Wall clock time and date at job start Sun Mar 7 2021 05:05:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 117.00196 * 2 1 4 4 C 1.38711 * 120.06074 * 180.02562 * 3 2 1 5 5 C 1.50703 * 120.02484 * 359.94929 * 4 3 2 6 6 H 1.09001 * 112.85044 * 348.80589 * 5 4 3 7 7 C 1.53779 * 113.61224 * 120.00029 * 5 4 3 8 8 C 1.53784 * 87.08011 * 139.98495 * 7 5 4 9 9 H 1.09007 * 113.61079 * 219.93801 * 8 7 5 10 10 N 1.46498 * 113.61709 * 89.11539 * 8 7 5 11 11 C 1.34775 * 119.99878 * 154.72477 * 10 8 7 12 12 O 1.21695 * 120.00222 * 355.23316 * 11 10 8 13 13 C 1.46677 * 120.00244 * 175.23093 * 11 10 8 14 14 C 1.37870 * 126.22897 * 4.96627 * 13 11 10 15 15 C 1.39832 * 107.08711 * 179.97438 * 14 13 11 16 16 C 1.35452 * 107.86336 * 359.97438 * 15 14 13 17 17 C 1.50700 * 125.56715 * 180.02562 * 16 15 14 18 18 O 1.42896 * 109.47539 * 149.97792 * 17 16 15 19 19 Si 1.86303 * 109.47101 * 29.97628 * 17 16 15 20 20 N 1.35538 * 108.87016 * 359.77219 * 16 15 14 21 21 C 1.46500 * 125.67535 * 180.26513 * 20 16 15 22 22 C 1.53775 * 113.61595 * 217.49953 * 5 4 3 23 23 C 1.38162 * 119.94653 * 180.22546 * 4 3 2 24 24 C 1.38241 * 120.05306 * 359.52028 * 23 4 3 25 25 C 1.38287 * 120.11587 * 0.45663 * 24 23 4 26 26 C 1.38125 * 120.05210 * 359.79089 * 25 24 23 27 27 H 1.09005 * 109.46724 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47285 * 300.00247 * 1 2 3 29 29 H 1.08998 * 109.47001 * 60.00476 * 1 2 3 30 30 H 1.08997 * 113.61873 * 25.43579 * 7 5 4 31 31 H 1.09002 * 113.69571 * 254.53988 * 7 5 4 32 32 H 0.97000 * 119.99733 * 335.00350 * 10 8 7 33 33 H 1.08000 * 126.45976 * 359.91878 * 14 13 11 34 34 H 1.08002 * 126.07398 * 179.97438 * 15 14 13 35 35 H 1.09000 * 109.47286 * 269.97586 * 17 16 15 36 36 H 0.96708 * 114.00236 * 300.00400 * 18 17 16 37 37 H 1.48494 * 110.00067 * 179.97438 * 19 17 16 38 38 H 1.48499 * 110.00127 * 301.32078 * 19 17 16 39 39 H 1.09001 * 109.47322 * 275.92612 * 21 20 16 40 40 H 1.08995 * 109.47495 * 35.93225 * 21 20 16 41 41 H 1.09005 * 109.47079 * 155.92924 * 21 20 16 42 42 H 1.09001 * 113.61732 * 105.47322 * 22 5 4 43 43 H 1.09002 * 113.61391 * 334.56739 * 22 5 4 44 44 H 1.07998 * 119.97137 * 179.74162 * 23 4 3 45 45 H 1.08010 * 119.94319 * 180.20971 * 24 23 4 46 46 H 1.07993 * 119.97352 * 179.77605 * 25 24 23 47 47 H 1.08001 * 120.02950 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2849 -0.0005 5 6 4.2538 0.0222 0.0000 6 1 3.6593 -0.8702 0.1959 7 6 5.1799 -0.1102 -1.2205 8 6 6.2406 -0.6676 -0.2565 9 1 7.2498 -0.3122 -0.4649 10 7 6.1730 -2.1211 -0.0864 11 6 7.2731 -2.8087 0.2790 12 8 8.3418 -2.2361 0.3834 13 6 7.1823 -4.2471 0.5511 14 6 6.0669 -5.0397 0.3815 15 6 6.4243 -6.3380 0.7582 16 6 7.7231 -6.3165 1.1422 17 6 8.5141 -7.5049 1.6252 18 8 9.8908 -7.3314 1.2838 19 14 7.8643 -9.0530 0.8178 20 7 8.1967 -5.0529 1.0160 21 6 9.5606 -4.6168 1.3257 22 6 5.5270 0.1168 0.8572 23 6 4.0560 2.5171 0.0042 24 6 3.3019 3.6757 -0.0006 25 6 1.9209 3.6048 -0.0006 26 6 1.2914 2.3753 -0.0001 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 5.4544 0.8459 -1.6661 31 1 4.8340 -0.8363 -1.9562 32 1 5.3375 -2.5892 -0.2407 33 1 5.0992 -4.7182 0.0256 34 1 5.7794 -7.2042 0.7452 35 1 8.4162 -7.5909 2.7074 36 1 10.0530 -7.2475 0.3341 37 1 8.6365 -10.2321 1.2854 38 1 6.4251 -9.2278 1.1392 39 1 9.6412 -4.4056 2.3920 40 1 10.2639 -5.4049 1.0572 41 1 9.7914 -3.7151 0.7583 42 1 5.4601 -0.4265 1.7998 43 1 5.8963 1.1350 0.9796 44 1 5.1344 2.5752 0.0080 45 1 3.7923 4.6381 -0.0003 46 1 1.3340 4.5113 -0.0006 47 1 0.2128 2.3203 0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_10803936.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:23 Heat of formation + Delta-G solvation = 6.969005 kcal Electronic energy + Delta-G solvation = -29449.860843 eV Core-core repulsion = 25373.646468 eV Total energy + Delta-G solvation = -4076.214375 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.56527 -41.65043 -40.53366 -39.12313 -38.04175 -37.80753 -34.79874 -33.59590 -32.08249 -31.07574 -31.04333 -28.27775 -27.49484 -27.07681 -26.70467 -25.78116 -23.51995 -22.98697 -22.52449 -21.52041 -20.52561 -20.01720 -19.12378 -18.75874 -18.08269 -17.40796 -17.01591 -16.85520 -16.69631 -16.64727 -16.17908 -15.95930 -15.54311 -15.41064 -15.36142 -15.01842 -14.92840 -14.78758 -14.46323 -14.35874 -14.28028 -14.00911 -13.67631 -13.49961 -13.19364 -13.06432 -13.04661 -12.96741 -12.79954 -12.31694 -12.17851 -12.07844 -12.00480 -11.73631 -11.65617 -11.15508 -10.99352 -10.64136 -10.06871 -9.75080 -9.69841 -9.06407 -9.04588 -5.03932 0.35727 0.45171 0.51291 1.12041 1.50446 1.69449 1.72916 1.98725 2.31856 2.39761 2.43858 2.77548 3.16944 3.47098 3.55219 3.66757 3.68471 3.81425 3.88836 3.98390 4.04531 4.06632 4.15562 4.19590 4.21095 4.34185 4.38681 4.42471 4.45116 4.46616 4.54681 4.56646 4.65769 4.69656 4.74715 4.82890 4.89423 4.95496 5.02613 5.02833 5.08478 5.15591 5.20961 5.40995 5.48954 5.59613 5.66367 5.75194 5.83220 6.01761 6.17934 6.33332 6.43016 6.52117 7.23088 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.103 0.897 7 C -0.135 4.135 8 C 0.122 3.878 9 H 0.107 0.893 10 N -0.701 5.701 11 C 0.595 3.405 12 O -0.545 6.545 13 C -0.052 4.052 14 C -0.134 4.134 15 C -0.205 4.205 16 C 0.014 3.986 17 C -0.050 4.050 18 O -0.542 6.542 19 Si 0.724 3.276 20 N -0.389 5.389 21 C 0.050 3.950 22 C -0.145 4.145 23 C -0.080 4.080 24 C -0.154 4.154 25 C -0.084 4.084 26 C -0.207 4.207 27 H 0.101 0.899 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.098 0.902 31 H 0.077 0.923 32 H 0.404 0.596 33 H 0.146 0.854 34 H 0.147 0.853 35 H 0.119 0.881 36 H 0.381 0.619 37 H -0.253 1.253 38 H -0.252 1.252 39 H 0.071 0.929 40 H 0.103 0.897 41 H 0.105 0.895 42 H 0.074 0.926 43 H 0.095 0.905 44 H 0.130 0.870 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.466 -0.320 -2.929 4.549 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.228 6.228 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.081 4.081 6 H 0.121 0.879 7 C -0.173 4.173 8 C 0.017 3.983 9 H 0.125 0.875 10 N -0.352 5.352 11 C 0.383 3.617 12 O -0.424 6.424 13 C -0.166 4.166 14 C -0.161 4.161 15 C -0.229 4.229 16 C -0.104 4.104 17 C -0.160 4.160 18 O -0.348 6.348 19 Si 0.623 3.377 20 N -0.061 5.061 21 C -0.090 4.090 22 C -0.184 4.184 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.102 4.102 26 C -0.226 4.226 27 H 0.119 0.881 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.116 0.884 31 H 0.096 0.904 32 H 0.240 0.760 33 H 0.164 0.836 34 H 0.164 0.836 35 H 0.136 0.864 36 H 0.229 0.771 37 H -0.178 1.178 38 H -0.176 1.176 39 H 0.090 0.910 40 H 0.122 0.878 41 H 0.123 0.877 42 H 0.092 0.908 43 H 0.114 0.886 44 H 0.148 0.852 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.533 -0.776 -1.985 3.310 hybrid contribution -0.945 0.595 0.569 1.253 sum -3.478 -0.180 -1.416 3.760 Atomic orbital electron populations 1.23081 0.78221 1.04138 1.01408 1.86047 1.21404 1.26775 1.88611 1.18862 0.91812 0.84277 0.96574 1.19037 0.90121 0.95358 1.05844 1.21406 0.93983 0.95894 0.96855 0.87916 1.23436 0.95224 1.02225 0.96423 1.21852 1.00600 0.79229 0.96644 0.87471 1.45274 1.12494 1.07302 1.70093 1.16956 0.83877 0.84628 0.76222 1.90781 1.27798 1.70703 1.53146 1.20005 0.89956 0.91908 1.14737 1.21283 0.97204 0.93064 1.04519 1.20637 0.94523 0.98580 1.09117 1.21073 0.95574 0.86161 1.07590 1.24986 0.84072 1.02365 1.04543 1.86490 1.22966 1.95472 1.29840 0.93995 0.79513 0.73938 0.90244 1.43761 1.10133 1.06068 1.46158 1.22656 0.79558 1.03813 1.03007 1.23601 0.95277 1.01296 0.98200 1.20880 1.00051 0.91016 0.97865 1.21082 0.93937 0.98513 1.03707 1.20975 0.94787 0.97042 0.97367 1.21266 1.00117 0.92432 1.08763 0.88076 0.92622 0.92591 0.88359 0.90442 0.76018 0.83646 0.83562 0.86371 0.77089 1.17769 1.17609 0.90993 0.87848 0.87681 0.90755 0.88639 0.85221 0.85769 0.85779 0.85476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.43 9.43 -19.42 -0.18 -0.61 16 3 C 0.13 0.23 6.66 -39.22 -0.26 -0.03 16 4 C -0.10 -0.12 5.30 -104.47 -0.55 -0.68 16 5 C -0.06 0.01 3.75 -90.96 -0.34 -0.33 16 6 H 0.10 0.03 7.33 -51.93 -0.38 -0.35 16 7 C -0.14 0.13 7.29 -25.92 -0.19 -0.06 16 8 C 0.12 0.02 4.36 -67.12 -0.29 -0.27 16 9 H 0.11 0.16 7.41 -51.93 -0.38 -0.23 16 10 N -0.70 -0.28 5.25 -54.32 -0.29 -0.56 16 11 C 0.59 1.88 7.77 -12.85 -0.10 1.78 16 12 O -0.55 -3.29 14.12 5.19 0.07 -3.22 16 13 C -0.05 -0.13 6.89 -81.99 -0.56 -0.70 16 14 C -0.13 -0.11 10.35 -39.12 -0.41 -0.51 16 15 C -0.20 -0.15 9.37 -39.98 -0.37 -0.53 16 16 C 0.01 0.01 6.15 -81.95 -0.50 -0.49 16 17 C -0.05 0.03 2.99 36.01 0.11 0.13 16 18 O -0.54 0.38 10.11 -35.23 -0.36 0.03 16 19 Si 0.72 -1.28 31.29 -169.99 -5.32 -6.60 16 20 N -0.39 -0.88 3.16 -115.62 -0.37 -1.24 16 21 C 0.05 0.07 10.30 59.85 0.62 0.69 16 22 C -0.15 0.01 7.25 -25.92 -0.19 -0.18 16 23 C -0.08 -0.03 8.62 -39.61 -0.34 -0.38 16 24 C -0.15 -0.07 10.04 -39.56 -0.40 -0.46 16 25 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 26 C -0.21 -0.20 9.04 -39.43 -0.36 -0.56 16 27 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 28 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 29 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 30 H 0.10 -0.13 7.73 -51.93 -0.40 -0.54 16 31 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.40 -0.67 7.60 -40.82 -0.31 -0.98 16 33 H 0.15 -0.27 7.45 -52.49 -0.39 -0.66 16 34 H 0.15 -0.09 6.62 -52.49 -0.35 -0.44 16 35 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 36 H 0.38 -1.57 8.29 45.56 0.38 -1.19 16 37 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 38 H -0.25 -0.05 6.76 56.52 0.38 0.33 16 39 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 40 H 0.10 -0.04 5.24 -51.93 -0.27 -0.31 16 41 H 0.10 0.29 5.92 -51.93 -0.31 -0.02 16 42 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 43 H 0.10 -0.07 6.30 -51.93 -0.33 -0.39 16 44 H 0.13 -0.17 6.64 -52.49 -0.35 -0.52 16 45 H 0.12 -0.15 8.06 -52.48 -0.42 -0.58 16 46 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 47 H 0.13 -0.09 6.30 -52.49 -0.33 -0.42 16 LS Contribution 378.03 15.07 5.70 5.70 Total: 0.00 -8.06 378.03 -10.68 -18.74 By element: Atomic # 1 Polarization: -3.77 SS G_CDS: -6.39 Total: -10.16 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -3.55 Total: -2.07 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: -0.65 Total: -1.80 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.47 Total: -3.80 kcal Atomic # 14 Polarization: -1.28 SS G_CDS: -5.32 Total: -6.60 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.06 -10.68 -18.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_10803936.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.705 kcal (2) G-P(sol) polarization free energy of solvation -8.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.736 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds