Wall clock time and date at job start Sun Mar 7 2021 04:08:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38979 * 119.95483 * 2 1 4 4 O 1.35712 * 119.91278 * 0.02562 * 3 2 1 5 5 C 1.39017 * 120.17572 * 180.27431 * 3 2 1 6 6 C 1.50699 * 119.95734 * 179.72581 * 5 3 2 7 7 O 1.42907 * 109.46603 * 74.73147 * 6 5 3 8 8 Si 1.86298 * 109.47032 * 194.72450 * 6 5 3 9 9 C 1.37687 * 120.08606 * 359.45170 * 5 3 2 10 10 C 1.39758 * 119.91136 * 0.27911 * 9 5 3 11 11 C 1.47599 * 120.08447 * 179.97438 * 10 9 5 12 12 O 1.21581 * 120.00487 * 359.97438 * 11 10 9 13 13 N 1.34779 * 119.99488 * 179.97438 * 11 10 9 14 14 C 1.46500 * 119.99637 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.85288 * 23.80447 * 14 13 11 16 16 C 1.53785 * 113.61306 * 155.00145 * 14 13 11 17 17 C 1.53783 * 87.08330 * 89.11687 * 16 14 13 18 18 H 1.09000 * 113.60895 * 270.80393 * 17 16 14 19 19 C 1.52996 * 113.61650 * 139.98278 * 17 16 14 20 20 F 1.39903 * 109.47181 * 179.97438 * 19 17 16 21 21 C 1.53786 * 113.61320 * 252.49703 * 14 13 11 22 22 C 1.37719 * 119.95747 * 179.72998 * 2 1 3 23 23 H 1.08994 * 109.46712 * 270.27266 * 1 2 3 24 24 H 1.08998 * 109.46791 * 30.27108 * 1 2 3 25 25 H 1.09002 * 109.46894 * 150.26959 * 1 2 3 26 26 H 0.96693 * 113.99944 * 270.27447 * 4 3 2 27 27 H 1.08996 * 109.47117 * 314.73060 * 6 5 3 28 28 H 0.96697 * 114.00527 * 59.99993 * 7 6 5 29 29 H 1.48506 * 109.99834 * 58.68765 * 8 6 5 30 30 H 1.48502 * 110.00011 * 180.02562 * 8 6 5 31 31 H 1.08000 * 120.04166 * 180.28808 * 9 5 3 32 32 H 0.96993 * 120.00369 * 359.97438 * 13 11 10 33 33 H 1.09005 * 113.61223 * 203.66435 * 16 14 13 34 34 H 1.08998 * 113.61090 * 334.56375 * 16 14 13 35 35 H 1.09001 * 109.46848 * 299.99977 * 19 17 16 36 36 H 1.08996 * 109.46966 * 59.99635 * 19 17 16 37 37 H 1.08991 * 113.61594 * 25.43211 * 21 14 13 38 38 H 1.09000 * 113.61043 * 156.33702 * 21 14 13 39 39 H 1.08005 * 120.04391 * 359.97438 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3779 0.0005 5 6 3.5912 1.2095 -0.0058 6 6 4.3386 2.5181 -0.0120 7 8 4.2721 3.1107 1.2867 8 14 6.1198 2.2136 -0.4650 9 6 4.2860 0.0208 -0.0001 10 6 3.5919 -1.1922 0.0056 11 6 4.3329 -2.4686 0.0111 12 8 5.5487 -2.4659 0.0103 13 7 3.6616 -3.6374 0.0171 14 6 4.3971 -4.9044 0.0231 15 1 5.4045 -4.8071 0.4278 16 6 3.6020 -6.0753 0.6246 17 6 3.0625 -6.3339 -0.7920 18 1 2.1497 -5.7831 -1.0188 19 6 2.9650 -7.8184 -1.1492 20 9 2.4664 -7.9534 -2.4494 21 6 4.3394 -5.6565 -1.3170 22 6 2.1948 -1.1932 0.0056 23 1 -0.3632 0.0049 1.0276 24 1 -0.3633 0.8875 -0.5180 25 1 -0.3633 -0.8924 -0.5097 26 1 1.3183 2.7161 -0.8826 27 1 3.8878 3.1905 -0.7418 28 1 4.6558 2.5662 1.9877 29 1 6.2011 1.5683 -1.8001 30 1 6.8680 3.4963 -0.4741 31 1 5.3660 0.0259 0.0001 32 1 2.6917 -3.6396 0.0181 33 1 4.2309 -6.8798 1.0060 34 1 2.8352 -5.7637 1.3338 35 1 3.9543 -8.2720 -1.0901 36 1 2.2942 -8.3171 -0.4496 37 1 4.1679 -5.0070 -2.1752 38 1 5.1699 -6.3466 -1.4664 39 1 1.6548 -2.1285 0.0104 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15781660_13287732.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:08 Heat of formation + Delta-G solvation = -111.165459 kcal Electronic energy + Delta-G solvation = -23779.994163 eV Core-core repulsion = 19990.382687 eV Total energy + Delta-G solvation = -3789.611475 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -48.54653 -41.86264 -40.96429 -39.40141 -37.84444 -37.49848 -34.75779 -34.03123 -31.86312 -29.47775 -28.15164 -26.92796 -26.90934 -25.18926 -23.62037 -22.16046 -21.68673 -20.52044 -19.62954 -18.86070 -18.11873 -17.40637 -17.15559 -16.93170 -16.86034 -16.68102 -16.34152 -16.00757 -15.88660 -15.57243 -15.34653 -14.87372 -14.62319 -14.46387 -14.16536 -14.00489 -13.87643 -13.71912 -13.48456 -13.38420 -13.10248 -12.84653 -12.33960 -12.26721 -12.01777 -11.98425 -11.68356 -11.66445 -11.27069 -11.04083 -10.42571 -10.22681 -10.04906 -9.72921 -4.99994 -0.44812 0.00238 1.25112 1.59010 1.66503 1.91391 1.96375 2.52154 2.98423 3.18219 3.23954 3.31617 3.42099 3.47224 3.50389 3.62937 3.66921 3.87778 3.94436 4.03009 4.10493 4.18153 4.21275 4.36928 4.46780 4.47373 4.51953 4.52435 4.55929 4.59187 4.69544 4.85621 4.89885 4.92487 4.99857 5.02301 5.02813 5.20411 5.40560 5.47909 6.32578 6.49554 6.57411 7.07901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.117 4.117 3 C 0.161 3.839 4 O -0.482 6.482 5 C -0.151 4.151 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.044 4.044 10 C -0.139 4.139 11 C 0.565 3.435 12 O -0.528 6.528 13 N -0.710 5.710 14 C 0.121 3.879 15 H 0.110 0.890 16 C -0.137 4.137 17 C -0.148 4.148 18 H 0.100 0.900 19 C 0.070 3.930 20 F -0.217 7.217 21 C -0.146 4.146 22 C -0.066 4.066 23 H 0.077 0.923 24 H 0.071 0.929 25 H 0.069 0.931 26 H 0.392 0.608 27 H 0.112 0.888 28 H 0.378 0.622 29 H -0.254 1.254 30 H -0.249 1.249 31 H 0.146 0.854 32 H 0.400 0.600 33 H 0.102 0.898 34 H 0.080 0.920 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.076 0.924 38 H 0.096 0.904 39 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.783 -3.098 1.503 4.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.118 4.118 3 C 0.115 3.885 4 O -0.293 6.293 5 C -0.152 4.152 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.062 4.062 10 C -0.142 4.142 11 C 0.353 3.647 12 O -0.405 6.405 13 N -0.362 5.362 14 C 0.015 3.985 15 H 0.128 0.872 16 C -0.175 4.175 17 C -0.167 4.167 18 H 0.118 0.882 19 C 0.015 3.985 20 F -0.199 7.199 21 C -0.184 4.184 22 C -0.085 4.085 23 H 0.095 0.905 24 H 0.090 0.910 25 H 0.088 0.912 26 H 0.250 0.750 27 H 0.129 0.871 28 H 0.225 0.775 29 H -0.179 1.179 30 H -0.174 1.174 31 H 0.163 0.837 32 H 0.236 0.764 33 H 0.120 0.880 34 H 0.098 0.902 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.094 0.906 38 H 0.115 0.885 39 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.516 -2.504 1.165 3.150 hybrid contribution -1.279 0.081 -0.783 1.502 sum -2.796 -2.422 0.383 3.719 Atomic orbital electron populations 1.20701 0.89642 1.03158 1.03191 1.20226 0.97347 0.92097 1.02131 1.18329 0.88824 0.85277 0.96080 1.84823 1.75597 1.35660 1.33223 1.20698 0.93936 0.96069 1.04546 1.24865 1.09362 0.92741 0.89628 1.86557 1.84547 1.46577 1.15928 0.94653 0.77295 0.83821 0.86459 1.20946 1.00012 0.90119 0.95168 1.19785 0.93446 0.93341 1.07629 1.18123 0.87246 0.83469 0.75913 1.90814 1.13209 1.87420 1.49039 1.45563 1.10103 1.04972 1.75520 1.21835 0.97365 0.82227 0.97061 0.87200 1.23307 1.00228 0.98182 0.95785 1.23279 0.99699 0.96122 0.97608 0.88185 1.22011 1.00231 0.96436 0.79782 1.92785 1.89644 1.96985 1.40450 1.23503 0.97413 0.99489 0.98011 1.21084 0.92567 0.97807 0.97004 0.90457 0.90996 0.91188 0.74987 0.87070 0.77496 1.17878 1.17374 0.83719 0.76372 0.87978 0.90172 0.90453 0.90590 0.90561 0.88546 0.85054 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.78 36.01 0.35 0.61 16 2 C -0.12 0.09 5.89 -104.53 -0.62 -0.53 16 3 C 0.16 0.06 6.66 -39.02 -0.26 -0.20 16 4 O -0.48 -0.03 11.85 -18.84 -0.22 -0.26 16 5 C -0.15 -0.07 5.27 -104.54 -0.55 -0.62 16 6 C -0.05 -0.02 2.37 36.01 0.09 0.07 16 7 O -0.53 -0.68 12.88 -35.23 -0.45 -1.13 16 8 Si 0.68 0.08 29.91 -169.99 -5.08 -5.01 16 9 C -0.04 -0.03 8.20 -39.21 -0.32 -0.35 16 10 C -0.14 -0.05 5.87 -104.96 -0.62 -0.67 16 11 C 0.56 0.80 7.76 -12.44 -0.10 0.70 16 12 O -0.53 -2.54 15.94 5.29 0.08 -2.45 16 13 N -0.71 1.00 5.21 -54.03 -0.28 0.71 16 14 C 0.12 -0.19 4.32 -67.11 -0.29 -0.48 16 15 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 16 C -0.14 0.51 7.39 -25.92 -0.19 0.32 16 17 C -0.15 0.42 3.97 -89.81 -0.36 0.06 16 18 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 19 C 0.07 -0.15 7.35 37.16 0.27 0.12 16 20 F -0.22 -0.38 17.36 2.25 0.04 -0.34 16 21 C -0.15 0.24 7.43 -25.91 -0.19 0.05 16 22 C -0.07 0.09 9.18 -39.22 -0.36 -0.27 16 23 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 24 H 0.07 -0.18 7.53 -51.93 -0.39 -0.57 16 25 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 26 H 0.39 -1.63 9.06 45.56 0.41 -1.22 16 27 H 0.11 0.02 7.83 -51.93 -0.41 -0.39 16 28 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 29 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 30 H -0.25 -0.73 7.11 56.52 0.40 -0.32 16 31 H 0.15 0.03 4.70 -52.49 -0.25 -0.22 16 32 H 0.40 -1.53 6.72 -40.82 -0.27 -1.81 16 33 H 0.10 -0.47 8.10 -51.93 -0.42 -0.89 16 34 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 35 H 0.08 -0.26 7.94 -51.93 -0.41 -0.67 16 36 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 37 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 38 H 0.10 -0.21 7.96 -51.93 -0.41 -0.62 16 39 H 0.13 -0.55 6.39 -52.48 -0.34 -0.89 16 LS Contribution 330.01 15.07 4.97 4.97 Total: 0.00 -9.03 330.01 -8.30 -17.33 By element: Atomic # 1 Polarization: -8.44 SS G_CDS: -4.21 Total: -12.65 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -3.14 Total: -1.18 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.28 Total: 0.71 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.59 Total: -3.84 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: 0.08 SS G_CDS: -5.08 Total: -5.01 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -9.03 -8.30 -17.33 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_13287732.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.837 kcal (2) G-P(sol) polarization free energy of solvation -9.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.328 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds