Wall clock time and date at job start Sun Mar 7 2021 05:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35903 * 117.00049 * 2 1 4 4 C 1.38715 * 120.05514 * 179.97438 * 3 2 1 5 5 C 1.50697 * 120.02821 * 359.70783 * 4 3 2 6 6 H 1.09005 * 112.84871 * 348.79805 * 5 4 3 7 7 C 1.53775 * 113.61765 * 119.99678 * 5 4 3 8 8 C 1.53782 * 87.08242 * 139.98098 * 7 5 4 9 9 H 1.09004 * 113.61301 * 220.01787 * 8 7 5 10 10 N 1.46495 * 113.61314 * 89.20620 * 8 7 5 11 11 C 1.34773 * 120.00168 * 155.00428 * 10 8 7 12 12 O 1.21578 * 120.00049 * 359.97438 * 11 10 8 13 13 C 1.47688 * 120.00190 * 179.97438 * 11 10 8 14 14 C 1.39828 * 120.16642 * 179.71912 * 13 11 10 15 15 F 1.35100 * 120.11275 * 0.02562 * 14 13 11 16 16 C 1.38331 * 119.77629 * 179.74457 * 14 13 11 17 17 C 1.38206 * 120.11697 * 0.53158 * 16 14 13 18 18 C 1.38460 * 120.33824 * 359.74196 * 17 16 14 19 19 C 1.50694 * 119.88894 * 180.02562 * 18 17 16 20 20 O 1.42906 * 109.47488 * 119.97578 * 19 18 17 21 21 Si 1.86304 * 109.47324 * 359.97438 * 19 18 17 22 22 C 1.37857 * 120.21811 * 359.97438 * 18 17 16 23 23 C 1.53779 * 113.61387 * 217.49719 * 5 4 3 24 24 C 1.38165 * 119.94424 * 179.72952 * 4 3 2 25 25 C 1.38248 * 120.05352 * 359.97438 * 24 4 3 26 26 C 1.38291 * 120.11188 * 359.97438 * 25 24 4 27 27 C 1.38119 * 120.05462 * 0.03793 * 26 25 24 28 28 H 1.09002 * 109.47292 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47202 * 299.99846 * 1 2 3 30 30 H 1.08999 * 109.47281 * 59.99918 * 1 2 3 31 31 H 1.08998 * 113.61800 * 254.53167 * 7 5 4 32 32 H 1.09004 * 113.61112 * 25.35204 * 7 5 4 33 33 H 0.96999 * 119.99878 * 334.99141 * 10 8 7 34 34 H 1.08002 * 119.93776 * 180.27456 * 16 14 13 35 35 H 1.07993 * 119.82809 * 179.72535 * 17 16 14 36 36 H 1.08994 * 109.47223 * 239.97939 * 19 18 17 37 37 H 0.96695 * 114.00176 * 179.97438 * 20 19 18 38 38 H 1.48503 * 110.00030 * 298.68407 * 21 19 18 39 39 H 1.48503 * 109.99922 * 59.99829 * 21 19 18 40 40 H 1.08000 * 120.05677 * 179.97438 * 22 18 17 41 41 H 1.09001 * 113.61630 * 334.56289 * 23 5 4 42 42 H 1.09000 * 113.61448 * 105.47148 * 23 5 4 43 43 H 1.07992 * 119.97399 * 179.97438 * 24 4 3 44 44 H 1.08000 * 119.94403 * 179.97438 * 25 24 4 45 45 H 1.08000 * 119.96991 * 180.02562 * 26 25 24 46 46 H 1.07998 * 120.02414 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0222 0.0078 6 1 3.6590 -0.8693 0.2072 7 6 5.1810 -0.1160 -1.2111 8 6 6.2407 -0.6688 -0.2435 9 1 7.2499 -0.3134 -0.4517 10 7 6.1743 -2.1218 -0.0683 11 6 7.2730 -2.8063 0.3068 12 8 8.3194 -2.2180 0.4993 13 6 7.2058 -4.2709 0.4840 14 6 8.3451 -4.9853 0.8674 15 9 9.5121 -4.3379 1.0778 16 6 8.2718 -6.3563 1.0362 17 6 7.0793 -7.0193 0.8160 18 6 5.9497 -6.3175 0.4307 19 6 4.6546 -7.0506 0.1939 20 8 3.6547 -6.5513 1.0845 21 14 4.9062 -8.8709 0.5006 22 6 6.0056 -4.9502 0.2641 23 6 5.5260 0.1208 0.8658 24 6 4.0560 2.5171 -0.0051 25 6 3.3019 3.6757 -0.0118 26 6 1.9208 3.6047 -0.0135 27 6 1.2914 2.3753 -0.0076 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 4.8347 -0.8459 -1.9428 32 1 5.4547 0.8380 -1.6618 33 1 5.3394 -2.5911 -0.2220 34 1 9.1491 -6.9100 1.3366 35 1 7.0285 -8.0903 0.9448 36 1 4.3331 -6.8969 -0.8362 37 1 2.7927 -6.9786 0.9874 38 1 5.9208 -9.4091 -0.4408 39 1 5.3448 -9.0940 1.9018 40 1 5.1230 -4.4054 -0.0369 41 1 5.8953 1.1395 0.9838 42 1 5.4582 -0.4181 1.8109 43 1 5.1344 2.5752 -0.0043 44 1 3.7922 4.6380 -0.0158 45 1 1.3340 4.5113 -0.0191 46 1 0.2128 2.3203 -0.0093 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:39 Heat of formation + Delta-G solvation = -57.635884 kcal Electronic energy + Delta-G solvation = -31316.737005 eV Core-core repulsion = 26861.004565 eV Total energy + Delta-G solvation = -4455.732440 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -49.83678 -41.81400 -41.12303 -40.21777 -39.13413 -38.03986 -37.58418 -34.71874 -32.86642 -32.47326 -31.55233 -31.06238 -28.26828 -26.70990 -26.70203 -26.47637 -25.28572 -23.50306 -22.96816 -22.41507 -21.55480 -20.13457 -19.20372 -18.98810 -18.66317 -18.26606 -17.71426 -17.37468 -16.88928 -16.71911 -16.68726 -16.65614 -16.35541 -15.85332 -15.71800 -15.57967 -15.39088 -15.15913 -15.07178 -14.64805 -14.42499 -14.26836 -14.15085 -14.01573 -13.88778 -13.53189 -13.36567 -13.10953 -13.05661 -12.81731 -12.59990 -12.54255 -12.31090 -12.08205 -12.07787 -11.73928 -11.66416 -11.14981 -10.96608 -10.52793 -10.41004 -10.06001 -9.80259 -9.74502 -9.05613 -5.11343 -0.51688 -0.09314 0.35805 0.51150 1.11052 1.49878 1.66726 1.81518 1.98288 2.31568 2.47537 2.77497 3.01785 3.11051 3.35965 3.43834 3.50945 3.60315 3.66274 3.72503 3.87574 3.89364 3.97813 4.02204 4.06330 4.15649 4.16347 4.19044 4.20574 4.41778 4.42904 4.45828 4.54053 4.64737 4.65238 4.69254 4.73510 4.75155 4.83706 4.86696 4.94162 5.03052 5.05393 5.08512 5.17284 5.40816 5.47326 5.52911 5.59820 5.67072 5.83214 6.41482 6.42798 6.44662 7.16513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.102 0.898 7 C -0.135 4.135 8 C 0.120 3.880 9 H 0.107 0.893 10 N -0.706 5.706 11 C 0.563 3.437 12 O -0.518 6.518 13 C -0.173 4.173 14 C 0.167 3.833 15 F -0.109 7.109 16 C -0.155 4.155 17 C -0.067 4.067 18 C -0.095 4.095 19 C -0.071 4.071 20 O -0.545 6.545 21 Si 0.683 3.317 22 C -0.027 4.027 23 C -0.145 4.145 24 C -0.080 4.080 25 C -0.154 4.154 26 C -0.084 4.084 27 C -0.207 4.207 28 H 0.101 0.899 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.076 0.924 32 H 0.099 0.901 33 H 0.401 0.599 34 H 0.150 0.850 35 H 0.133 0.867 36 H 0.080 0.920 37 H 0.385 0.615 38 H -0.252 1.252 39 H -0.248 1.248 40 H 0.141 0.859 41 H 0.096 0.904 42 H 0.074 0.926 43 H 0.130 0.870 44 H 0.124 0.876 45 H 0.124 0.876 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.078 -3.158 -2.586 9.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.085 3.915 4 C -0.103 4.103 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.173 4.173 8 C 0.015 3.985 9 H 0.125 0.875 10 N -0.358 5.358 11 C 0.350 3.650 12 O -0.394 6.394 13 C -0.177 4.177 14 C 0.147 3.853 15 F -0.087 7.087 16 C -0.174 4.174 17 C -0.085 4.085 18 C -0.095 4.095 19 C -0.182 4.182 20 O -0.352 6.352 21 Si 0.584 3.416 22 C -0.046 4.046 23 C -0.183 4.183 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.102 4.102 27 C -0.226 4.226 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.095 0.905 32 H 0.117 0.883 33 H 0.237 0.763 34 H 0.167 0.833 35 H 0.150 0.850 36 H 0.098 0.902 37 H 0.233 0.767 38 H -0.177 1.177 39 H -0.172 1.172 40 H 0.159 0.841 41 H 0.114 0.886 42 H 0.093 0.907 43 H 0.148 0.852 44 H 0.142 0.858 45 H 0.142 0.858 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -6.117 -3.140 -2.027 7.169 hybrid contribution -0.454 0.587 -0.126 0.753 sum -6.572 -2.553 -2.153 7.372 Atomic orbital electron populations 1.23078 0.78228 1.04126 1.01412 1.86045 1.21405 1.26782 1.88625 1.18858 0.91796 0.84277 0.96603 1.19029 0.90119 0.95330 1.05862 1.21408 0.94003 0.95908 0.96856 0.87961 1.23437 0.95228 1.02243 0.96379 1.21872 1.00645 0.79302 0.96715 0.87458 1.45523 1.12641 1.07651 1.70007 1.17915 0.83913 0.86091 0.77116 1.90871 1.29209 1.69958 1.49355 1.20070 0.94345 0.94175 1.09082 1.17697 0.81381 0.89972 0.96296 1.91632 1.44574 1.81410 1.91118 1.21106 0.99891 0.92310 1.04058 1.20943 0.92104 0.99582 0.95888 1.19305 0.94040 0.93899 1.02286 1.24636 0.88283 1.09005 0.96226 1.86483 1.22783 1.65619 1.60276 0.95059 0.88531 0.76742 0.81242 1.21006 0.95737 0.93481 0.94334 1.23592 0.95163 1.01331 0.98230 1.20886 1.00071 0.91018 0.97828 1.21085 0.93939 0.98514 1.03675 1.20977 0.94784 0.97049 0.97361 1.21259 1.00112 0.92423 1.08768 0.88075 0.92609 0.92611 0.90545 0.88285 0.76284 0.83257 0.84987 0.90231 0.76659 1.17713 1.17245 0.84126 0.88572 0.90692 0.85212 0.85755 0.85764 0.85464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.42 9.43 -19.43 -0.18 -0.60 16 3 C 0.13 0.24 6.66 -39.22 -0.26 -0.02 16 4 C -0.10 -0.14 5.30 -104.47 -0.55 -0.69 16 5 C -0.06 -0.01 3.75 -90.96 -0.34 -0.35 16 6 H 0.10 0.05 7.33 -51.93 -0.38 -0.33 16 7 C -0.13 0.09 7.29 -25.92 -0.19 -0.10 16 8 C 0.12 0.09 4.32 -67.12 -0.29 -0.20 16 9 H 0.11 0.23 7.46 -51.93 -0.39 -0.15 16 10 N -0.71 -0.69 5.22 -54.01 -0.28 -0.97 16 11 C 0.56 2.33 7.77 -12.40 -0.10 2.23 16 12 O -0.52 -4.14 14.94 5.30 0.08 -4.06 16 13 C -0.17 -0.50 5.88 -104.91 -0.62 -1.12 16 14 C 0.17 0.62 7.29 -38.95 -0.28 0.34 16 15 F -0.11 -0.67 15.55 2.25 0.04 -0.63 16 16 C -0.15 -0.23 10.01 -39.56 -0.40 -0.62 16 17 C -0.07 -0.05 8.66 -39.51 -0.34 -0.40 16 18 C -0.09 -0.05 5.42 -104.68 -0.57 -0.61 16 19 C -0.07 0.15 2.81 36.00 0.10 0.25 16 20 O -0.54 1.04 12.74 -35.23 -0.45 0.59 16 21 Si 0.68 -1.86 29.78 -169.99 -5.06 -6.92 16 22 C -0.03 -0.02 9.09 -39.19 -0.36 -0.37 16 23 C -0.14 -0.07 7.26 -25.92 -0.19 -0.26 16 24 C -0.08 -0.05 8.61 -39.60 -0.34 -0.39 16 25 C -0.15 -0.09 10.04 -39.56 -0.40 -0.49 16 26 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 27 C -0.21 -0.21 9.04 -39.44 -0.36 -0.57 16 28 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 29 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 30 H 0.06 -0.14 7.65 -51.93 -0.40 -0.53 16 31 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.10 -0.11 7.72 -51.93 -0.40 -0.51 16 33 H 0.40 -0.56 6.74 -40.82 -0.27 -0.83 16 34 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 35 H 0.13 -0.05 4.86 -52.49 -0.25 -0.30 16 36 H 0.08 -0.32 7.96 -51.93 -0.41 -0.73 16 37 H 0.39 -2.59 8.74 45.56 0.40 -2.19 16 38 H -0.25 0.10 7.11 56.52 0.40 0.50 16 39 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 40 H 0.14 -0.25 6.41 -52.49 -0.34 -0.59 16 41 H 0.10 -0.02 6.31 -51.93 -0.33 -0.35 16 42 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 43 H 0.13 -0.13 6.66 -52.49 -0.35 -0.48 16 44 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 45 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.13 -0.10 6.30 -52.49 -0.33 -0.43 16 LS Contribution 381.32 15.07 5.75 5.75 Total: 0.00 -9.54 381.32 -10.58 -20.13 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -5.59 Total: -10.40 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -4.88 Total: -2.88 kcal Atomic # 7 Polarization: -0.69 SS G_CDS: -0.28 Total: -0.97 kcal Atomic # 8 Polarization: -3.52 SS G_CDS: -0.55 Total: -4.07 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.04 Total: -0.63 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.06 Total: -6.92 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.54 -10.58 -20.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.509 kcal (2) G-P(sol) polarization free energy of solvation -9.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.585 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds