Wall clock time and date at job start Sun Mar 7 2021 05:05:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35903 * 117.00100 * 2 1 4 4 C 1.38710 * 120.05781 * 180.02562 * 3 2 1 5 5 C 1.50701 * 120.02673 * 0.02562 * 4 3 2 6 6 H 1.09002 * 112.85047 * 350.05644 * 5 4 3 7 7 C 1.53781 * 113.61772 * 121.25358 * 5 4 3 8 8 C 1.53777 * 87.08336 * 140.06093 * 7 5 4 9 9 H 1.08998 * 113.61354 * 219.93545 * 8 7 5 10 10 N 1.46500 * 113.61088 * 89.11940 * 8 7 5 11 11 C 1.34772 * 120.00149 * 155.00452 * 10 8 7 12 12 O 1.21726 * 120.00161 * 359.97438 * 11 10 8 13 13 C 1.46570 * 120.00228 * 179.97438 * 11 10 8 14 14 C 1.40853 * 126.57942 * 179.97438 * 13 11 10 15 15 C 1.40088 * 132.86791 * 0.02562 * 14 13 11 16 16 C 1.36450 * 119.25476 * 180.02562 * 15 14 13 17 17 C 1.50709 * 120.29391 * 180.02562 * 16 15 14 18 18 O 1.42896 * 109.46978 * 119.95361 * 17 16 15 19 19 Si 1.86301 * 109.46661 * 239.95299 * 17 16 15 20 20 C 1.40152 * 119.41213 * 359.95579 * 16 15 14 21 21 C 1.35193 * 120.31740 * 0.04188 * 20 16 15 22 22 N 1.36244 * 120.70396 * 359.97438 * 21 20 16 23 23 N 1.40014 * 132.01208 * 179.97438 * 22 21 20 24 24 C 1.30738 * 109.60674 * 179.71763 * 23 22 21 25 25 C 1.53775 * 87.07992 * 334.56762 * 8 7 5 26 26 C 1.38166 * 119.94488 * 179.71896 * 4 3 2 27 27 C 1.38240 * 120.05340 * 0.23660 * 26 4 3 28 28 C 1.38283 * 120.11554 * 0.02562 * 27 26 4 29 29 C 1.38127 * 120.05451 * 0.02562 * 28 27 26 30 30 H 1.09002 * 109.47564 * 60.00344 * 1 2 3 31 31 H 1.08999 * 109.47226 * 180.02562 * 1 2 3 32 32 H 1.09005 * 109.47153 * 299.99982 * 1 2 3 33 33 H 1.08997 * 113.61673 * 254.61641 * 7 5 4 34 34 H 1.09005 * 113.61396 * 25.51470 * 7 5 4 35 35 H 0.96999 * 119.99703 * 334.99353 * 10 8 7 36 36 H 1.08002 * 120.37645 * 359.97438 * 15 14 13 37 37 H 1.08997 * 109.47060 * 359.94916 * 17 16 15 38 38 H 0.96700 * 114.00571 * 60.00207 * 18 17 16 39 39 H 1.48500 * 110.00014 * 179.97438 * 19 17 16 40 40 H 1.48507 * 110.00079 * 301.31798 * 19 17 16 41 41 H 1.07998 * 119.84602 * 180.02562 * 20 16 15 42 42 H 1.07999 * 119.64710 * 179.97438 * 21 20 16 43 43 H 1.07998 * 125.63099 * 180.26989 * 24 23 22 44 44 H 1.08993 * 113.61636 * 270.87622 * 25 8 7 45 45 H 1.09008 * 113.61006 * 139.97865 * 25 8 7 46 46 H 1.08002 * 119.97223 * 180.25221 * 26 4 3 47 47 H 1.08000 * 119.94533 * 180.02562 * 27 26 4 48 48 H 1.07999 * 119.97537 * 180.02562 * 28 27 26 49 49 H 1.08003 * 120.02919 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2849 -0.0005 5 6 4.2537 0.0222 -0.0017 6 1 3.6558 -0.8727 0.1714 7 6 5.2020 -0.0942 -1.2067 8 6 6.2442 -0.6664 -0.2314 9 1 7.2573 -0.3094 -0.4162 10 7 6.1720 -2.1221 -0.0832 11 6 7.2630 -2.8155 0.2981 12 8 8.3084 -2.2324 0.5189 13 6 7.1907 -4.2718 0.4470 14 6 8.2389 -5.1290 0.8349 15 6 9.5781 -4.9022 1.1778 16 6 10.3680 -5.9617 1.5174 17 6 11.8119 -5.7445 1.8909 18 8 12.0341 -6.2090 3.2239 19 14 12.9061 -6.6872 0.7142 20 6 9.8245 -7.2535 1.5173 21 6 8.5292 -7.4488 1.1828 22 7 7.7326 -6.3974 0.8420 23 7 6.3868 -6.3259 0.4624 24 6 6.0606 -5.0803 0.2354 25 6 5.5111 0.1031 0.8799 26 6 4.0559 2.5171 -0.0064 27 6 3.3018 3.6758 -0.0068 28 6 1.9208 3.6048 -0.0008 29 6 1.2914 2.3753 0.0062 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3634 0.5139 0.8900 33 1 4.8677 -0.8098 -1.9579 34 1 5.4855 0.8678 -1.6337 35 1 5.3390 -2.5868 -0.2593 36 1 9.9810 -3.9002 1.1727 37 1 12.0463 -4.6816 1.8327 38 1 11.8452 -7.1491 3.3495 39 1 14.3327 -6.4808 1.0713 40 1 12.5746 -8.1340 0.7607 41 1 10.4433 -8.0971 1.7853 42 1 8.1216 -8.4490 1.1859 43 1 5.0849 -4.7308 -0.0683 44 1 5.8791 1.1190 1.0235 45 1 5.4263 -0.4533 1.8134 46 1 5.1344 2.5752 -0.0109 47 1 3.7921 4.6381 -0.0118 48 1 1.3339 4.5114 -0.0015 49 1 0.2128 2.3203 0.0113 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_11618758.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:27 Heat of formation + Delta-G solvation = 61.125063 kcal Electronic energy + Delta-G solvation = -33515.424978 eV Core-core repulsion = 28991.454653 eV Total energy + Delta-G solvation = -4523.970325 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -43.28524 -41.64007 -40.55969 -39.50266 -38.97399 -37.97291 -37.32668 -34.43501 -34.14004 -32.11065 -31.87079 -31.03462 -30.20822 -28.24282 -27.37180 -26.62908 -26.12271 -24.99080 -23.88648 -23.15095 -22.97311 -22.42696 -21.26636 -20.01490 -19.22895 -18.93303 -18.62349 -17.95295 -17.54021 -17.28974 -16.95882 -16.80409 -16.67837 -16.57527 -16.48323 -15.90691 -15.56795 -15.50891 -15.35673 -15.34151 -14.98313 -14.80405 -14.60732 -14.24635 -14.20205 -13.96434 -13.83715 -13.53599 -13.42837 -13.25494 -13.07649 -13.02516 -12.77413 -12.47560 -12.27784 -12.08641 -12.05490 -11.90841 -11.67172 -11.61781 -11.52839 -11.08470 -10.89793 -10.71847 -10.35688 -9.93225 -9.71159 -9.02657 -8.74944 -5.05093 -0.54592 -0.14910 0.38833 0.53939 1.00526 1.08732 1.13194 1.48477 1.81169 2.07257 2.28134 2.34204 2.62553 2.80703 3.06636 3.15375 3.28655 3.43491 3.55000 3.63967 3.71452 3.80406 3.85853 3.91525 3.99541 4.04904 4.10324 4.13668 4.18629 4.21216 4.24351 4.26240 4.36611 4.45619 4.48658 4.51502 4.56434 4.70357 4.71961 4.77309 4.80264 4.95710 5.00243 5.08508 5.10140 5.12291 5.17388 5.24683 5.29721 5.44088 5.56026 5.64400 5.64945 5.76770 5.86224 6.22344 6.32646 6.45482 6.67757 7.45254 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.129 3.871 4 C -0.102 4.102 5 C -0.064 4.064 6 H 0.102 0.898 7 C -0.136 4.136 8 C 0.125 3.875 9 H 0.106 0.894 10 N -0.711 5.711 11 C 0.604 3.396 12 O -0.547 6.547 13 C -0.314 4.314 14 C 0.170 3.830 15 C -0.089 4.089 16 C -0.066 4.066 17 C -0.075 4.075 18 O -0.521 6.521 19 Si 0.696 3.304 20 C -0.162 4.162 21 C 0.123 3.877 22 N -0.267 5.267 23 N -0.313 5.313 24 C 0.121 3.879 25 C -0.145 4.145 26 C -0.080 4.080 27 C -0.154 4.154 28 C -0.084 4.084 29 C -0.207 4.207 30 H 0.055 0.945 31 H 0.101 0.899 32 H 0.055 0.945 33 H 0.076 0.924 34 H 0.097 0.903 35 H 0.399 0.601 36 H 0.166 0.834 37 H 0.127 0.873 38 H 0.375 0.625 39 H -0.247 1.247 40 H -0.253 1.253 41 H 0.156 0.844 42 H 0.177 0.823 43 H 0.199 0.801 44 H 0.094 0.906 45 H 0.073 0.927 46 H 0.130 0.870 47 H 0.124 0.876 48 H 0.124 0.876 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.225 -1.140 -2.490 3.529 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.103 4.103 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.174 4.174 8 C 0.019 3.981 9 H 0.124 0.876 10 N -0.361 5.361 11 C 0.393 3.607 12 O -0.426 6.426 13 C -0.329 4.329 14 C 0.049 3.951 15 C -0.109 4.109 16 C -0.072 4.072 17 C -0.184 4.184 18 O -0.327 6.327 19 Si 0.594 3.406 20 C -0.184 4.184 21 C -0.003 4.003 22 N -0.031 5.031 23 N -0.133 5.133 24 C -0.061 4.061 25 C -0.184 4.184 26 C -0.098 4.098 27 C -0.172 4.172 28 C -0.102 4.102 29 C -0.226 4.226 30 H 0.074 0.926 31 H 0.119 0.881 32 H 0.074 0.926 33 H 0.094 0.906 34 H 0.115 0.885 35 H 0.233 0.767 36 H 0.183 0.817 37 H 0.144 0.856 38 H 0.223 0.777 39 H -0.171 1.171 40 H -0.177 1.177 41 H 0.174 0.826 42 H 0.194 0.806 43 H 0.215 0.785 44 H 0.112 0.888 45 H 0.092 0.908 46 H 0.148 0.852 47 H 0.142 0.858 48 H 0.142 0.858 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.190 -2.144 -2.349 3.395 hybrid contribution -1.188 0.169 0.906 1.504 sum -2.378 -1.975 -1.442 3.411 Atomic orbital electron populations 1.23075 0.78264 1.04107 1.01399 1.86043 1.21368 1.26812 1.88642 1.18864 0.91831 0.84243 0.96649 1.19055 0.90098 0.95417 1.05684 1.21410 0.94021 0.95783 0.97008 0.88017 1.23445 0.95398 1.02136 0.96445 1.21786 1.00392 0.79624 0.96277 0.87575 1.45362 1.13237 1.06954 1.70587 1.16802 0.83270 0.84850 0.75733 1.90784 1.29571 1.70779 1.51462 1.19611 0.93639 0.94122 1.25529 1.19286 0.94163 0.84688 0.96994 1.20703 0.89417 1.01213 0.99544 1.20411 0.97230 0.92849 0.96735 1.25079 0.95121 1.07392 0.90831 1.86707 1.89753 1.30089 1.26201 0.94400 0.78949 0.79825 0.87410 1.20700 0.94229 0.98189 1.05251 1.21512 0.89653 0.92003 0.97131 1.46078 1.09153 1.05799 1.42058 1.77642 0.88377 1.20452 1.26869 1.24077 0.98989 0.89540 0.93449 1.23587 0.95228 1.01371 0.98167 1.20881 1.00071 0.91004 0.97827 1.21079 0.93927 0.98523 1.03705 1.20969 0.94794 0.97021 0.97445 1.21262 1.00092 0.92451 1.08801 0.92603 0.88105 0.92640 0.90572 0.88477 0.76681 0.81702 0.85560 0.77725 1.17133 1.17695 0.82625 0.80591 0.78483 0.88806 0.90787 0.85194 0.85783 0.85812 0.85519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.46 9.42 -19.44 -0.18 -0.64 16 3 C 0.13 0.25 6.66 -39.22 -0.26 -0.01 16 4 C -0.10 -0.13 5.30 -104.47 -0.55 -0.69 16 5 C -0.06 0.00 3.75 -90.96 -0.34 -0.34 16 6 H 0.10 0.03 7.31 -51.93 -0.38 -0.35 16 7 C -0.14 0.13 7.29 -25.92 -0.19 -0.06 16 8 C 0.12 0.03 4.32 -67.12 -0.29 -0.26 16 9 H 0.11 0.17 7.46 -51.93 -0.39 -0.22 16 10 N -0.71 -0.21 5.25 -54.36 -0.29 -0.50 16 11 C 0.60 1.91 7.78 -12.90 -0.10 1.81 16 12 O -0.55 -3.39 15.30 5.17 0.08 -3.31 16 13 C -0.31 -0.80 6.17 -104.68 -0.65 -1.45 16 14 C 0.17 0.48 6.76 -84.07 -0.57 -0.09 16 15 C -0.09 -0.13 9.35 -39.53 -0.37 -0.50 16 16 C -0.07 0.04 4.53 -104.54 -0.47 -0.44 16 17 C -0.08 0.09 2.84 36.01 0.10 0.19 16 18 O -0.52 -0.05 12.87 -35.23 -0.45 -0.50 16 19 Si 0.70 -1.49 31.97 -169.99 -5.43 -6.93 16 20 C -0.16 0.32 8.38 -39.95 -0.33 -0.02 16 21 C 0.12 -0.10 11.18 -16.68 -0.19 -0.29 16 22 N -0.27 -0.56 3.86 -10.55 -0.04 -0.60 16 23 N -0.31 -0.85 12.57 30.75 0.39 -0.46 16 24 C 0.12 0.11 11.44 -17.15 -0.20 -0.09 16 25 C -0.14 -0.02 7.26 -25.92 -0.19 -0.21 16 26 C -0.08 -0.04 8.54 -39.61 -0.34 -0.38 16 27 C -0.15 -0.08 10.04 -39.56 -0.40 -0.48 16 28 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 29 C -0.21 -0.23 9.04 -39.43 -0.36 -0.59 16 30 H 0.06 -0.12 7.68 -51.93 -0.40 -0.52 16 31 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.05 -0.11 7.65 -51.93 -0.40 -0.51 16 33 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.10 -0.12 7.64 -51.93 -0.40 -0.52 16 35 H 0.40 -0.83 7.62 -40.82 -0.31 -1.14 16 36 H 0.17 0.29 7.01 -52.49 -0.37 -0.08 16 37 H 0.13 -0.20 7.71 -51.93 -0.40 -0.60 16 38 H 0.37 -1.32 8.08 45.56 0.37 -0.95 16 39 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 40 H -0.25 0.28 7.05 56.52 0.40 0.67 16 41 H 0.16 -0.74 7.26 -52.49 -0.38 -1.12 16 42 H 0.18 -0.63 8.06 -52.49 -0.42 -1.05 16 43 H 0.20 -0.63 7.46 -52.49 -0.39 -1.02 16 44 H 0.09 -0.04 6.40 -51.93 -0.33 -0.37 16 45 H 0.07 0.09 8.14 -51.92 -0.42 -0.33 16 46 H 0.13 -0.15 6.73 -52.49 -0.35 -0.50 16 47 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 48 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 49 H 0.13 -0.08 6.30 -52.48 -0.33 -0.41 16 LS Contribution 406.80 15.07 6.13 6.13 Total: 0.00 -10.39 406.80 -11.09 -21.48 By element: Atomic # 1 Polarization: -5.08 SS G_CDS: -6.20 Total: -11.28 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.09 Total: -3.40 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: 0.06 Total: -1.56 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.56 Total: -4.45 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.43 Total: -6.93 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.39 -11.09 -21.48 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_11618758.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.606 kcal (2) G-P(sol) polarization free energy of solvation -10.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.481 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds