 3.3688 -5.7823 6.1225 43 1 2.5437 -4.6209 4.1212 44 1 3.6455 -0.1041 4.0723 45 1 2.8298 1.0453 2.0560 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15781660_13158362.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:07:49 Heat of formation + Delta-G solvation = -39.564024 kcal Electronic energy + Delta-G solvation = -27632.568193 eV Core-core repulsion = 23496.301600 eV Total energy + Delta-G solvation = -4136.266593 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -48.53344 -41.64613 -40.97347 -39.95186 -38.89029 -37.65476 -34.81207 -33.93322 -32.66089 -31.67512 -30.99185 -29.42494 -27.06882 -26.89776 -24.82388 -24.75291 -23.68591 -22.67645 -22.48313 -21.43710 -20.48387 -19.34347 -18.56476 -17.89270 -17.38941 -17.10683 -16.87344 -16.83877 -16.58867 -16.35340 -16.10216 -16.03140 -15.88996 -15.54811 -15.17339 -15.11470 -15.00717 -14.70595 -14.38149 -14.24615 -14.11566 -13.86325 -13.71370 -13.56290 -13.46171 -13.20464 -12.83406 -12.66114 -12.24777 -12.09041 -12.00787 -11.97716 -11.63087 -11.59093 -11.25764 -10.99713 -10.80821 -10.63231 -10.15939 -10.14508 -10.05202 -9.14963 -5.01141 -0.74240 0.25814 0.30794 0.45628 1.22417 1.53923 1.80056 1.91614 1.97020 2.54772 2.93651 3.19513 3.25851 3.28767 3.37078 3.44641 3.49910 3.57380 3.65027 3.72369 3.75287 3.87778 3.92461 3.96141 4.05623 4.14464 4.18304 4.20683 4.25879 4.45807 4.47523 4.52512 4.53787 4.54381 4.60272 4.70646 4.77852 4.82294 4.87855 4.91994 4.95834 5.04020 5.06074 5.11481 5.20150 5.33076 5.40326 5.46460 5.56504 5.71692 5.82730 6.33576 6.37676 7.13339 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.686 3.314 4 C -0.111 4.111 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.016 4.016 9 C -0.118 4.118 10 C -0.053 4.053 11 C -0.137 4.137 12 C 0.563 3.437 13 O -0.531 6.531 14 N -0.710 5.710 15 C 0.120 3.880 16 H 0.109 0.891 17 C -0.146 4.146 18 C -0.148 4.148 19 H 0.101 0.899 20 C 0.070 3.930 21 F -0.218 7.218 22 C -0.137 4.137 23 C -0.082 4.082 24 C -0.118 4.118 25 C -0.100 4.100 26 C -0.116 4.116 27 H 0.376 0.624 28 H 0.119 0.881 29 H -0.257 1.257 30 H -0.260 1.260 31 H 0.129 0.871 32 H 0.129 0.871 33 H 0.135 0.865 34 H 0.140 0.860 35 H 0.401 0.599 36 H 0.096 0.904 37 H 0.076 0.924 38 H 0.076 0.924 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.101 0.899 42 H 0.127 0.873 43 H 0.133 0.867 44 H 0.132 0.868 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.274 -2.046 -2.014 3.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.587 3.413 4 C -0.112 4.112 5 C -0.108 4.108 6 C -0.123 4.123 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.136 4.136 10 C -0.072 4.072 11 C -0.140 4.140 12 C 0.351 3.649 13 O -0.408 6.408 14 N -0.362 5.362 15 C 0.015 3.985 16 H 0.127 0.873 17 C -0.185 4.185 18 C -0.167 4.167 19 H 0.119 0.881 20 C 0.016 3.984 21 F -0.199 7.199 22 C -0.175 4.175 23 C -0.100 4.100 24 C -0.136 4.136 25 C -0.118 4.118 26 C -0.133 4.133 27 H 0.224 0.776 28 H 0.137 0.863 29 H -0.182 1.182 30 H -0.185 1.185 31 H 0.147 0.853 32 H 0.147 0.853 33 H 0.153 0.847 34 H 0.158 0.842 35 H 0.236 0.764 36 H 0.114 0.886 37 H 0.095 0.905 38 H 0.094 0.906 39 H 0.096 0.904 40 H 0.098 0.902 41 H 0.120 0.880 42 H 0.145 0.855 43 H 0.151 0.849 44 H 0.150 0.850 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.577 -1.084 -1.942 3.404 hybrid contribution -1.462 -0.571 0.210 1.583 sum 1.116 -1.655 -1.732 2.642 Atomic orbital electron populations 1.86612 1.17602 1.79973 1.49336 1.25054 0.84041 1.11076 0.98456 0.94947 0.91653 0.74450 0.80233 1.20392 0.99164 0.94939 0.96679 1.20980 0.98572 0.93733 0.97534 1.21315 0.97319 1.00132 0.93488 1.18821 0.98791 0.93489 0.93801 1.18997 0.96125 0.93302 0.93239 1.21250 0.98331 1.00516 0.93469 1.21231 0.96143 0.92894 0.96908 1.19942 1.03309 0.95122 0.95638 1.18271 0.79108 0.81628 0.85928 1.90804 1.40172 1.65845 1.43975 1.45574 1.57933 1.09456 1.23247 1.21817 0.97933 0.92582 0.86177 0.87327 1.23552 0.99787 0.96146 0.98967 1.23315 0.98332 0.95389 0.99651 0.88121 1.22021 0.77451 0.98768 1.00205 1.92784 1.34150 1.97056 1.95891 1.23308 0.96010 0.95108 1.03106 1.21191 0.96077 0.99532 0.93223 1.21165 1.00618 0.93757 0.98058 1.21224 0.99411 0.93556 0.97605 1.21013 0.98504 0.99796 0.94025 0.77606 0.86295 1.18163 1.18492 0.85278 0.85293 0.84703 0.84184 0.76357 0.88588 0.90545 0.90555 0.90442 0.90204 0.88020 0.85478 0.84880 0.85050 0.85222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.44 12.83 -35.23 -0.45 -0.89 16 2 C -0.08 0.06 2.80 36.01 0.10 0.16 16 3 Si 0.69 -0.93 29.87 -169.99 -5.08 -6.01 16 4 C -0.11 0.05 5.36 -104.55 -0.56 -0.51 16 5 C -0.09 0.03 9.67 -39.64 -0.38 -0.35 16 6 C -0.10 0.06 9.43 -39.24 -0.37 -0.31 16 7 C -0.05 0.01 5.88 -104.90 -0.62 -0.61 16 8 C -0.02 0.00 5.88 -104.83 -0.62 -0.61 16 9 C -0.12 0.02 9.41 -39.32 -0.37 -0.35 16 10 C -0.05 -0.05 9.58 -39.24 -0.38 -0.43 16 11 C -0.14 -0.12 5.88 -104.93 -0.62 -0.73 16 12 C 0.56 1.23 7.77 -12.39 -0.10 1.13 16 13 O -0.53 -3.13 15.93 5.30 0.08 -3.04 16 14 N -0.71 0.52 5.21 -54.00 -0.28 0.24 16 15 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 16 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 17 C -0.15 0.17 7.44 -25.82 -0.19 -0.02 16 18 C -0.15 0.35 3.99 -89.71 -0.36 -0.01 16 19 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 20 C 0.07 -0.13 7.39 37.16 0.27 0.15 16 21 F -0.22 -0.44 17.36 2.25 0.04 -0.41 16 22 C -0.14 0.44 7.38 -25.92 -0.19 0.25 16 23 C -0.08 0.10 9.52 -39.24 -0.37 -0.27 16 24 C -0.12 0.13 9.41 -39.32 -0.37 -0.24 16 25 C -0.10 0.08 9.43 -39.24 -0.37 -0.29 16 26 C -0.12 0.11 8.65 -39.63 -0.34 -0.23 16 27 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 28 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 29 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 30 H -0.26 -0.13 7.00 56.52 0.40 0.26 16 31 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 32 H 0.13 -0.31 6.19 -52.49 -0.33 -0.64 16 33 H 0.14 -0.29 6.19 -52.49 -0.32 -0.61 16 34 H 0.14 0.14 7.64 -52.48 -0.40 -0.26 16 35 H 0.40 -1.29 6.72 -40.82 -0.27 -1.56 16 36 H 0.10 -0.17 7.90 -51.93 -0.41 -0.58 16 37 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 38 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 39 H 0.08 -0.23 7.85 -51.93 -0.41 -0.63 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 41 H 0.10 -0.42 8.10 -51.93 -0.42 -0.84 16 42 H 0.13 -0.51 6.39 -52.49 -0.34 -0.84 16 43 H 0.13 -0.40 6.19 -52.49 -0.32 -0.73 16 44 H 0.13 -0.34 6.19 -52.49 -0.33 -0.66 16 45 H 0.13 -0.32 4.82 -52.48 -0.25 -0.57 16 LS Contribution 373.40 15.07 5.63 5.63 Total: 0.00 -8.49 373.40 -11.70 -20.19 By element: Atomic # 1 Polarization: -6.52 SS G_CDS: -5.52 Total: -12.04 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -6.12 Total: -3.67 kcal Atomic # 7 Polarization: 0.52 SS G_CDS: -0.28 Total: 0.24 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.37 Total: -3.93 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.08 Total: -6.01 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -8.49 -11.70 -20.19 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_13158362.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.377 kcal (2) G-P(sol) polarization free energy of solvation -8.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.700 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds