Wall clock time and date at job start Sun Mar 7 2021 05:05:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35894 * 117.00071 * 2 1 4 4 C 1.38705 * 120.05826 * 180.02562 * 3 2 1 5 5 C 1.50706 * 120.02478 * 0.02562 * 4 3 2 6 6 H 1.08998 * 112.85166 * 348.52391 * 5 4 3 7 7 C 1.53780 * 113.61370 * 119.72675 * 5 4 3 8 8 C 1.53777 * 87.08203 * 140.06422 * 7 5 4 9 9 H 1.09001 * 113.61257 * 219.93444 * 8 7 5 10 10 N 1.46496 * 113.61861 * 89.11535 * 8 7 5 11 11 C 1.34777 * 120.00258 * 156.53091 * 10 8 7 12 12 O 1.21690 * 120.00222 * 359.97438 * 11 10 8 13 13 C 1.46676 * 119.99963 * 179.97438 * 11 10 8 14 14 C 1.37874 * 126.23351 * 180.02562 * 13 11 10 15 15 C 1.50695 * 126.45809 * 359.97213 * 14 13 11 16 16 C 1.39834 * 107.08673 * 180.02562 * 14 13 11 17 17 C 1.50700 * 126.06972 * 180.02562 * 16 14 13 18 18 O 1.42893 * 109.47225 * 29.99166 * 17 16 14 19 19 Si 1.86299 * 109.47314 * 149.99483 * 17 16 14 20 20 C 1.35453 * 107.86668 * 359.97438 * 16 14 13 21 21 C 1.50701 * 125.56879 * 180.02562 * 20 16 14 22 22 N 1.35539 * 108.87124 * 359.73869 * 20 16 14 23 23 C 1.53775 * 87.17460 * 334.52027 * 8 7 5 24 24 C 1.38169 * 119.94626 * 179.72205 * 4 3 2 25 25 C 1.38237 * 120.05570 * 0.27859 * 24 4 3 26 26 C 1.38285 * 120.11033 * 359.97438 * 25 24 4 27 27 C 1.38123 * 120.06071 * 0.02562 * 26 25 24 28 28 H 1.09002 * 109.46729 * 299.99815 * 1 2 3 29 29 H 1.08995 * 109.47126 * 59.99911 * 1 2 3 30 30 H 1.09000 * 109.47211 * 180.02562 * 1 2 3 31 31 H 1.08996 * 113.61741 * 25.50855 * 7 5 4 32 32 H 1.09004 * 113.68547 * 254.61946 * 7 5 4 33 33 H 0.96999 * 119.99694 * 336.52481 * 10 8 7 34 34 H 1.09001 * 109.46662 * 90.02887 * 15 14 13 35 35 H 1.08998 * 109.47546 * 210.02390 * 15 14 13 36 36 H 1.08998 * 109.47234 * 330.03335 * 15 14 13 37 37 H 1.09002 * 109.46896 * 269.99279 * 17 16 14 38 38 H 0.96702 * 113.99682 * 60.00117 * 18 17 16 39 39 H 1.48504 * 109.99909 * 179.97438 * 19 17 16 40 40 H 1.48502 * 109.99988 * 301.31564 * 19 17 16 41 41 H 1.08997 * 109.47237 * 90.00143 * 21 20 16 42 42 H 1.08996 * 109.47428 * 210.00691 * 21 20 16 43 43 H 1.09001 * 109.46660 * 330.00146 * 21 20 16 44 44 H 0.96993 * 125.68415 * 180.28600 * 22 20 16 45 45 H 1.08999 * 113.61562 * 140.02002 * 23 8 7 46 46 H 1.09003 * 113.61852 * 270.93148 * 23 8 7 47 47 H 1.07999 * 119.96912 * 180.25229 * 24 4 3 48 48 H 1.07998 * 119.94433 * 179.97438 * 25 24 4 49 49 H 1.08005 * 119.97043 * 179.97438 * 26 25 24 50 50 H 1.07993 * 120.03252 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.2537 0.0221 -0.0017 6 1 3.6601 -0.8700 0.1978 7 6 5.1748 -0.1119 -1.2258 8 6 6.2386 -0.6701 -0.2658 9 1 7.2474 -0.3160 -0.4784 10 7 6.1701 -2.1234 -0.0948 11 6 7.2615 -2.8075 0.3019 12 8 8.3041 -2.2180 0.5176 13 6 7.1927 -4.2625 0.4737 14 6 8.2244 -5.0858 0.8723 15 6 9.6296 -4.6602 1.2116 16 6 7.7213 -6.3902 0.9014 17 6 8.4903 -7.6294 1.2811 18 8 9.5047 -7.2891 2.2282 19 14 7.3281 -8.8744 2.0362 20 6 6.4199 -6.3421 0.5289 21 6 5.4939 -7.5264 0.4237 22 7 6.0847 -5.0542 0.2721 23 6 5.5328 0.1157 0.8518 24 6 4.0560 2.5171 -0.0063 25 6 3.3020 3.6757 -0.0058 26 6 1.9209 3.6047 0.0000 27 6 1.2914 2.3753 0.0058 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 5.4485 0.8437 -1.6730 32 1 4.8250 -0.8380 -1.9597 33 1 5.3392 -2.5934 -0.2670 34 1 9.6924 -4.4288 2.2749 35 1 10.3214 -5.4684 0.9742 36 1 9.8915 -3.7755 0.6312 37 1 8.9526 -8.0569 0.3914 38 1 9.1647 -6.9022 3.0467 39 1 8.0742 -10.1014 2.4144 40 1 6.6673 -8.2923 3.2320 41 1 4.9944 -7.6830 1.3798 42 1 4.7487 -7.3375 -0.3489 43 1 6.0690 -8.4152 0.1643 44 1 5.2104 -4.7424 -0.0093 45 1 5.4707 -0.4271 1.7950 46 1 5.9042 1.1335 0.9716 47 1 5.1344 2.5751 -0.0109 48 1 3.7923 4.6380 -0.0099 49 1 1.3340 4.5114 0.0009 50 1 0.2129 2.3203 0.0108 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_12297754.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:31 Heat of formation + Delta-G solvation = -9.419775 kcal Electronic energy + Delta-G solvation = -31652.756018 eV Core-core repulsion = 27420.293353 eV Total energy + Delta-G solvation = -4232.462665 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.65554 -41.69355 -40.57133 -39.14408 -38.06877 -37.75636 -34.72949 -33.62853 -33.06204 -31.81273 -31.11087 -29.27646 -28.35633 -27.58358 -26.76052 -26.51360 -25.72361 -23.33491 -22.81925 -22.34921 -20.77606 -20.44752 -19.98550 -19.41213 -19.04732 -17.54373 -17.47191 -16.99079 -16.78921 -16.75209 -16.60110 -16.45086 -15.86723 -15.71757 -15.43647 -15.25701 -15.15179 -14.92676 -14.62076 -14.41740 -14.24024 -14.10690 -14.02830 -13.87435 -13.57350 -13.52902 -13.22812 -13.15351 -13.13121 -13.09652 -12.86490 -12.45233 -12.36298 -12.24974 -12.13454 -11.79202 -11.74783 -11.71730 -11.20076 -10.97781 -10.49897 -10.12944 -9.79671 -9.45273 -9.10728 -8.95704 -4.78810 0.31208 0.44195 0.46739 1.24853 1.69493 1.71051 1.95408 2.04738 2.12925 2.25680 2.41941 2.72897 3.40875 3.47754 3.61112 3.65864 3.66264 3.81614 3.85023 3.92603 4.00894 4.01294 4.05307 4.10863 4.13502 4.15144 4.33120 4.37143 4.40055 4.44640 4.48447 4.60529 4.64847 4.66345 4.69936 4.73414 4.75284 4.82001 4.88507 4.96816 4.97582 5.03804 5.11262 5.16533 5.36004 5.40766 5.43193 5.50425 5.56340 5.62616 5.76747 5.78443 5.97752 6.30547 6.37218 6.49105 6.61293 7.21406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.100 0.900 7 C -0.135 4.135 8 C 0.122 3.878 9 H 0.107 0.893 10 N -0.716 5.716 11 C 0.594 3.406 12 O -0.520 6.520 13 C -0.066 4.066 14 C -0.041 4.041 15 C -0.090 4.090 16 C -0.210 4.210 17 C -0.034 4.034 18 O -0.528 6.528 19 Si 0.652 3.348 20 C 0.065 3.935 21 C -0.103 4.103 22 N -0.534 5.534 23 C -0.144 4.144 24 C -0.080 4.080 25 C -0.153 4.153 26 C -0.083 4.083 27 C -0.207 4.207 28 H 0.055 0.945 29 H 0.056 0.944 30 H 0.100 0.900 31 H 0.099 0.901 32 H 0.075 0.925 33 H 0.394 0.606 34 H 0.065 0.935 35 H 0.074 0.926 36 H 0.076 0.924 37 H 0.112 0.888 38 H 0.374 0.626 39 H -0.255 1.255 40 H -0.261 1.261 41 H 0.087 0.913 42 H 0.087 0.913 43 H 0.102 0.898 44 H 0.416 0.584 45 H 0.073 0.927 46 H 0.096 0.904 47 H 0.130 0.870 48 H 0.125 0.875 49 H 0.125 0.875 50 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.087 -0.723 -2.672 8.548 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.081 4.081 6 H 0.118 0.882 7 C -0.173 4.173 8 C 0.017 3.983 9 H 0.125 0.875 10 N -0.367 5.367 11 C 0.382 3.618 12 O -0.396 6.396 13 C -0.178 4.178 14 C -0.050 4.050 15 C -0.147 4.147 16 C -0.217 4.217 17 C -0.144 4.144 18 O -0.334 6.334 19 Si 0.554 3.446 20 C -0.053 4.053 21 C -0.159 4.159 22 N -0.132 5.132 23 C -0.183 4.183 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.101 4.101 27 C -0.225 4.225 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.119 0.881 31 H 0.117 0.883 32 H 0.093 0.907 33 H 0.227 0.773 34 H 0.083 0.917 35 H 0.092 0.908 36 H 0.095 0.905 37 H 0.130 0.870 38 H 0.221 0.779 39 H -0.180 1.180 40 H -0.186 1.186 41 H 0.106 0.894 42 H 0.106 0.894 43 H 0.120 0.880 44 H 0.253 0.747 45 H 0.092 0.908 46 H 0.114 0.886 47 H 0.148 0.852 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -7.184 -1.080 -2.321 7.626 hybrid contribution -0.919 1.039 0.586 1.506 sum -8.103 -0.041 -1.735 8.287 Atomic orbital electron populations 1.23078 0.78213 1.04089 1.01473 1.86032 1.21416 1.26857 1.88677 1.18853 0.91795 0.84253 0.96701 1.19026 0.90097 0.95349 1.05935 1.21439 0.93981 0.95788 0.96896 0.88207 1.23430 0.95299 1.02247 0.96328 1.21834 1.00566 0.79361 0.96529 0.87475 1.45549 1.13141 1.07675 1.70305 1.16997 0.83599 0.84563 0.76609 1.90842 1.29318 1.68828 1.50583 1.20088 0.88611 0.90681 1.18374 1.19790 0.95329 0.90883 0.98969 1.20391 0.90675 1.02068 1.01577 1.19583 0.93671 0.95725 1.12682 1.24235 0.95712 0.98597 0.95903 1.86556 1.33401 1.83542 1.29896 0.95593 0.83278 0.79418 0.86359 1.20153 0.95199 0.85294 1.04639 1.20415 0.98123 0.93376 1.03953 1.41754 1.11386 1.06289 1.53724 1.23635 0.95122 1.01382 0.98150 1.20887 1.00087 0.91004 0.97790 1.21089 0.93935 0.98543 1.03587 1.20984 0.94796 0.97058 0.97295 1.21264 1.00115 0.92427 1.08736 0.92592 0.92554 0.88132 0.88288 0.90669 0.77252 0.91650 0.90766 0.90534 0.87029 0.77892 1.18032 1.18563 0.89433 0.89421 0.88015 0.74681 0.90795 0.88599 0.85185 0.85708 0.85731 0.85464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.27 9.43 -19.41 -0.18 -0.45 16 3 C 0.13 0.19 6.66 -39.22 -0.26 -0.07 16 4 C -0.10 -0.09 5.30 -104.47 -0.55 -0.65 16 5 C -0.06 0.03 3.76 -90.81 -0.34 -0.31 16 6 H 0.10 -0.03 7.33 -51.93 -0.38 -0.41 16 7 C -0.14 0.17 7.29 -25.92 -0.19 -0.02 16 8 C 0.12 -0.01 4.29 -67.13 -0.29 -0.29 16 9 H 0.11 0.15 7.50 -51.93 -0.39 -0.24 16 10 N -0.72 0.11 5.26 -54.33 -0.29 -0.17 16 11 C 0.59 1.78 7.79 -12.85 -0.10 1.68 16 12 O -0.52 -3.38 14.42 5.20 0.07 -3.30 16 13 C -0.07 -0.14 7.06 -81.98 -0.58 -0.72 16 14 C -0.04 -0.13 6.15 -104.16 -0.64 -0.77 16 15 C -0.09 -0.33 8.72 36.00 0.31 -0.02 16 16 C -0.21 -0.26 5.38 -105.02 -0.57 -0.82 16 17 C -0.03 -0.02 3.00 36.01 0.11 0.08 16 18 O -0.53 -1.20 10.66 -35.23 -0.38 -1.58 16 19 Si 0.65 -0.41 26.76 -169.99 -4.55 -4.96 16 20 C 0.07 -0.07 6.84 -81.95 -0.56 -0.63 16 21 C -0.10 0.49 8.21 36.01 0.30 0.78 16 22 N -0.53 0.70 5.99 -5.69 -0.03 0.66 16 23 C -0.14 0.03 7.27 -25.77 -0.19 -0.16 16 24 C -0.08 -0.02 8.61 -39.61 -0.34 -0.36 16 25 C -0.15 -0.04 10.04 -39.56 -0.40 -0.43 16 26 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 27 C -0.21 -0.14 9.04 -39.43 -0.36 -0.50 16 28 H 0.06 -0.15 7.65 -51.93 -0.40 -0.54 16 29 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 30 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 31 H 0.10 -0.15 7.72 -51.93 -0.40 -0.55 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.39 -1.08 7.83 -40.82 -0.32 -1.40 16 34 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 35 H 0.07 0.27 7.11 -51.93 -0.37 -0.10 16 36 H 0.08 0.39 6.48 -51.93 -0.34 0.06 16 37 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 38 H 0.37 0.04 8.70 45.56 0.40 0.44 16 39 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 40 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 41 H 0.09 -0.46 7.13 -51.93 -0.37 -0.83 16 42 H 0.09 -0.57 8.14 -51.93 -0.42 -0.99 16 43 H 0.10 -0.61 5.17 -51.93 -0.27 -0.87 16 44 H 0.42 -1.88 8.19 -40.82 -0.33 -2.21 16 45 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 46 H 0.10 -0.07 6.33 -51.93 -0.33 -0.40 16 47 H 0.13 -0.18 6.67 -52.49 -0.35 -0.53 16 48 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 49 H 0.12 -0.18 8.06 -52.48 -0.42 -0.61 16 50 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 LS Contribution 394.58 15.07 5.95 5.95 Total: 0.00 -9.49 394.58 -10.60 -20.09 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -7.15 Total: -13.54 kcal Atomic # 6 Polarization: 1.35 SS G_CDS: -4.05 Total: -2.70 kcal Atomic # 7 Polarization: 0.81 SS G_CDS: -0.32 Total: 0.49 kcal Atomic # 8 Polarization: -4.85 SS G_CDS: -0.48 Total: -5.33 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -4.55 Total: -4.96 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -9.49 -10.60 -20.09 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12297754.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.669 kcal (2) G-P(sol) polarization free energy of solvation -9.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.184 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.089 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds