Wall clock time and date at job start Sun Mar 7 2021 05:05:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35715 * 117.00185 * 2 1 4 4 C 1.38689 * 119.85698 * 359.97438 * 3 2 1 5 5 C 1.38443 * 120.02611 * 180.02562 * 4 3 2 6 6 O 1.35656 * 120.11870 * 179.97438 * 5 4 3 7 7 C 1.42905 * 117.00004 * 359.97438 * 6 5 4 8 8 C 1.40303 * 119.76402 * 359.94840 * 5 4 3 9 9 C 1.47290 * 120.13506 * 180.02562 * 8 5 4 10 10 O 1.21621 * 120.00551 * 0.04940 * 9 8 5 11 11 N 1.34779 * 119.99974 * 180.02562 * 9 8 5 12 12 C 1.46500 * 120.00297 * 180.02562 * 11 9 8 13 13 H 1.08999 * 112.84546 * 23.80143 * 12 11 9 14 14 C 1.53783 * 113.61459 * 154.99672 * 12 11 9 15 15 C 1.53780 * 87.07992 * 89.11553 * 14 12 11 16 16 H 1.08993 * 113.61602 * 270.88311 * 15 14 12 17 17 C 1.50703 * 113.61396 * 139.97612 * 15 14 12 18 18 C 1.38712 * 120.02486 * 119.72328 * 17 15 14 19 19 O 1.35906 * 120.05500 * 0.02562 * 18 17 15 20 20 C 1.42894 * 116.99800 * 179.97438 * 19 18 17 21 21 C 1.38753 * 119.88934 * 179.75277 * 18 17 15 22 22 C 1.38126 * 119.94309 * 0.52360 * 21 18 17 23 23 C 1.38295 * 120.05350 * 359.73170 * 22 21 18 24 24 C 1.38166 * 120.03082 * 300.00146 * 17 15 14 25 25 C 1.53777 * 113.61239 * 252.49561 * 12 11 9 26 26 C 1.39860 * 119.72494 * 0.07259 * 8 5 4 27 27 C 1.37545 * 119.96393 * 359.94976 * 26 8 5 28 28 C 1.50703 * 119.87416 * 180.02562 * 27 26 8 29 29 O 1.42902 * 109.47223 * 254.99889 * 28 27 26 30 30 Si 1.86292 * 109.47207 * 15.00378 * 28 27 26 31 31 H 1.08997 * 109.47172 * 59.99771 * 1 2 3 32 32 H 1.09004 * 109.47030 * 180.02562 * 1 2 3 33 33 H 1.09003 * 109.46942 * 299.99314 * 1 2 3 34 34 H 1.07992 * 119.98704 * 359.97438 * 4 3 2 35 35 H 1.09000 * 109.47051 * 180.02562 * 7 6 5 36 36 H 1.08998 * 109.46944 * 300.00412 * 7 6 5 37 37 H 1.08999 * 109.46520 * 60.00554 * 7 6 5 38 38 H 0.97006 * 119.99902 * 359.97438 * 11 9 8 39 39 H 1.09002 * 113.61455 * 203.66474 * 14 12 11 40 40 H 1.09002 * 113.61240 * 334.48238 * 14 12 11 41 41 H 1.09000 * 109.47675 * 300.00014 * 20 19 18 42 42 H 1.09002 * 109.47581 * 60.00094 * 20 19 18 43 43 H 1.09006 * 109.47253 * 180.02562 * 20 19 18 44 44 H 1.07993 * 120.02740 * 180.27789 * 21 18 17 45 45 H 1.07988 * 119.97418 * 179.74634 * 22 21 18 46 46 H 1.07992 * 119.94194 * 180.02562 * 23 22 21 47 47 H 1.07997 * 119.97082 * 359.97438 * 24 17 15 48 48 H 1.08999 * 113.61776 * 25.43331 * 25 12 11 49 49 H 1.08998 * 113.61084 * 156.33602 * 25 12 11 50 50 H 1.07997 * 120.01050 * 180.23201 * 26 8 5 51 51 H 1.09003 * 109.46872 * 135.00537 * 28 27 26 52 52 H 0.96701 * 114.00112 * 300.00850 * 29 28 27 53 53 H 1.48498 * 110.00166 * 59.99979 * 30 28 27 54 54 H 1.48503 * 110.00112 * 181.31347 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 6 1.2870 2.3705 -0.0005 5 6 1.9119 3.6059 -0.0011 6 8 1.1721 4.7429 -0.0021 7 6 -0.2490 4.5924 -0.0032 8 6 3.3131 3.6776 0.0000 9 6 3.9864 4.9876 0.0000 10 8 3.3278 6.0100 0.0000 11 7 5.3326 5.0533 0.0006 12 6 6.0024 6.3563 0.0011 13 1 5.3784 7.1527 0.4065 14 6 7.4196 6.3201 0.5972 15 6 7.9229 6.0023 -0.8207 16 1 7.9496 4.9362 -1.0458 17 6 9.2043 6.7098 -1.1791 18 6 10.3345 5.9754 -1.5066 19 8 10.2877 4.6171 -1.5051 20 6 11.4891 3.9262 -1.8529 21 6 11.5114 6.6297 -1.8411 22 6 11.5579 8.0102 -1.8369 23 6 10.4312 8.7401 -1.5049 24 6 9.2560 8.0905 -1.1763 25 6 6.6615 6.7106 -1.3423 26 6 4.0678 2.5001 0.0001 27 6 3.4352 1.2787 0.0002 28 6 4.2504 0.0112 0.0009 29 8 4.2153 -0.5784 -1.3004 30 14 6.0130 0.4067 0.4562 31 1 -0.3633 0.5139 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 -0.3633 0.5137 0.8901 34 1 0.2087 2.3111 -0.0014 35 1 -0.7186 5.5760 -0.0044 36 1 -0.5554 4.0427 -0.8932 37 1 -0.5568 4.0436 0.8868 38 1 5.8580 4.2379 0.0013 39 1 7.7590 7.2846 0.9751 40 1 7.5734 5.5088 1.3087 41 1 11.7912 4.2077 -2.8617 42 1 12.2783 4.1928 -1.1498 43 1 11.3145 2.8510 -1.8131 44 1 12.3915 6.0601 -2.1008 45 1 12.4748 8.5199 -2.0932 46 1 10.4694 9.8193 -1.5025 47 1 8.3774 8.6628 -0.9175 48 1 6.2038 6.2137 -2.1977 49 1 6.7937 7.7818 -1.4946 50 1 5.1466 2.5499 0.0047 51 1 3.8353 -0.6873 0.7275 52 1 3.3268 -0.8107 -1.6031 53 1 6.0631 1.0204 1.8075 54 1 6.8343 -0.8303 0.4296 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12297780.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:33 Heat of formation + Delta-G solvation = -85.081950 kcal Electronic energy + Delta-G solvation = -38321.660538 eV Core-core repulsion = 33385.752301 eV Total energy + Delta-G solvation = -4935.908237 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.181 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -42.17878 -41.57115 -40.68316 -40.06961 -39.14652 -38.38981 -37.94082 -37.00424 -34.57135 -32.28600 -32.17976 -31.24504 -30.97980 -29.00163 -28.25865 -28.03645 -26.59948 -26.26874 -26.04284 -24.62864 -23.24205 -22.86863 -22.37301 -21.61708 -20.22034 -19.85780 -19.08041 -18.66891 -18.54514 -17.76263 -17.39652 -17.23702 -17.14122 -16.79305 -16.58821 -16.57287 -16.50221 -16.28601 -15.81479 -15.79039 -15.56217 -15.44747 -15.28840 -15.02172 -14.76916 -14.34685 -14.25534 -14.21182 -14.06150 -13.92226 -13.56547 -13.40119 -13.35961 -13.05081 -12.91616 -12.68843 -12.66782 -12.55530 -12.52688 -12.22175 -12.18913 -11.94264 -11.68452 -11.65815 -11.56233 -11.36571 -11.26003 -11.07045 -10.87024 -10.07809 -9.93228 -9.69528 -9.21265 -8.99951 -4.94987 -0.29848 0.06197 0.41035 0.55438 1.35486 1.59217 1.73465 1.95759 2.03929 2.09439 2.16641 2.46280 2.58842 2.82752 3.42789 3.49676 3.56990 3.66352 3.72067 3.75407 3.82445 3.93014 3.99205 4.07033 4.09535 4.15289 4.19361 4.21549 4.25892 4.26574 4.27104 4.29125 4.34286 4.40354 4.44804 4.52954 4.56073 4.62663 4.66243 4.72513 4.74089 4.77738 4.82151 4.86073 4.87231 4.95991 4.99993 5.03687 5.10993 5.17183 5.25202 5.27698 5.47465 5.55598 5.65879 5.75135 5.92182 5.96920 6.25597 6.51980 6.55542 6.61303 7.26130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.317 6.317 3 C 0.206 3.794 4 C -0.306 4.306 5 C 0.216 3.784 6 O -0.303 6.303 7 C 0.010 3.990 8 C -0.225 4.225 9 C 0.566 3.434 10 O -0.562 6.562 11 N -0.702 5.702 12 C 0.119 3.881 13 H 0.089 0.911 14 C -0.126 4.126 15 C -0.059 4.059 16 H 0.106 0.894 17 C -0.114 4.114 18 C 0.114 3.886 19 O -0.326 6.326 20 C 0.019 3.981 21 C -0.218 4.218 22 C -0.095 4.095 23 C -0.165 4.165 24 C -0.087 4.087 25 C -0.141 4.141 26 C 0.007 3.993 27 C -0.199 4.199 28 C -0.072 4.072 29 O -0.546 6.546 30 Si 0.794 3.206 31 H 0.071 0.929 32 H 0.123 0.877 33 H 0.067 0.933 34 H 0.166 0.834 35 H 0.113 0.887 36 H 0.072 0.928 37 H 0.071 0.929 38 H 0.411 0.589 39 H 0.102 0.898 40 H 0.084 0.916 41 H 0.059 0.941 42 H 0.060 0.940 43 H 0.118 0.882 44 H 0.139 0.861 45 H 0.138 0.862 46 H 0.137 0.863 47 H 0.142 0.858 48 H 0.065 0.935 49 H 0.099 0.901 50 H 0.162 0.838 51 H 0.072 0.928 52 H 0.374 0.626 53 H -0.255 1.255 54 H -0.291 1.291 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.119 -2.411 -0.403 2.447 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.230 6.230 3 C 0.158 3.842 4 C -0.325 4.325 5 C 0.167 3.833 6 O -0.214 6.214 7 C -0.084 4.084 8 C -0.229 4.229 9 C 0.355 3.645 10 O -0.441 6.441 11 N -0.354 5.354 12 C 0.014 3.986 13 H 0.107 0.893 14 C -0.164 4.164 15 C -0.077 4.077 16 H 0.124 0.876 17 C -0.115 4.115 18 C 0.069 3.931 19 O -0.240 6.240 20 C -0.075 4.075 21 C -0.236 4.236 22 C -0.113 4.113 23 C -0.183 4.183 24 C -0.104 4.104 25 C -0.180 4.180 26 C -0.011 4.011 27 C -0.200 4.200 28 C -0.180 4.180 29 O -0.353 6.353 30 Si 0.695 3.305 31 H 0.090 0.910 32 H 0.141 0.859 33 H 0.086 0.914 34 H 0.183 0.817 35 H 0.131 0.869 36 H 0.090 0.910 37 H 0.090 0.910 38 H 0.248 0.752 39 H 0.121 0.879 40 H 0.103 0.897 41 H 0.077 0.923 42 H 0.078 0.922 43 H 0.136 0.864 44 H 0.157 0.843 45 H 0.156 0.844 46 H 0.155 0.845 47 H 0.160 0.840 48 H 0.084 0.916 49 H 0.117 0.883 50 H 0.179 0.821 51 H 0.090 0.910 52 H 0.223 0.777 53 H -0.180 1.180 54 H -0.218 1.218 Dipole moment (debyes) X Y Z Total from point charges 0.640 -1.864 0.246 1.986 hybrid contribution -1.579 -1.121 0.133 1.941 sum -0.939 -2.986 0.378 3.152 Atomic orbital electron populations 1.23492 0.75654 1.06228 1.02744 1.86036 1.24043 1.25961 1.86914 1.18867 0.91363 0.84411 0.89554 1.21413 1.02157 0.90544 1.18402 1.18973 0.90193 0.85662 0.88480 1.86373 1.20736 1.28285 1.86000 1.23483 0.76640 1.05652 1.02654 1.19169 0.91024 0.93698 1.18983 1.18004 0.82416 0.88351 0.75690 1.90812 1.65558 1.36865 1.50870 1.45482 1.05426 1.09481 1.75037 1.21824 0.93472 0.85673 0.97680 0.89286 1.23402 0.92741 1.04034 0.96191 1.21377 0.89889 0.99988 0.96424 0.87608 1.19242 0.93938 0.93285 1.05014 1.19086 0.94248 0.82996 0.96763 1.86025 1.37917 1.15574 1.84462 1.23285 0.85703 0.98120 1.00416 1.21483 0.98020 0.96222 1.07896 1.21239 0.99246 0.93348 0.97418 1.21338 0.93199 1.00991 1.02743 1.21094 0.98725 0.92867 0.97750 1.23568 0.95341 1.01850 0.97205 1.20842 0.99552 0.89133 0.91546 1.19547 0.91257 0.96431 1.12806 1.25412 1.12654 0.91684 0.88213 1.86687 1.34303 1.82210 1.32054 0.92583 0.72725 0.83915 0.81306 0.91011 0.85890 0.91407 0.81656 0.86877 0.90950 0.91026 0.75168 0.87916 0.89691 0.92277 0.92161 0.86385 0.84320 0.84402 0.84497 0.84023 0.91581 0.88260 0.82136 0.91040 0.77737 1.17983 1.21761 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.80 113.37 1.11 1.02 16 2 O -0.32 0.21 9.36 -90.37 -0.85 -0.63 16 3 C 0.21 0.37 6.62 22.60 0.15 0.52 16 4 C -0.31 -0.44 8.01 22.43 0.18 -0.26 16 5 C 0.22 1.43 6.70 22.82 0.15 1.58 16 6 O -0.30 -2.62 8.56 -68.75 -0.59 -3.21 16 7 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 8 C -0.22 -1.43 5.89 -20.00 -0.12 -1.55 16 9 C 0.57 5.20 7.76 86.62 0.67 5.87 16 10 O -0.56 -9.69 14.75 16.87 0.25 -9.44 16 11 N -0.70 -1.68 5.21 -443.43 -2.31 -3.99 16 12 C 0.12 0.24 4.32 45.52 0.20 0.43 16 13 H 0.09 0.52 7.46 -2.39 -0.02 0.50 16 14 C -0.13 0.19 7.29 31.12 0.23 0.42 16 15 C -0.06 0.00 3.74 -11.01 -0.04 -0.04 16 16 H 0.11 -0.03 7.33 -2.39 -0.02 -0.05 16 17 C -0.11 -0.30 5.30 -19.77 -0.10 -0.40 16 18 C 0.11 0.42 6.66 22.51 0.15 0.57 16 19 O -0.33 -0.74 9.43 -92.49 -0.87 -1.62 16 20 C 0.02 -0.07 9.81 113.37 1.11 1.04 16 21 C -0.22 -0.45 9.04 22.37 0.20 -0.24 16 22 C -0.09 -0.11 10.04 22.26 0.22 0.11 16 23 C -0.16 -0.17 10.04 22.28 0.22 0.06 16 24 C -0.09 -0.10 8.61 22.25 0.19 0.09 16 25 C -0.14 -0.14 7.25 31.12 0.23 0.08 16 26 C 0.01 0.01 8.14 22.50 0.18 0.19 16 27 C -0.20 -0.44 5.27 -19.80 -0.10 -0.54 16 28 C -0.07 -0.13 2.32 71.24 0.17 0.04 16 29 O -0.55 -1.63 12.65 -148.98 -1.89 -3.52 16 30 Si 0.79 -0.35 30.16 68.60 2.07 1.72 16 31 H 0.07 -0.66 7.65 -2.39 -0.02 -0.68 16 32 H 0.12 -1.29 8.14 -2.38 -0.02 -1.31 16 33 H 0.07 -0.58 7.65 -2.39 -0.02 -0.60 16 34 H 0.17 -0.67 4.50 -2.91 -0.01 -0.68 16 35 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 36 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 37 H 0.07 -0.33 7.66 -2.39 -0.02 -0.35 16 38 H 0.41 -1.36 6.72 -92.70 -0.62 -1.98 16 39 H 0.10 -0.24 7.72 -2.39 -0.02 -0.26 16 40 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 41 H 0.06 -0.28 7.65 -2.39 -0.02 -0.30 16 42 H 0.06 -0.30 7.67 -2.39 -0.02 -0.32 16 43 H 0.12 -0.88 8.14 -2.38 -0.02 -0.90 16 44 H 0.14 -0.21 6.30 -2.91 -0.02 -0.23 16 45 H 0.14 -0.37 8.06 -2.92 -0.02 -0.39 16 46 H 0.14 -0.34 8.06 -2.91 -0.02 -0.37 16 47 H 0.14 -0.31 6.66 -2.91 -0.02 -0.33 16 48 H 0.07 0.20 8.14 -2.39 -0.02 0.18 16 49 H 0.10 -0.02 6.31 -2.39 -0.02 -0.04 16 50 H 0.16 -0.71 3.43 -2.91 -0.01 -0.72 16 51 H 0.07 0.15 7.82 -2.39 -0.02 0.13 16 52 H 0.37 -0.35 8.59 -74.06 -0.64 -0.99 16 53 H -0.25 -0.27 7.11 99.48 0.71 0.44 16 54 H -0.29 -1.78 7.11 99.48 0.71 -1.07 16 Total: 0.00 -23.59 432.38 1.68 -21.91 By element: Atomic # 1 Polarization: -11.05 SS G_CDS: -0.25 Total: -11.30 kcal Atomic # 6 Polarization: 3.97 SS G_CDS: 6.11 Total: 10.08 kcal Atomic # 7 Polarization: -1.68 SS G_CDS: -2.31 Total: -3.99 kcal Atomic # 8 Polarization: -14.48 SS G_CDS: -3.94 Total: -18.42 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: 2.07 Total: 1.72 kcal Total: -23.59 1.68 -21.91 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12297780.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.167 kcal (2) G-P(sol) polarization free energy of solvation -23.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.761 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.915 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds