Wall clock time and date at job start Sun Mar 7 2021 05:05:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 116.99940 * 2 1 4 4 C 1.38712 * 120.05375 * 179.97438 * 3 2 1 5 5 C 1.50699 * 120.03008 * 0.02562 * 4 3 2 6 6 H 1.09004 * 112.84479 * 348.52884 * 5 4 3 7 7 C 1.53778 * 113.61086 * 119.72066 * 5 4 3 8 8 C 1.53787 * 87.08035 * 140.06661 * 7 5 4 9 9 H 1.08994 * 113.61447 * 220.02014 * 8 7 5 10 10 N 1.46496 * 113.61210 * 89.11438 * 8 7 5 11 11 C 1.34774 * 120.00099 * 155.00440 * 10 8 7 12 12 O 1.21699 * 119.99730 * 359.97438 * 11 10 8 13 13 C 1.46676 * 120.00622 * 180.02562 * 11 10 8 14 14 C 1.37871 * 126.23625 * 180.02562 * 13 11 10 15 15 C 1.39845 * 107.08442 * 179.97438 * 14 13 11 16 16 C 1.50702 * 126.06623 * 180.02562 * 15 14 13 17 17 O 1.42899 * 109.47281 * 64.99549 * 16 15 14 18 18 Si 1.86294 * 109.46843 * 184.99878 * 16 15 14 19 19 C 1.35457 * 107.86331 * 359.97438 * 15 14 13 20 20 N 1.35536 * 108.87011 * 359.73929 * 19 15 14 21 21 C 1.53778 * 113.69101 * 217.25842 * 5 4 3 22 22 C 1.38169 * 119.93952 * 179.72676 * 4 3 2 23 23 C 1.38240 * 120.05948 * 0.23074 * 22 4 3 24 24 C 1.38297 * 120.10954 * 0.02562 * 23 22 4 25 25 C 1.38118 * 120.05471 * 0.02562 * 24 23 22 26 26 H 1.09000 * 109.47654 * 300.00082 * 1 2 3 27 27 H 1.09006 * 109.47087 * 59.99842 * 1 2 3 28 28 H 1.08997 * 109.46982 * 179.97438 * 1 2 3 29 29 H 1.08998 * 113.61879 * 25.52144 * 7 5 4 30 30 H 1.08997 * 113.69304 * 254.62230 * 7 5 4 31 31 H 0.97002 * 120.00490 * 335.00104 * 10 8 7 32 32 H 1.08000 * 126.45910 * 0.02562 * 14 13 11 33 33 H 1.09004 * 109.46794 * 304.99808 * 16 15 14 34 34 H 0.96701 * 114.00105 * 59.99927 * 17 16 15 35 35 H 1.48498 * 110.00303 * 58.67958 * 18 16 15 36 36 H 1.48506 * 109.99749 * 180.02562 * 18 16 15 37 37 H 1.07997 * 125.55683 * 180.02562 * 19 15 14 38 38 H 0.96994 * 125.66948 * 180.30598 * 20 19 15 39 39 H 1.08993 * 113.61229 * 105.46294 * 21 5 4 40 40 H 1.09000 * 113.61263 * 334.55944 * 21 5 4 41 41 H 1.08001 * 119.96754 * 180.25681 * 22 4 3 42 42 H 1.08000 * 119.94526 * 180.02562 * 23 22 4 43 43 H 1.07997 * 119.96969 * 179.97438 * 24 23 22 44 44 H 1.07999 * 120.02543 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2538 0.0222 0.0005 6 1 3.6598 -0.8699 0.1999 7 6 5.1757 -0.1123 -1.2228 8 6 6.2389 -0.6701 -0.2618 9 1 7.2475 -0.3149 -0.4729 10 7 6.1702 -2.1233 -0.0903 11 6 7.2692 -2.8112 0.2776 12 8 8.3188 -2.2251 0.4669 13 6 7.2007 -4.2663 0.4488 14 6 8.2397 -5.0931 0.8200 15 6 7.7334 -6.3960 0.8609 16 6 8.5081 -7.6380 1.2195 17 8 8.9226 -7.5632 2.5850 18 14 7.4260 -9.1354 0.9801 19 6 6.4230 -6.3435 0.5220 20 7 6.0854 -5.0542 0.2752 21 6 5.5298 0.1161 0.8536 22 6 4.0559 2.5172 -0.0052 23 6 3.3019 3.6758 -0.0066 24 6 1.9208 3.6048 -0.0018 25 6 1.2914 2.3753 0.0050 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 5.4498 0.8432 -1.6702 30 1 4.8266 -0.8386 -1.9567 31 1 5.3337 -2.5906 -0.2415 32 1 9.2533 -4.7913 1.0388 33 1 9.3853 -7.7171 0.5773 34 1 8.1921 -7.4908 3.2144 35 1 6.9623 -9.2071 -0.4288 36 1 8.1782 -10.3669 1.3311 37 1 5.7551 -7.1901 0.4631 38 1 5.2050 -4.7396 0.0170 39 1 5.4653 -0.4263 1.7968 40 1 5.9006 1.1340 0.9739 41 1 5.1344 2.5752 -0.0090 42 1 3.7922 4.6381 -0.0115 43 1 1.3339 4.5114 -0.0025 44 1 0.2128 2.3204 0.0092 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_10543058.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:16 Heat of formation + Delta-G solvation = -0.490984 kcal Electronic energy + Delta-G solvation = -27074.064532 eV Core-core repulsion = 23153.064287 eV Total energy + Delta-G solvation = -3921.000246 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.49813 -41.69172 -40.56938 -39.15225 -38.07302 -37.59728 -34.68041 -32.60436 -31.89038 -31.11356 -30.58217 -28.32682 -26.83052 -26.76930 -26.02861 -24.25285 -23.10680 -22.57321 -21.23844 -20.82069 -20.31570 -19.82387 -19.11696 -17.56214 -17.44442 -17.13286 -16.77428 -16.76722 -16.66068 -16.34876 -15.81459 -15.62082 -15.44257 -15.22749 -15.19650 -14.74805 -14.64272 -14.34474 -14.25362 -14.04545 -13.88354 -13.55468 -13.46399 -13.18681 -13.10404 -12.87299 -12.36687 -12.21136 -12.13708 -11.93861 -11.80848 -11.73094 -11.21514 -11.10985 -10.32850 -10.17260 -9.93978 -9.80111 -9.29448 -9.10947 -5.03699 0.30894 0.42343 0.46380 1.36247 1.51254 1.67402 1.92977 2.01818 2.05267 2.25409 2.38606 2.72582 3.39970 3.60237 3.62541 3.64762 3.77493 3.83187 3.89443 3.92492 4.00559 4.04591 4.10511 4.13370 4.14793 4.36395 4.37225 4.39777 4.48344 4.59772 4.64437 4.68831 4.69610 4.78759 4.86696 4.92863 4.96701 5.03354 5.07673 5.10547 5.35653 5.41261 5.54249 5.59684 5.63054 5.78119 5.81293 6.21537 6.36893 6.43759 6.73533 7.15018 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.104 4.104 5 C -0.063 4.063 6 H 0.100 0.900 7 C -0.136 4.136 8 C 0.121 3.879 9 H 0.108 0.892 10 N -0.714 5.714 11 C 0.593 3.407 12 O -0.522 6.522 13 C -0.058 4.058 14 C -0.075 4.075 15 C -0.211 4.211 16 C -0.033 4.033 17 O -0.542 6.542 18 Si 0.686 3.314 19 C 0.035 3.965 20 N -0.535 5.535 21 C -0.144 4.144 22 C -0.080 4.080 23 C -0.153 4.153 24 C -0.083 4.083 25 C -0.207 4.207 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.100 0.900 29 H 0.099 0.901 30 H 0.075 0.925 31 H 0.395 0.605 32 H 0.150 0.850 33 H 0.111 0.889 34 H 0.377 0.623 35 H -0.257 1.257 36 H -0.256 1.256 37 H 0.176 0.824 38 H 0.418 0.582 39 H 0.074 0.926 40 H 0.096 0.904 41 H 0.130 0.870 42 H 0.125 0.875 43 H 0.125 0.875 44 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.447 -0.003 -0.444 8.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.081 4.081 6 H 0.118 0.882 7 C -0.174 4.174 8 C 0.016 3.984 9 H 0.126 0.874 10 N -0.365 5.365 11 C 0.381 3.619 12 O -0.397 6.397 13 C -0.170 4.170 14 C -0.101 4.101 15 C -0.218 4.218 16 C -0.145 4.145 17 O -0.347 6.347 18 Si 0.588 3.412 19 C -0.101 4.101 20 N -0.131 5.131 21 C -0.183 4.183 22 C -0.098 4.098 23 C -0.172 4.172 24 C -0.101 4.101 25 C -0.225 4.225 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.119 0.881 29 H 0.117 0.883 30 H 0.093 0.907 31 H 0.229 0.771 32 H 0.168 0.832 33 H 0.129 0.871 34 H 0.224 0.776 35 H -0.182 1.182 36 H -0.181 1.181 37 H 0.193 0.807 38 H 0.256 0.744 39 H 0.093 0.907 40 H 0.115 0.885 41 H 0.148 0.852 42 H 0.143 0.857 43 H 0.143 0.857 44 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -7.245 -0.469 -1.059 7.337 hybrid contribution -0.959 0.565 -0.474 1.210 sum -8.205 0.096 -1.533 8.347 Atomic orbital electron populations 1.23079 0.78206 1.04094 1.01477 1.86032 1.21422 1.26852 1.88679 1.18854 0.91791 0.84253 0.96694 1.19022 0.90094 0.95336 1.05970 1.21392 0.93998 0.95828 0.96892 0.88171 1.23444 0.95289 1.02265 0.96356 1.21862 1.00672 0.79278 0.96626 0.87364 1.45539 1.12264 1.07754 1.70959 1.17040 0.83742 0.84623 0.76523 1.90880 1.29247 1.69127 1.50464 1.20395 0.88496 0.90917 1.17229 1.21228 0.98483 0.90942 0.99454 1.19898 0.94095 0.96202 1.11634 1.24371 1.03017 1.01328 0.85762 1.86506 1.36849 1.96681 1.14671 0.95201 0.85289 0.76844 0.83857 1.21866 0.96702 0.86564 1.04996 1.41931 1.10881 1.06874 1.53449 1.23590 0.95095 1.01426 0.98163 1.20888 1.00090 0.91007 0.97789 1.21094 0.93934 0.98547 1.03579 1.20987 0.94797 0.97062 0.97276 1.21263 1.00122 0.92428 1.08728 0.92567 0.92578 0.88125 0.88276 0.90669 0.77149 0.83199 0.87135 0.77589 1.18229 1.18084 0.80705 0.74437 0.90706 0.88547 0.85178 0.85705 0.85729 0.85462 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.21 9.43 -19.44 -0.18 -0.39 16 3 C 0.13 0.17 6.66 -39.22 -0.26 -0.10 16 4 C -0.10 -0.07 5.30 -104.47 -0.55 -0.63 16 5 C -0.06 0.04 3.74 -90.96 -0.34 -0.30 16 6 H 0.10 -0.06 7.33 -51.93 -0.38 -0.44 16 7 C -0.14 0.19 7.29 -25.92 -0.19 0.00 16 8 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 9 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 10 N -0.71 0.38 5.26 -54.32 -0.29 0.09 16 11 C 0.59 1.59 7.79 -12.86 -0.10 1.49 16 12 O -0.52 -3.54 16.48 5.19 0.09 -3.45 16 13 C -0.06 -0.08 7.06 -81.98 -0.58 -0.66 16 14 C -0.07 -0.19 10.59 -39.12 -0.41 -0.60 16 15 C -0.21 -0.08 5.43 -105.01 -0.57 -0.65 16 16 C -0.03 -0.01 3.02 36.01 0.11 0.10 16 17 O -0.54 -0.58 12.88 -35.23 -0.45 -1.03 16 18 Si 0.69 -1.09 30.60 -169.99 -5.20 -6.29 16 19 C 0.04 -0.07 10.45 -16.91 -0.18 -0.25 16 20 N -0.54 1.19 5.99 -9.39 -0.06 1.13 16 21 C -0.14 0.07 7.26 -25.92 -0.19 -0.12 16 22 C -0.08 -0.01 8.61 -39.61 -0.34 -0.35 16 23 C -0.15 -0.02 10.04 -39.56 -0.40 -0.41 16 24 C -0.08 -0.02 10.04 -39.60 -0.40 -0.42 16 25 C -0.21 -0.11 9.04 -39.43 -0.36 -0.47 16 26 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 27 H 0.06 -0.16 7.67 -51.93 -0.40 -0.56 16 28 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 29 H 0.10 -0.16 7.72 -51.93 -0.40 -0.56 16 30 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.39 -1.29 7.83 -40.82 -0.32 -1.61 16 32 H 0.15 0.54 8.06 -52.49 -0.42 0.11 16 33 H 0.11 0.12 7.96 -51.93 -0.41 -0.30 16 34 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 35 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 36 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 37 H 0.18 -0.92 6.21 -52.49 -0.33 -1.25 16 38 H 0.42 -2.29 8.19 -40.82 -0.33 -2.62 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.10 -0.10 6.32 -51.93 -0.33 -0.43 16 41 H 0.13 -0.21 6.67 -52.49 -0.35 -0.56 16 42 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 43 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 44 H 0.13 -0.15 6.30 -52.49 -0.33 -0.48 16 LS Contribution 365.93 15.07 5.51 5.51 Total: 0.00 -9.90 365.93 -10.34 -20.24 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -5.70 Total: -13.07 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -4.05 Total: -2.73 kcal Atomic # 7 Polarization: 1.57 SS G_CDS: -0.34 Total: 1.22 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.55 Total: -4.88 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.20 Total: -6.29 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -9.90 -10.34 -20.24 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_10543058.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.746 kcal (2) G-P(sol) polarization free energy of solvation -9.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.237 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.491 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds