Wall clock time and date at job start Sun Mar 7 2021 05:05:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35905 * 116.99372 * 2 1 4 4 C 1.38711 * 120.05193 * 180.02562 * 3 2 1 5 5 C 1.50705 * 120.02929 * 359.97438 * 4 3 2 6 6 H 1.09006 * 112.84739 * 10.92949 * 5 4 3 7 7 C 1.54051 * 113.69578 * 142.19164 * 5 4 3 8 8 C 1.53785 * 86.98409 * 139.99375 * 7 5 4 9 9 H 1.08994 * 113.61251 * 219.98446 * 8 7 5 10 10 N 1.46496 * 113.61490 * 89.16426 * 8 7 5 11 11 C 1.34772 * 120.00214 * 105.86395 * 10 8 7 12 12 O 1.21281 * 119.99940 * 359.97438 * 11 10 8 13 13 C 1.50703 * 120.00069 * 180.02562 * 11 10 8 14 14 C 1.50706 * 109.47001 * 179.97438 * 13 11 10 15 15 C 1.38233 * 120.00109 * 269.72485 * 14 13 11 16 16 C 1.38238 * 119.99749 * 179.78525 * 15 14 13 17 17 C 1.38234 * 120.00056 * 0.46903 * 16 15 14 18 18 C 1.50696 * 120.00189 * 179.78529 * 17 16 15 19 19 O 1.42904 * 109.46876 * 119.97813 * 18 17 16 20 20 Si 1.86295 * 109.46942 * 359.97438 * 18 17 16 21 21 C 1.38237 * 120.00048 * 359.76546 * 17 16 15 22 22 C 1.38235 * 120.00123 * 0.02562 * 21 17 16 23 23 C 1.53774 * 113.61904 * 239.72921 * 5 4 3 24 24 C 1.38163 * 119.94560 * 179.72211 * 4 3 2 25 25 C 1.38244 * 120.05174 * 0.27448 * 24 4 3 26 26 C 1.38285 * 120.11656 * 359.97438 * 25 24 4 27 27 C 1.38122 * 120.04956 * 359.97438 * 26 25 24 28 28 H 1.09001 * 109.46680 * 180.02562 * 1 2 3 29 29 H 1.08992 * 109.46995 * 299.99597 * 1 2 3 30 30 H 1.08996 * 109.46964 * 60.00110 * 1 2 3 31 31 H 1.08994 * 113.61297 * 25.49203 * 7 5 4 32 32 H 1.08995 * 113.69457 * 254.50760 * 7 5 4 33 33 H 0.97000 * 119.99972 * 285.86396 * 10 8 7 34 34 H 1.09000 * 109.46978 * 60.00374 * 13 11 10 35 35 H 1.09000 * 109.46976 * 299.99619 * 13 11 10 36 36 H 1.08004 * 119.99934 * 0.02562 * 15 14 13 37 37 H 1.07999 * 119.99919 * 180.25459 * 16 15 14 38 38 H 1.08999 * 109.47304 * 239.97813 * 18 17 16 39 39 H 0.96706 * 113.99427 * 180.02562 * 19 18 17 40 40 H 1.48496 * 110.00402 * 60.00011 * 20 18 17 41 41 H 1.48509 * 110.00172 * 181.31809 * 20 18 17 42 42 H 1.08000 * 120.00539 * 180.02562 * 21 17 16 43 43 H 1.07999 * 120.00181 * 179.97438 * 22 21 17 44 44 H 1.09007 * 113.61752 * 105.38178 * 23 5 4 45 45 H 1.09005 * 113.69151 * 334.49528 * 23 5 4 46 46 H 1.08002 * 119.97186 * 180.24714 * 24 4 3 47 47 H 1.08001 * 119.94063 * 179.97438 * 25 24 4 48 48 H 1.07992 * 119.97728 * 180.02562 * 26 25 24 49 49 H 1.08008 * 120.02479 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4311 1.2850 -0.0005 5 6 4.2538 0.0223 -0.0005 6 1 3.6584 -0.8708 -0.1906 7 6 5.5252 0.1118 -0.8658 8 6 6.2410 -0.6686 0.2494 9 1 7.2515 -0.3135 0.4513 10 7 6.1711 -2.1227 0.0859 11 6 7.2589 -2.8087 -0.3170 12 8 8.2957 -2.2221 -0.5448 13 6 7.1867 -4.3045 -0.4857 14 6 8.5261 -4.8238 -0.9412 15 6 8.8064 -4.9227 -2.2913 16 6 10.0366 -5.3949 -2.7090 17 6 10.9830 -5.7773 -1.7768 18 6 12.3224 -6.2967 -2.2322 19 8 13.3583 -5.4554 -1.7210 20 14 12.3867 -6.2997 -4.0941 21 6 10.7010 -5.6831 -0.4268 22 6 9.4724 -5.2068 -0.0090 23 6 5.1856 -0.1058 1.2160 24 6 4.0559 2.5173 -0.0063 25 6 3.3017 3.6759 -0.0059 26 6 1.9207 3.6049 -0.0001 27 6 1.2914 2.3753 0.0046 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5137 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 5.8955 1.1289 -0.9937 32 1 5.4548 -0.4355 -1.8057 33 1 5.3417 -2.5918 0.2677 34 1 6.4298 -4.5500 -1.2306 35 1 6.9227 -4.7651 0.4662 36 1 8.0656 -4.6273 -3.0196 37 1 10.2571 -5.4682 -3.7637 38 1 12.4632 -7.3122 -1.8622 39 1 14.2497 -5.7305 -1.9756 40 1 12.1959 -4.9209 -4.6112 41 1 13.6907 -6.8396 -4.5564 42 1 11.4405 -5.9815 0.3016 43 1 9.2519 -5.1335 1.0457 44 1 4.8413 -0.8288 1.9556 45 1 5.4639 0.8512 1.6573 46 1 5.1343 2.5754 -0.0108 47 1 3.7920 4.6382 -0.0100 48 1 1.3338 4.5114 -0.0002 49 1 0.2127 2.3203 0.0087 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_12335836.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:05:43 Heat of formation + Delta-G solvation = -23.329365 kcal Electronic energy + Delta-G solvation = -29900.796004 eV Core-core repulsion = 25760.467563 eV Total energy + Delta-G solvation = -4140.328441 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -41.74224 -40.99684 -40.25656 -39.18179 -38.05850 -37.61595 -34.50488 -34.00877 -31.89227 -31.80993 -31.06882 -29.72457 -28.26047 -26.69781 -26.36178 -25.38149 -23.69420 -23.22265 -22.67652 -22.10070 -21.24297 -20.07243 -19.12302 -18.46725 -18.11572 -17.54118 -17.31193 -16.85637 -16.81696 -16.70730 -16.67917 -16.12230 -15.87419 -15.40602 -15.26783 -15.23000 -15.04438 -14.66125 -14.55511 -14.33546 -14.24367 -14.01109 -13.82664 -13.52681 -13.30895 -13.24133 -13.12392 -13.00841 -12.87408 -12.78000 -12.31426 -12.12980 -12.08804 -11.83707 -11.73285 -11.64934 -11.61412 -11.13841 -10.80700 -10.43886 -9.99919 -9.75117 -9.73386 -9.47819 -9.06273 -4.91521 0.35169 0.35588 0.50514 0.59564 1.34502 1.65136 1.72492 2.03011 2.15610 2.30631 2.76970 2.83837 3.42650 3.48458 3.65908 3.67842 3.71803 3.87529 3.90146 3.94808 3.98870 4.03999 4.06651 4.13347 4.15235 4.18190 4.20358 4.28124 4.41884 4.43271 4.44817 4.50559 4.53308 4.59095 4.66439 4.70863 4.75156 4.80420 4.87635 4.95389 5.03085 5.08258 5.09311 5.18963 5.20337 5.40389 5.49306 5.51117 5.60456 5.67772 5.69423 5.69778 5.82636 6.11221 6.41891 6.50460 6.54099 7.31830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.102 0.898 7 C -0.144 4.144 8 C 0.120 3.880 9 H 0.103 0.897 10 N -0.716 5.716 11 C 0.516 3.484 12 O -0.525 6.525 13 C -0.103 4.103 14 C -0.064 4.064 15 C -0.099 4.099 16 C -0.112 4.112 17 C -0.073 4.073 18 C -0.076 4.076 19 O -0.535 6.535 20 Si 0.681 3.319 21 C -0.090 4.090 22 C -0.104 4.104 23 C -0.135 4.135 24 C -0.080 4.080 25 C -0.154 4.154 26 C -0.084 4.084 27 C -0.207 4.207 28 H 0.101 0.899 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.093 0.907 32 H 0.073 0.927 33 H 0.402 0.598 34 H 0.106 0.894 35 H 0.105 0.895 36 H 0.125 0.875 37 H 0.127 0.873 38 H 0.076 0.924 39 H 0.379 0.621 40 H -0.255 1.255 41 H -0.262 1.262 42 H 0.124 0.876 43 H 0.122 0.878 44 H 0.075 0.925 45 H 0.096 0.904 46 H 0.130 0.870 47 H 0.124 0.876 48 H 0.124 0.876 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.007 -2.914 0.446 6.691 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.081 4.081 6 H 0.120 0.880 7 C -0.183 4.183 8 C 0.015 3.985 9 H 0.121 0.879 10 N -0.368 5.368 11 C 0.302 3.698 12 O -0.400 6.400 13 C -0.143 4.143 14 C -0.064 4.064 15 C -0.117 4.117 16 C -0.130 4.130 17 C -0.073 4.073 18 C -0.185 4.185 19 O -0.342 6.342 20 Si 0.582 3.418 21 C -0.108 4.108 22 C -0.122 4.122 23 C -0.173 4.173 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.102 4.102 27 C -0.226 4.226 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.112 0.888 32 H 0.092 0.908 33 H 0.236 0.764 34 H 0.124 0.876 35 H 0.123 0.877 36 H 0.143 0.857 37 H 0.144 0.856 38 H 0.094 0.906 39 H 0.226 0.774 40 H -0.180 1.180 41 H -0.187 1.187 42 H 0.142 0.858 43 H 0.140 0.860 44 H 0.094 0.906 45 H 0.115 0.885 46 H 0.148 0.852 47 H 0.142 0.858 48 H 0.142 0.858 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -5.265 -2.077 -0.183 5.663 hybrid contribution 0.232 0.330 0.667 0.780 sum -5.033 -1.747 0.484 5.350 Atomic orbital electron populations 1.23079 0.78222 1.04124 1.01426 1.86045 1.21410 1.26801 1.88648 1.18855 0.91801 0.84258 0.96643 1.19044 0.90116 0.95388 1.05809 1.21445 0.93952 0.95809 0.96878 0.87977 1.23622 0.95232 1.01311 0.98132 1.21818 1.00260 0.80021 0.96424 0.87891 1.45703 1.14057 1.07257 1.69750 1.20600 0.83340 0.89472 0.76403 1.90769 1.29729 1.70767 1.48687 1.20691 0.96895 0.92202 1.04466 1.19256 0.94750 0.98825 0.93589 1.20877 0.96813 0.98962 0.95072 1.20865 0.94033 0.99533 0.98555 1.19229 0.93553 1.00488 0.94048 1.24808 0.87369 0.95498 1.10873 1.86615 1.17394 1.54778 1.75417 0.95166 0.86441 0.85070 0.75128 1.20924 0.96271 0.98473 0.95101 1.20994 0.93335 0.98624 0.99233 1.23418 0.95367 1.02150 0.96394 1.20886 1.00062 0.91033 0.97826 1.21085 0.93942 0.98522 1.03669 1.20974 0.94780 0.97047 0.97369 1.21263 1.00113 0.92435 1.08773 0.88084 0.92597 0.92604 0.88838 0.90812 0.76382 0.87609 0.87660 0.85698 0.85603 0.90619 0.77365 1.17972 1.18739 0.85795 0.85975 0.90591 0.88519 0.85240 0.85764 0.85765 0.85474 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.39 9.43 -19.44 -0.18 -0.57 16 3 C 0.13 0.23 6.66 -39.22 -0.26 -0.03 16 4 C -0.10 -0.13 5.30 -104.47 -0.55 -0.68 16 5 C -0.06 0.01 3.76 -90.82 -0.34 -0.33 16 6 H 0.10 0.00 7.32 -51.93 -0.38 -0.38 16 7 C -0.14 -0.01 7.27 -25.77 -0.19 -0.20 16 8 C 0.12 0.02 4.29 -67.12 -0.29 -0.27 16 9 H 0.10 0.21 7.50 -51.93 -0.39 -0.18 16 10 N -0.72 0.44 5.26 -53.02 -0.28 0.17 16 11 C 0.52 0.89 7.82 -10.99 -0.09 0.81 16 12 O -0.52 -3.45 15.65 5.56 0.09 -3.36 16 13 C -0.10 0.11 5.83 -29.03 -0.17 -0.06 16 14 C -0.06 -0.11 4.37 -104.62 -0.46 -0.57 16 15 C -0.10 -0.18 9.70 -39.58 -0.38 -0.57 16 16 C -0.11 -0.24 8.67 -39.58 -0.34 -0.59 16 17 C -0.07 -0.21 5.42 -104.63 -0.57 -0.78 16 18 C -0.08 -0.10 2.81 36.00 0.10 0.00 16 19 O -0.53 -1.49 12.74 -35.23 -0.45 -1.94 16 20 Si 0.68 0.22 29.79 -169.99 -5.06 -4.84 16 21 C -0.09 -0.27 9.61 -39.58 -0.38 -0.65 16 22 C -0.10 -0.24 9.70 -39.58 -0.38 -0.62 16 23 C -0.14 0.12 7.28 -25.92 -0.19 -0.06 16 24 C -0.08 -0.05 8.62 -39.61 -0.34 -0.39 16 25 C -0.15 -0.09 10.04 -39.56 -0.40 -0.48 16 26 C -0.08 -0.05 10.04 -39.61 -0.40 -0.45 16 27 C -0.21 -0.20 9.04 -39.44 -0.36 -0.56 16 28 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 29 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 30 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 31 H 0.09 -0.02 6.33 -51.93 -0.33 -0.35 16 32 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 33 H 0.40 -1.30 8.70 -40.82 -0.36 -1.65 16 34 H 0.11 -0.35 8.08 -51.93 -0.42 -0.77 16 35 H 0.11 -0.34 8.09 -51.93 -0.42 -0.76 16 36 H 0.13 -0.02 8.06 -52.48 -0.42 -0.44 16 37 H 0.13 0.04 4.88 -52.49 -0.26 -0.22 16 38 H 0.08 -0.05 7.96 -51.93 -0.41 -0.46 16 39 H 0.38 -0.54 8.74 45.56 0.40 -0.14 16 40 H -0.26 -0.98 7.11 56.52 0.40 -0.58 16 41 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 42 H 0.12 0.26 8.06 -52.49 -0.42 -0.16 16 43 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 44 H 0.08 -0.10 8.14 -51.92 -0.42 -0.52 16 45 H 0.10 -0.10 7.73 -51.93 -0.40 -0.50 16 46 H 0.13 -0.12 6.67 -52.49 -0.35 -0.47 16 47 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 48 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 49 H 0.13 -0.10 6.30 -52.48 -0.33 -0.43 16 LS Contribution 401.51 15.07 6.05 6.05 Total: 0.00 -10.02 401.51 -11.85 -21.87 By element: Atomic # 1 Polarization: -4.82 SS G_CDS: -7.02 Total: -11.84 kcal Atomic # 6 Polarization: -0.54 SS G_CDS: -4.99 Total: -5.53 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.28 Total: 0.17 kcal Atomic # 8 Polarization: -5.32 SS G_CDS: -0.55 Total: -5.87 kcal Atomic # 14 Polarization: 0.22 SS G_CDS: -5.06 Total: -4.84 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -10.02 -11.85 -21.87 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12335836.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.457 kcal (2) G-P(sol) polarization free energy of solvation -10.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.329 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds