Wall clock time and date at job start Sun Mar 7 2021 05:05:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35903 * 117.00049 * 2 1 4 4 C 1.38715 * 120.05514 * 179.97438 * 3 2 1 5 5 C 1.50697 * 120.02821 * 359.70783 * 4 3 2 6 6 H 1.09005 * 112.84871 * 348.79805 * 5 4 3 7 7 C 1.53775 * 113.61765 * 119.99678 * 5 4 3 8 8 C 1.53782 * 87.08242 * 139.98098 * 7 5 4 9 9 H 1.09004 * 113.61301 * 220.01787 * 8 7 5 10 10 N 1.46495 * 113.61314 * 89.20620 * 8 7 5 11 11 C 1.34773 * 120.00168 * 155.00428 * 10 8 7 12 12 O 1.21578 * 120.00049 * 359.97438 * 11 10 8 13 13 C 1.47688 * 120.00190 * 179.97438 * 11 10 8 14 14 C 1.39828 * 120.16642 * 179.71912 * 13 11 10 15 15 F 1.35100 * 120.11275 * 0.02562 * 14 13 11 16 16 C 1.38331 * 119.77629 * 179.74457 * 14 13 11 17 17 C 1.38206 * 120.11697 * 0.53158 * 16 14 13 18 18 C 1.38460 * 120.33824 * 359.74196 * 17 16 14 19 19 C 1.50694 * 119.88894 * 180.02562 * 18 17 16 20 20 O 1.42906 * 109.47488 * 119.97578 * 19 18 17 21 21 Si 1.86304 * 109.47324 * 359.97438 * 19 18 17 22 22 C 1.37857 * 120.21811 * 359.97438 * 18 17 16 23 23 C 1.53779 * 113.61387 * 217.49719 * 5 4 3 24 24 C 1.38165 * 119.94424 * 179.72952 * 4 3 2 25 25 C 1.38248 * 120.05352 * 359.97438 * 24 4 3 26 26 C 1.38291 * 120.11188 * 359.97438 * 25 24 4 27 27 C 1.38119 * 120.05462 * 0.03793 * 26 25 24 28 28 H 1.09002 * 109.47292 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47202 * 299.99846 * 1 2 3 30 30 H 1.08999 * 109.47281 * 59.99918 * 1 2 3 31 31 H 1.08998 * 113.61800 * 254.53167 * 7 5 4 32 32 H 1.09004 * 113.61112 * 25.35204 * 7 5 4 33 33 H 0.96999 * 119.99878 * 334.99141 * 10 8 7 34 34 H 1.08002 * 119.93776 * 180.27456 * 16 14 13 35 35 H 1.07993 * 119.82809 * 179.72535 * 17 16 14 36 36 H 1.08994 * 109.47223 * 239.97939 * 19 18 17 37 37 H 0.96695 * 114.00176 * 179.97438 * 20 19 18 38 38 H 1.48503 * 110.00030 * 298.68407 * 21 19 18 39 39 H 1.48503 * 109.99922 * 59.99829 * 21 19 18 40 40 H 1.08000 * 120.05677 * 179.97438 * 22 18 17 41 41 H 1.09001 * 113.61630 * 334.56289 * 23 5 4 42 42 H 1.09000 * 113.61448 * 105.47148 * 23 5 4 43 43 H 1.07992 * 119.97399 * 179.97438 * 24 4 3 44 44 H 1.08000 * 119.94403 * 179.97438 * 25 24 4 45 45 H 1.08000 * 119.96991 * 180.02562 * 26 25 24 46 46 H 1.07998 * 120.02414 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0222 0.0078 6 1 3.6590 -0.8693 0.2072 7 6 5.1810 -0.1160 -1.2111 8 6 6.2407 -0.6688 -0.2435 9 1 7.2499 -0.3134 -0.4517 10 7 6.1743 -2.1218 -0.0683 11 6 7.2730 -2.8063 0.3068 12 8 8.3194 -2.2180 0.4993 13 6 7.2058 -4.2709 0.4840 14 6 8.3451 -4.9853 0.8674 15 9 9.5121 -4.3379 1.0778 16 6 8.2718 -6.3563 1.0362 17 6 7.0793 -7.0193 0.8160 18 6 5.9497 -6.3175 0.4307 19 6 4.6546 -7.0506 0.1939 20 8 3.6547 -6.5513 1.0845 21 14 4.9062 -8.8709 0.5006 22 6 6.0056 -4.9502 0.2641 23 6 5.5260 0.1208 0.8658 24 6 4.0560 2.5171 -0.0051 25 6 3.3019 3.6757 -0.0118 26 6 1.9208 3.6047 -0.0135 27 6 1.2914 2.3753 -0.0076 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 4.8347 -0.8459 -1.9428 32 1 5.4547 0.8380 -1.6618 33 1 5.3394 -2.5911 -0.2220 34 1 9.1491 -6.9100 1.3366 35 1 7.0285 -8.0903 0.9448 36 1 4.3331 -6.8969 -0.8362 37 1 2.7927 -6.9786 0.9874 38 1 5.9208 -9.4091 -0.4408 39 1 5.3448 -9.0940 1.9018 40 1 5.1230 -4.4054 -0.0369 41 1 5.8953 1.1395 0.9838 42 1 5.4582 -0.4181 1.8109 43 1 5.1344 2.5752 -0.0043 44 1 3.7922 4.6380 -0.0158 45 1 1.3340 4.5113 -0.0191 46 1 0.2128 2.3203 -0.0093 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:38 Heat of formation + Delta-G solvation = -56.003570 kcal Electronic energy + Delta-G solvation = -31316.666222 eV Core-core repulsion = 26861.004565 eV Total energy + Delta-G solvation = -4455.661657 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -50.14634 -41.91114 -41.20707 -40.26950 -39.27752 -38.04595 -37.44355 -34.93334 -32.94942 -32.51443 -31.59637 -31.04673 -28.14840 -26.73209 -26.68430 -26.53342 -25.38626 -23.55165 -22.97521 -22.47119 -21.71760 -20.21349 -19.28964 -19.05014 -18.61575 -18.26260 -17.83434 -17.38999 -17.04842 -16.90552 -16.69011 -16.64000 -16.40526 -15.99866 -15.97286 -15.50213 -15.35930 -15.19450 -15.10550 -14.66918 -14.54496 -14.31590 -14.10909 -14.03602 -13.95880 -13.55064 -13.42884 -13.16377 -12.99853 -12.76311 -12.68255 -12.50391 -12.29915 -12.01149 -11.99674 -11.79631 -11.67149 -11.25610 -11.19171 -10.56466 -10.39390 -10.19737 -9.88248 -9.76420 -9.07129 -4.90917 -0.67333 -0.18076 0.34353 0.48943 1.30177 1.46119 1.68790 1.82245 1.98822 2.32227 2.39351 2.75924 2.87985 3.22368 3.25124 3.39702 3.46312 3.63767 3.65189 3.67850 3.87461 3.91047 3.97882 4.05896 4.09406 4.18745 4.24255 4.33184 4.38952 4.44872 4.48014 4.49162 4.57313 4.64807 4.66619 4.69975 4.74434 4.74743 4.77452 4.80629 4.91201 4.97622 4.99364 5.09117 5.12515 5.39378 5.41124 5.43216 5.58270 5.64241 5.85696 6.27272 6.45087 6.93424 6.95374 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.329 6.329 3 C 0.114 3.886 4 C -0.116 4.116 5 C -0.056 4.056 6 H 0.100 0.900 7 C -0.121 4.121 8 C 0.114 3.886 9 H 0.091 0.909 10 N -0.690 5.690 11 C 0.559 3.441 12 O -0.567 6.567 13 C -0.183 4.183 14 C 0.135 3.865 15 F -0.132 7.132 16 C -0.153 4.153 17 C -0.074 4.074 18 C -0.100 4.100 19 C -0.074 4.074 20 O -0.561 6.561 21 Si 0.766 3.234 22 C -0.020 4.020 23 C -0.142 4.142 24 C -0.087 4.087 25 C -0.164 4.164 26 C -0.093 4.093 27 C -0.217 4.217 28 H 0.118 0.882 29 H 0.059 0.941 30 H 0.061 0.939 31 H 0.085 0.915 32 H 0.106 0.894 33 H 0.414 0.586 34 H 0.164 0.836 35 H 0.142 0.858 36 H 0.109 0.891 37 H 0.407 0.593 38 H -0.284 1.284 39 H -0.295 1.295 40 H 0.166 0.834 41 H 0.102 0.898 42 H 0.062 0.938 43 H 0.142 0.858 44 H 0.138 0.862 45 H 0.140 0.860 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.367 -3.560 -3.419 11.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.243 6.243 3 C 0.068 3.932 4 C -0.117 4.117 5 C -0.074 4.074 6 H 0.119 0.881 7 C -0.159 4.159 8 C 0.009 3.991 9 H 0.109 0.891 10 N -0.341 5.341 11 C 0.347 3.653 12 O -0.446 6.446 13 C -0.187 4.187 14 C 0.115 3.885 15 F -0.110 7.110 16 C -0.171 4.171 17 C -0.091 4.091 18 C -0.100 4.100 19 C -0.184 4.184 20 O -0.372 6.372 21 Si 0.672 3.328 22 C -0.039 4.039 23 C -0.181 4.181 24 C -0.105 4.105 25 C -0.182 4.182 26 C -0.111 4.111 27 C -0.235 4.235 28 H 0.136 0.864 29 H 0.077 0.923 30 H 0.080 0.920 31 H 0.104 0.896 32 H 0.124 0.876 33 H 0.253 0.747 34 H 0.182 0.818 35 H 0.159 0.841 36 H 0.127 0.873 37 H 0.259 0.741 38 H -0.211 1.211 39 H -0.223 1.223 40 H 0.184 0.816 41 H 0.120 0.880 42 H 0.081 0.919 43 H 0.160 0.840 44 H 0.156 0.844 45 H 0.158 0.842 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -8.490 -3.544 -2.883 9.641 hybrid contribution 0.183 0.666 0.170 0.711 sum -8.307 -2.879 -2.713 9.201 Atomic orbital electron populations 1.23288 0.76867 1.05433 1.01888 1.86018 1.22908 1.26712 1.88666 1.19082 0.92213 0.84781 0.97076 1.19215 0.90350 0.95856 1.06289 1.21321 0.93572 0.95572 0.96934 0.88132 1.23377 0.93870 1.02622 0.96036 1.21913 1.00289 0.79101 0.97767 0.89127 1.45424 1.12394 1.07809 1.68519 1.18189 0.83831 0.86703 0.76585 1.90839 1.31045 1.70932 1.51828 1.20118 0.95146 0.93584 1.09874 1.18069 0.81161 0.90963 0.98335 1.91565 1.45828 1.81972 1.91656 1.21282 1.00895 0.91512 1.03449 1.21176 0.92132 1.00177 0.95665 1.19752 0.95239 0.94081 1.00911 1.24726 0.87311 1.08542 0.97810 1.86434 1.24081 1.66237 1.60433 0.94126 0.86866 0.74937 0.76844 1.21242 0.95472 0.93718 0.93454 1.23584 0.95502 1.01430 0.97544 1.21096 1.00816 0.90957 0.97614 1.21355 0.94199 0.99179 1.03442 1.21263 0.95131 0.97643 0.97053 1.21492 1.00940 0.92394 1.08682 0.86417 0.92253 0.91990 0.89591 0.87609 0.74720 0.81800 0.84069 0.87339 0.74110 1.21069 1.22312 0.81623 0.87952 0.91920 0.84048 0.84366 0.84192 0.84156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.76 9.43 -92.45 -0.87 -1.63 16 3 C 0.11 0.41 6.66 22.51 0.15 0.56 16 4 C -0.12 -0.32 5.30 -19.77 -0.10 -0.42 16 5 C -0.06 -0.02 3.75 -11.02 -0.04 -0.06 16 6 H 0.10 0.07 7.33 -2.38 -0.02 0.05 16 7 C -0.12 0.20 7.29 31.12 0.23 0.42 16 8 C 0.11 0.27 4.32 45.52 0.20 0.46 16 9 H 0.09 0.56 7.46 -2.38 -0.02 0.54 16 10 N -0.69 -1.76 5.22 -443.06 -2.31 -4.07 16 11 C 0.56 5.58 7.77 86.74 0.67 6.25 16 12 O -0.57 -10.71 14.94 -3.96 -0.06 -10.76 16 13 C -0.18 -1.29 5.88 -20.05 -0.12 -1.41 16 14 C 0.14 1.28 7.29 22.68 0.17 1.45 16 15 F -0.13 -2.02 15.55 44.97 0.70 -1.32 16 16 C -0.15 -0.62 10.01 22.28 0.22 -0.40 16 17 C -0.07 -0.13 8.66 22.32 0.19 0.06 16 18 C -0.10 -0.01 5.42 -19.90 -0.11 -0.12 16 19 C -0.07 0.46 2.81 71.23 0.20 0.66 16 20 O -0.56 3.41 12.74 -148.98 -1.90 1.51 16 21 Si 0.77 -4.94 29.78 68.60 2.04 -2.89 16 22 C -0.02 -0.01 9.09 22.52 0.20 0.19 16 23 C -0.14 -0.24 7.26 31.12 0.23 -0.01 16 24 C -0.09 -0.10 8.61 22.25 0.19 0.09 16 25 C -0.16 -0.13 10.04 22.28 0.22 0.09 16 26 C -0.09 -0.08 10.04 22.25 0.22 0.15 16 27 C -0.22 -0.37 9.04 22.36 0.20 -0.17 16 28 H 0.12 -0.95 8.14 -2.39 -0.02 -0.97 16 29 H 0.06 -0.30 7.67 -2.39 -0.02 -0.32 16 30 H 0.06 -0.35 7.65 -2.39 -0.02 -0.37 16 31 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 32 H 0.11 -0.28 7.72 -2.38 -0.02 -0.29 16 33 H 0.41 -1.35 6.74 -92.71 -0.62 -1.97 16 34 H 0.16 -0.01 8.06 -2.91 -0.02 -0.04 16 35 H 0.14 -0.09 4.86 -2.91 -0.01 -0.11 16 36 H 0.11 -1.23 7.96 -2.39 -0.02 -1.25 16 37 H 0.41 -6.57 8.74 -74.06 -0.65 -7.22 16 38 H -0.28 0.35 7.11 99.48 0.71 1.06 16 39 H -0.30 -0.44 7.11 99.48 0.71 0.27 16 40 H 0.17 -0.88 6.41 -2.91 -0.02 -0.89 16 41 H 0.10 0.03 6.31 -2.39 -0.02 0.01 16 42 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 43 H 0.14 -0.30 6.66 -2.91 -0.02 -0.32 16 44 H 0.14 -0.38 8.06 -2.91 -0.02 -0.41 16 45 H 0.14 -0.45 8.06 -2.91 -0.02 -0.47 16 46 H 0.14 -0.29 6.30 -2.91 -0.02 -0.31 16 Total: 0.00 -24.87 381.32 1.46 -23.41 By element: Atomic # 1 Polarization: -12.88 SS G_CDS: -0.18 Total: -13.06 kcal Atomic # 6 Polarization: 4.79 SS G_CDS: 4.04 Total: 8.83 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: -2.31 Total: -4.07 kcal Atomic # 8 Polarization: -8.06 SS G_CDS: -2.83 Total: -10.89 kcal Atomic # 9 Polarization: -2.02 SS G_CDS: 0.70 Total: -1.32 kcal Atomic # 14 Polarization: -4.94 SS G_CDS: 2.04 Total: -2.89 kcal Total: -24.87 1.46 -23.41 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.595 kcal (2) G-P(sol) polarization free energy of solvation -24.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.465 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.461 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds