Wall clock time and date at job start Sun Mar 7 2021 04:09:48
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
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* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.50697 * 1
3 3 C 1.33816 * 122.45116 * 2 1
4 4 C 1.50698 * 124.52025 * 359.93585 * 3 2 1
5 5 O 1.42900 * 109.47198 * 30.00733 * 4 3 2
6 6 Si 1.86305 * 109.47016 * 150.00149 * 4 3 2
7 7 S 1.70618 * 110.95520 * 179.69860 * 3 2 1
8 8 C 1.75828 * 91.56383 * 0.35104 * 7 3 2
9 9 C 1.46586 * 125.45980 * 179.91112 * 8 7 3
10 10 O 1.21695 * 120.00073 * 179.69781 * 9 8 7
11 11 N 1.34780 * 119.99786 * 359.69529 * 9 8 7
12 12 C 1.46491 * 119.99896 * 179.97438 * 11 9 8
13 13 H 1.09007 * 112.85169 * 336.19716 * 12 11 9
14 14 C 1.53781 * 113.61823 * 107.50639 * 12 11 9
15 15 C 1.53778 * 87.08350 * 89.11476 * 14 12 11
16 16 H 1.09006 * 113.68879 * 270.87834 * 15 14 12
17 17 C 1.52997 * 113.61618 * 139.98387 * 15 14 12
18 18 F 1.39901 * 109.47234 * 202.50740 * 17 15 14
19 19 C 1.53784 * 113.61429 * 205.00439 * 12 11 9
20 20 C 1.36649 * 109.08365 * 359.65092 * 8 7 3
21 21 H 1.08995 * 109.47655 * 270.00017 * 1 2 3
22 22 H 1.09001 * 109.47068 * 30.00541 * 1 2 3
23 23 H 1.08999 * 109.46781 * 150.00014 * 1 2 3
24 24 H 1.08997 * 109.47572 * 270.00415 * 4 3 2
25 25 H 0.96701 * 114.00453 * 59.99730 * 5 4 3
26 26 H 1.48499 * 109.99691 * 58.68290 * 6 4 3
27 27 H 1.48495 * 109.99971 * 180.02562 * 6 4 3
28 28 H 0.97002 * 119.99636 * 0.02562 * 11 9 8
29 29 H 1.09005 * 113.60973 * 334.56447 * 14 12 11
30 30 H 1.08994 * 113.61913 * 203.66394 * 14 12 11
31 31 H 1.09002 * 109.47153 * 82.50316 * 17 15 14
32 32 H 1.09001 * 109.46832 * 322.50507 * 17 15 14
33 33 H 1.09001 * 113.61189 * 156.33903 * 19 12 11
34 34 H 1.08999 * 113.69374 * 25.43941 * 19 12 11
35 35 H 1.07995 * 123.35332 * 180.28398 * 20 8 7
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5070 0.0000 0.0000
3 6 2.2250 1.1292 0.0000
4 6 1.6355 2.5161 -0.0014
5 8 0.3748 2.4985 0.6712
6 14 2.7917 3.6832 0.8772
7 16 3.8969 0.7892 0.0084
8 6 3.5937 -0.9427 0.0012
9 6 4.6231 -1.9863 0.0018
10 8 4.3002 -3.1596 0.0020
11 7 5.9273 -1.6463 0.0022
12 6 6.9561 -2.6892 0.0034
13 1 6.5989 -3.6357 0.4093
14 6 7.6911 -2.8311 -1.3399
15 6 8.6829 -1.7776 -0.8190
16 1 8.3907 -0.7519 -1.0442
17 6 10.1392 -2.0740 -1.1826
18 9 10.9872 -1.4122 -0.2881
19 6 8.2976 -2.2305 0.5993
20 6 2.2446 -1.1601 0.0007
21 1 -0.3634 0.0000 1.0276
22 1 -0.3633 0.8899 -0.5139
23 1 -0.3633 -0.8900 -0.5138
24 1 1.4942 2.8499 -1.0293
25 1 0.4247 2.2106 1.5930
26 1 4.1165 3.6865 0.2063
27 1 2.2215 5.0543 0.8833
28 1 6.1847 -0.7111 0.0024
29 1 7.1058 -2.4944 -2.1956
30 1 8.1377 -3.8137 -1.4917
31 1 10.3383 -1.7270 -2.1965
32 1 10.3167 -3.1479 -1.1246
33 1 8.9099 -3.0490 0.9776
34 1 8.2033 -1.4090 1.3094
35 1 1.8019 -2.1452 0.0011
There are 49 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 49
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990)
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_15781660_6739946.mol2 35
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 04:09:48
Heat of formation + Delta-G solvation = -61.240993 kcal
Electronic energy + Delta-G solvation = -20090.535818 eV
Core-core repulsion = 16710.923669 eV
Total energy + Delta-G solvation = -3379.612150 eV
No. of doubly occupied orbitals = 49
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 286.083 amu
Computer time = 0.55 seconds
Orbital eigenvalues (eV)
-48.53248 -41.42007 -40.14361 -39.24387 -37.28646 -34.72264 -32.15242 -30.22514
-29.55121 -26.74971 -26.56909 -24.67761 -23.52097 -22.07931 -20.55809 -20.04611
-19.52064 -17.72877 -17.48675 -17.14240 -16.87287 -16.74235 -16.48790 -16.37009
-16.01325 -15.91034 -15.37074 -14.79520 -14.56671 -14.49144 -13.97881 -13.84734
-13.59552 -13.45461 -13.32422 -13.10647 -12.96343 -12.45328 -12.32315 -12.21427
-11.79376 -11.72603 -11.56262 -11.31985 -11.18075 -10.68504 -10.29687 -9.71016
-9.45108 -5.07805 -0.70866 0.23935 0.66663 1.08688 1.30228 1.52945
1.88062 1.88715 2.00565 3.32459 3.35441 3.37265 3.55448 3.62197
3.67572 3.77218 4.07709 4.08518 4.19686 4.24494 4.36571 4.43411
4.55322 4.59093 4.69871 4.74056 4.81231 4.83584 4.90765 4.97558
5.00904 5.04182 5.08161 5.37794 5.46189 5.47569 6.25181 6.66062
6.94008
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.092 4.092
2 C -0.099 4.099
3 C -0.233 4.233
4 C -0.030 4.030
5 O -0.539 6.539
6 Si 0.727 3.273
7 S 0.232 5.768
8 C -0.285 4.285
9 C 0.593 3.407
10 O -0.568 6.568
11 N -0.699 5.699
12 C 0.111 3.889
13 H 0.093 0.907
14 C -0.136 4.136
15 C -0.142 4.142
16 H 0.103 0.897
17 C 0.064 3.936
18 F -0.236 7.236
19 C -0.131 4.131
20 C -0.053 4.053
21 H 0.085 0.915
22 H 0.080 0.920
23 H 0.060 0.940
24 H 0.123 0.877
25 H 0.396 0.604
26 H -0.255 1.255
27 H -0.273 1.273
28 H 0.409 0.591
29 H 0.071 0.929
30 H 0.109 0.891
31 H 0.087 0.913
32 H 0.090 0.910
33 H 0.107 0.893
34 H 0.081 0.919
35 H 0.148 0.852
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 1.091 2.594 1.179 3.051
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.151 4.151
2 C -0.111 4.111
3 C -0.352 4.352
4 C -0.142 4.142
5 O -0.347 6.347
6 Si 0.630 3.370
7 S 0.501 5.499
8 C -0.404 4.404
9 C 0.381 3.619
10 O -0.448 6.448
11 N -0.350 5.350
12 C 0.005 3.995
13 H 0.111 0.889
14 C -0.174 4.174
15 C -0.161 4.161
16 H 0.122 0.878
17 C 0.010 3.990
18 F -0.217 7.217
19 C -0.169 4.169
20 C -0.087 4.087
21 H 0.104 0.896
22 H 0.099 0.901
23 H 0.079 0.921
24 H 0.140 0.860
25 H 0.246 0.754
26 H -0.181 1.181
27 H -0.198 1.198
28 H 0.246 0.754
29 H 0.090 0.910
30 H 0.127 0.873
31 H 0.105 0.895
32 H 0.109 0.891
33 H 0.125 0.875
34 H 0.100 0.900
35 H 0.165 0.835
Dipole moment (debyes) X Y Z Total
from point charges 2.536 3.612 0.581 4.451
hybrid contribution -1.409 -0.821 -0.614 1.743
sum 1.127 2.791 -0.033 3.010
Atomic orbital electron populations
1.20632 0.87792 1.03023 1.03618 1.18777 0.99026 0.90183 1.03129
1.24686 0.98629 1.01286 1.10648 1.24582 0.92592 0.94722 1.02340
1.86509 1.27488 1.90092 1.30588 0.93983 0.75943 0.77907 0.89183
1.82846 1.02836 0.96052 1.68215 1.24522 0.97740 0.98197 1.19978
1.17167 0.82348 0.87133 0.75288 1.90827 1.82259 1.19936 1.51824
1.45470 1.04445 1.10514 1.74555 1.21954 0.87346 0.91788 0.98364
0.88878 1.23397 0.96786 1.00285 0.96967 1.23221 0.94497 1.00856
0.97529 0.87848 1.22174 0.86859 0.97906 0.92090 1.92741 1.73407
1.83811 1.71740 1.23310 0.94434 1.02649 0.96513 1.20827 0.91192
1.00433 0.96256 0.89637 0.90127 0.92111 0.86002 0.75354 1.18057
1.19829 0.75446 0.91021 0.87253 0.89478 0.89143 0.87466 0.90048
0.83455
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.09 0.18 8.67 71.23 0.62 0.80 16
2 C -0.10 -0.03 5.75 -21.05 -0.12 -0.15 16
3 C -0.23 0.40 5.54 24.68 0.14 0.54 16
4 C -0.03 0.11 2.76 71.24 0.20 0.31 16
5 O -0.54 2.18 9.85 -148.98 -1.47 0.72 16
6 Si 0.73 -3.55 31.31 68.60 2.15 -1.41 16
7 S 0.23 -0.53 19.78 -56.49 -1.12 -1.64 16
8 C -0.28 -0.95 6.45 24.08 0.16 -0.79 16
9 C 0.59 3.89 7.78 86.42 0.67 4.56 16
10 O -0.57 -8.24 16.44 -4.33 -0.07 -8.31 16
11 N -0.70 -0.28 5.26 -444.09 -2.33 -2.62 16
12 C 0.11 -0.07 4.32 45.52 0.20 0.12 16
13 H 0.09 0.29 7.46 -2.38 -0.02 0.27 16
14 C -0.14 0.51 7.43 31.12 0.23 0.74 16
15 C -0.14 0.71 4.01 -10.27 -0.04 0.66 16
16 H 0.10 -0.60 8.14 -2.38 -0.02 -0.62 16
17 C 0.06 -0.28 7.40 71.98 0.53 0.25 16
18 F -0.24 -0.67 17.22 44.97 0.77 0.10 16
19 C -0.13 0.53 7.26 31.12 0.23 0.75 16
20 C -0.05 -0.19 9.80 21.72 0.21 0.03 16
21 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16
22 H 0.08 -0.06 6.41 -2.39 -0.02 -0.07 16
23 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16
24 H 0.12 -0.39 7.96 -2.39 -0.02 -0.41 16
25 H 0.40 -4.36 8.66 -74.06 -0.64 -5.00 16
26 H -0.25 0.48 7.09 99.48 0.71 1.19 16
27 H -0.27 -0.48 7.11 99.48 0.71 0.22 16
28 H 0.41 -1.68 7.81 -92.71 -0.72 -2.40 16
29 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16
30 H 0.11 -0.64 7.96 -2.39 -0.02 -0.66 16
31 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16
32 H 0.09 -0.63 7.94 -2.39 -0.02 -0.65 16
33 H 0.11 -0.53 8.10 -2.39 -0.02 -0.55 16
34 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16
35 H 0.15 0.65 8.06 -2.91 -0.02 0.63 16
Total: 0.00 -15.79 310.44 0.74 -15.04
By element:
Atomic # 1 Polarization: -9.51 SS G_CDS: -0.20 Total: -9.71 kcal
Atomic # 6 Polarization: 4.80 SS G_CDS: 3.02 Total: 7.82 kcal
Atomic # 7 Polarization: -0.28 SS G_CDS: -2.33 Total: -2.62 kcal
Atomic # 8 Polarization: -6.05 SS G_CDS: -1.54 Total: -7.59 kcal
Atomic # 9 Polarization: -0.67 SS G_CDS: 0.77 Total: 0.10 kcal
Atomic # 14 Polarization: -3.55 SS G_CDS: 2.15 Total: -1.41 kcal
Atomic # 16 Polarization: -0.53 SS G_CDS: -1.12 Total: -1.64 kcal
Total: -15.79 0.74 -15.04 kcal
The number of atoms in the molecule is 35
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_15781660_6739946.mol2 35
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -46.200 kcal
(2) G-P(sol) polarization free energy of solvation -15.786 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.986 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.745 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.041 kcal
(6) G-S(sol) free energy of system = (1) + (5) -61.241 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.55 seconds