Wall clock time and date at job start Sun Mar 7 2021 04:08:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39043 * 110.99815 * 236.04799 * 2 1 3 5 5 C 1.39203 * 119.93121 * 240.00456 * 4 2 1 6 6 C 1.50697 * 119.96538 * 359.97438 * 5 4 2 7 7 O 1.42898 * 109.46900 * 75.00138 * 6 5 4 8 8 Si 1.86299 * 109.47352 * 195.00366 * 6 5 4 9 9 C 1.37633 * 120.06886 * 179.97438 * 5 4 2 10 10 C 1.39773 * 119.93025 * 0.02562 * 9 5 4 11 11 C 1.47524 * 120.06743 * 180.02562 * 10 9 5 12 12 O 1.21599 * 120.00073 * 359.97438 * 11 10 9 13 13 N 1.34772 * 119.99834 * 180.02562 * 11 10 9 14 14 C 1.46501 * 119.99738 * 179.97438 * 13 11 10 15 15 H 1.08994 * 112.85349 * 334.66473 * 14 13 11 16 16 C 1.53777 * 113.61564 * 105.86224 * 14 13 11 17 17 C 1.54055 * 86.98673 * 89.15782 * 16 14 13 18 18 H 1.08994 * 113.61615 * 270.88503 * 17 16 14 19 19 C 1.53001 * 113.69128 * 139.99048 * 17 16 14 20 20 F 1.39895 * 109.47269 * 87.47062 * 19 17 16 21 21 C 1.53778 * 87.07707 * 25.43352 * 17 16 14 22 22 C 1.39820 * 119.86172 * 0.02562 * 10 9 5 23 23 C 1.37582 * 119.93048 * 359.69969 * 22 10 9 24 24 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 25 25 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 26 26 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 27 27 H 1.09007 * 109.46909 * 60.00094 * 3 2 1 28 28 H 1.08998 * 109.47110 * 179.97438 * 3 2 1 29 29 H 1.09002 * 109.47061 * 300.00284 * 3 2 1 30 30 H 1.09006 * 109.47281 * 315.00631 * 6 5 4 31 31 H 0.96693 * 114.00703 * 300.00214 * 7 6 5 32 32 H 1.48500 * 109.99905 * 59.99850 * 8 6 5 33 33 H 1.48501 * 110.00085 * 181.31865 * 8 6 5 34 34 H 1.08000 * 120.03467 * 179.97438 * 9 5 4 35 35 H 0.97000 * 120.00618 * 359.97438 * 13 11 10 36 36 H 1.08999 * 113.61684 * 203.66130 * 16 14 13 37 37 H 1.08998 * 113.61525 * 334.56900 * 16 14 13 38 38 H 1.09003 * 109.46961 * 207.46834 * 19 17 16 39 39 H 1.08994 * 109.47322 * 327.46502 * 19 17 16 40 40 H 1.08994 * 113.61660 * 220.02579 * 21 17 16 41 41 H 1.08998 * 113.61420 * 89.11319 * 21 17 16 42 42 H 1.08002 * 120.02916 * 180.02562 * 22 10 9 43 43 H 1.08002 * 119.96336 * 180.29518 * 23 22 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7250 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1173 -2.2448 0.5578 7 8 1.9822 -2.8746 1.1552 8 14 4.5471 -3.4388 0.5301 9 6 3.2735 -2.5531 -1.9156 10 6 2.9599 -2.1702 -3.2228 11 6 3.4876 -2.9401 -4.3652 12 8 4.1966 -3.9086 -4.1702 13 7 3.1847 -2.5694 -5.6251 14 6 3.7092 -3.3337 -6.7596 15 1 4.6317 -3.8637 -6.5227 16 6 2.6538 -4.2129 -7.4508 17 6 2.3441 -2.9968 -8.3445 18 1 1.5807 -2.3362 -7.9337 19 6 2.0908 -3.3590 -9.8093 20 9 0.7372 -3.6644 -9.9868 21 6 3.7812 -2.5256 -8.0661 22 6 2.1449 -1.0561 -3.4454 23 6 1.6493 -0.3439 -2.3777 24 1 -0.3634 -1.0252 0.0708 25 1 -0.3633 0.4513 -0.9233 26 1 -0.3633 0.5740 0.8525 27 1 1.6461 1.8947 0.8901 28 1 3.0851 1.3422 0.0005 29 1 1.6460 1.8948 -0.8900 30 1 3.3911 -1.3635 1.1380 31 1 1.1988 -2.3099 1.2031 32 1 5.7339 -2.7957 -0.0890 33 1 4.8698 -3.8770 1.9118 34 1 3.9037 -3.4125 -1.7405 35 1 2.6195 -1.7967 -5.7807 36 1 3.0771 -5.0576 -7.9943 37 1 1.8285 -4.4986 -6.7986 38 1 2.3590 -2.5144 -10.4440 39 1 2.6969 -4.2236 -10.0798 40 1 3.8656 -1.4502 -7.9102 41 1 4.5122 -2.9099 -8.7774 42 1 1.9005 -0.7581 -4.4543 43 1 1.0159 0.5140 -2.5489 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15781660_13422196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:08:25 Heat of formation + Delta-G solvation = -52.565713 kcal Electronic energy + Delta-G solvation = -25694.976150 eV Core-core repulsion = 21850.086794 eV Total energy + Delta-G solvation = -3844.889357 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.153 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.53598 -41.85325 -40.99294 -39.39841 -37.68578 -37.25706 -34.71827 -32.75921 -31.43235 -29.47900 -28.80256 -26.95155 -26.90595 -26.24395 -24.01675 -23.30394 -22.94190 -21.35133 -20.50130 -19.15632 -17.98714 -17.91109 -17.45595 -17.18444 -16.84959 -16.71474 -16.46562 -16.36260 -16.02756 -15.83988 -15.52782 -15.32150 -15.12636 -14.75573 -14.54970 -14.13695 -13.96898 -13.86761 -13.72471 -13.62912 -13.47181 -13.15120 -13.09783 -12.89070 -12.73931 -12.24504 -11.98734 -11.92070 -11.63801 -11.32047 -11.25828 -11.15127 -10.92639 -10.20753 -10.12914 -9.86957 -9.77261 -4.74840 -0.43510 0.10380 1.48506 1.65135 1.77619 1.94248 2.08852 2.57817 2.61103 3.19106 3.25338 3.44034 3.45391 3.54187 3.62832 3.67858 3.85993 3.95008 3.96043 4.03773 4.05586 4.11819 4.13758 4.20143 4.31099 4.33880 4.38174 4.47227 4.51997 4.54180 4.55654 4.65171 4.71486 4.72956 4.75150 4.88294 4.92506 4.95882 5.03710 5.07699 5.16672 5.42778 5.49408 5.55860 6.07960 6.35379 6.67279 7.11233 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.518 5.518 3 C 0.026 3.974 4 C 0.125 3.875 5 C -0.099 4.099 6 C -0.062 4.062 7 O -0.533 6.533 8 Si 0.730 3.270 9 C -0.042 4.042 10 C -0.133 4.133 11 C 0.563 3.437 12 O -0.526 6.526 13 N -0.710 5.710 14 C 0.121 3.879 15 H 0.109 0.891 16 C -0.145 4.145 17 C -0.148 4.148 18 H 0.100 0.900 19 C 0.070 3.930 20 F -0.218 7.218 21 C -0.137 4.137 22 C -0.072 4.072 23 C -0.153 4.153 24 H 0.075 0.925 25 H 0.036 0.964 26 H 0.079 0.921 27 H 0.079 0.921 28 H 0.071 0.929 29 H 0.035 0.965 30 H 0.080 0.920 31 H 0.365 0.635 32 H -0.251 1.251 33 H -0.252 1.252 34 H 0.147 0.853 35 H 0.400 0.600 36 H 0.096 0.904 37 H 0.077 0.923 38 H 0.076 0.924 39 H 0.078 0.922 40 H 0.079 0.921 41 H 0.102 0.898 42 H 0.128 0.872 43 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.425 4.586 -2.738 5.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.239 5.239 3 C -0.120 4.120 4 C 0.031 3.969 5 C -0.100 4.100 6 C -0.171 4.171 7 O -0.338 6.338 8 Si 0.629 3.371 9 C -0.061 4.061 10 C -0.137 4.137 11 C 0.351 3.649 12 O -0.402 6.402 13 N -0.362 5.362 14 C 0.015 3.985 15 H 0.127 0.873 16 C -0.184 4.184 17 C -0.167 4.167 18 H 0.118 0.882 19 C 0.015 3.985 20 F -0.199 7.199 21 C -0.175 4.175 22 C -0.091 4.091 23 C -0.173 4.173 24 H 0.094 0.906 25 H 0.054 0.946 26 H 0.098 0.902 27 H 0.098 0.902 28 H 0.090 0.910 29 H 0.054 0.946 30 H 0.098 0.902 31 H 0.213 0.787 32 H -0.175 1.175 33 H -0.177 1.177 34 H 0.164 0.836 35 H 0.236 0.764 36 H 0.115 0.885 37 H 0.095 0.905 38 H 0.094 0.906 39 H 0.096 0.904 40 H 0.097 0.903 41 H 0.120 0.880 42 H 0.146 0.854 43 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.441 3.018 -1.832 3.558 hybrid contribution -1.525 2.562 -0.609 3.043 sum -1.084 5.580 -2.441 6.186 Atomic orbital electron populations 1.22555 0.84940 1.03243 1.01650 1.59465 1.09092 1.14810 1.40513 1.22490 1.01055 0.86795 1.01678 1.18848 0.95489 0.93605 0.89005 1.20262 0.98330 0.94831 0.96573 1.25280 0.97899 1.04454 0.89476 1.86729 1.22171 1.42738 1.82191 0.92888 0.73711 0.86808 0.83724 1.21039 0.96699 0.97876 0.90474 1.19864 1.02241 0.97936 0.93615 1.18138 0.80119 0.83985 0.82671 1.90824 1.37048 1.27198 1.85170 1.45566 1.52993 1.32594 1.05059 1.21820 0.98258 0.93487 0.84887 0.87298 1.23565 0.99691 0.96756 0.98383 1.23334 0.98355 0.99550 0.95452 0.88176 1.22021 0.78054 1.01917 0.96468 1.92783 1.35596 1.94965 1.96531 1.23303 0.96299 1.01068 0.96849 1.21142 0.95205 0.93635 0.99126 1.21581 1.01812 1.01151 0.92790 0.90639 0.94560 0.90197 0.90243 0.90993 0.94618 0.90231 0.78675 1.17497 1.17670 0.83596 0.76416 0.88535 0.90472 0.90607 0.90424 0.90254 0.87983 0.85416 0.85257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.20 60.07 0.55 0.50 16 2 N -0.52 0.50 3.67 -186.86 -0.69 -0.19 16 3 C 0.03 -0.05 9.32 60.06 0.56 0.51 16 4 C 0.13 0.01 4.65 -83.86 -0.39 -0.38 16 5 C -0.10 -0.12 5.28 -104.49 -0.55 -0.67 16 6 C -0.06 -0.10 2.29 36.00 0.08 -0.01 16 7 O -0.53 -1.18 12.65 -35.23 -0.45 -1.62 16 8 Si 0.73 1.21 30.17 -169.99 -5.13 -3.92 16 9 C -0.04 -0.07 8.19 -39.23 -0.32 -0.39 16 10 C -0.13 -0.12 5.88 -104.95 -0.62 -0.73 16 11 C 0.56 1.06 7.76 -12.48 -0.10 0.96 16 12 O -0.53 -2.81 15.95 5.28 0.08 -2.73 16 13 N -0.71 0.77 5.21 -54.06 -0.28 0.48 16 14 C 0.12 -0.16 4.30 -67.11 -0.29 -0.45 16 15 H 0.11 0.02 7.50 -51.93 -0.39 -0.37 16 16 C -0.15 0.21 7.45 -25.78 -0.19 0.02 16 17 C -0.15 0.39 3.98 -89.66 -0.36 0.03 16 18 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 19 C 0.07 -0.14 7.39 37.16 0.27 0.14 16 20 F -0.22 -0.41 17.36 2.25 0.04 -0.37 16 21 C -0.14 0.48 7.38 -25.92 -0.19 0.29 16 22 C -0.07 0.10 9.53 -39.23 -0.37 -0.28 16 23 C -0.15 0.17 8.57 -39.45 -0.34 -0.17 16 24 H 0.07 -0.18 7.84 -51.93 -0.41 -0.59 16 25 H 0.04 -0.10 7.08 -51.93 -0.37 -0.47 16 26 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 27 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 28 H 0.07 -0.09 8.12 -51.93 -0.42 -0.51 16 29 H 0.04 -0.09 7.46 -51.93 -0.39 -0.47 16 30 H 0.08 0.12 7.78 -51.93 -0.40 -0.28 16 31 H 0.37 0.08 8.06 45.56 0.37 0.45 16 32 H -0.25 -0.79 7.11 56.52 0.40 -0.38 16 33 H -0.25 -1.03 7.11 56.52 0.40 -0.63 16 34 H 0.15 0.23 4.70 -52.49 -0.25 -0.02 16 35 H 0.40 -1.42 6.72 -40.82 -0.27 -1.69 16 36 H 0.10 -0.20 7.91 -51.93 -0.41 -0.61 16 37 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 39 H 0.08 -0.24 7.85 -51.93 -0.41 -0.65 16 40 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 41 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 42 H 0.13 -0.53 6.39 -52.49 -0.34 -0.87 16 43 H 0.13 -0.34 7.01 -52.49 -0.37 -0.71 16 LS Contribution 351.78 15.07 5.30 5.30 Total: 0.00 -6.62 351.78 -9.57 -16.19 By element: Atomic # 1 Polarization: -6.30 SS G_CDS: -6.21 Total: -12.51 kcal Atomic # 6 Polarization: 1.61 SS G_CDS: -2.25 Total: -0.64 kcal Atomic # 7 Polarization: 1.26 SS G_CDS: -0.97 Total: 0.30 kcal Atomic # 8 Polarization: -3.99 SS G_CDS: -0.36 Total: -4.35 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: 1.21 SS G_CDS: -5.13 Total: -3.92 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -6.62 -9.57 -16.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_13422196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.380 kcal (2) G-P(sol) polarization free energy of solvation -6.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.186 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds