Wall clock time and date at job start Sun Mar 7 2021 05:06:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35905 * 116.99555 * 2 1 4 4 C 1.38710 * 120.05135 * 179.97438 * 3 2 1 5 5 C 1.50698 * 120.02994 * 0.02562 * 4 3 2 6 6 H 1.09004 * 112.85185 * 11.19703 * 5 4 3 7 7 C 1.53788 * 113.61544 * 142.49617 * 5 4 3 8 8 C 1.53783 * 87.07981 * 139.98367 * 7 5 4 9 9 H 1.09006 * 113.69086 * 220.01676 * 8 7 5 10 10 N 1.46489 * 113.61580 * 89.11686 * 8 7 5 11 11 C 1.34780 * 119.99887 * 107.50177 * 10 8 7 12 12 O 1.21547 * 120.00272 * 0.02562 * 11 10 8 13 13 C 1.47852 * 120.00150 * 179.97438 * 11 10 8 14 14 C 1.39550 * 120.13533 * 0.02562 * 13 11 10 15 15 C 1.38077 * 119.83736 * 179.97438 * 14 13 11 16 16 Br 1.89101 * 119.93424 * 180.25493 * 15 14 13 17 17 C 1.38425 * 120.12495 * 359.97438 * 15 14 13 18 18 C 1.38362 * 120.28518 * 359.97438 * 17 15 14 19 19 C 1.50696 * 119.92523 * 180.02562 * 18 17 15 20 20 O 1.42894 * 109.47223 * 119.99740 * 19 18 17 21 21 Si 1.86307 * 109.46760 * 359.97438 * 19 18 17 22 22 C 1.37945 * 120.15537 * 0.02562 * 18 17 15 23 23 C 1.53775 * 113.61573 * 239.99677 * 5 4 3 24 24 C 1.38172 * 119.94303 * 180.27616 * 4 3 2 25 25 C 1.38244 * 120.05265 * 359.49612 * 24 4 3 26 26 C 1.38287 * 120.11172 * 0.50948 * 25 24 4 27 27 C 1.38120 * 120.05631 * 359.74241 * 26 25 24 28 28 H 1.08996 * 109.47035 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.46865 * 299.99843 * 1 2 3 30 30 H 1.09000 * 109.47388 * 59.99403 * 1 2 3 31 31 H 1.08999 * 113.60993 * 25.43748 * 7 5 4 32 32 H 1.08996 * 113.61601 * 254.52679 * 7 5 4 33 33 H 0.96999 * 120.00571 * 287.50102 * 10 8 7 34 34 H 1.07993 * 120.08192 * 359.97418 * 14 13 11 35 35 H 1.08000 * 119.85849 * 179.97438 * 17 15 14 36 36 H 1.09000 * 109.46998 * 240.00508 * 19 18 17 37 37 H 0.96696 * 114.00338 * 300.00228 * 20 19 18 38 38 H 1.48494 * 109.99926 * 58.68040 * 21 19 18 39 39 H 1.48502 * 109.99776 * 180.02562 * 21 19 18 40 40 H 1.07999 * 120.06210 * 180.02562 * 22 18 17 41 41 H 1.09000 * 113.61795 * 105.47136 * 23 5 4 42 42 H 1.09002 * 113.68866 * 334.57695 * 23 5 4 43 43 H 1.08002 * 119.96956 * 179.75271 * 24 4 3 44 44 H 1.07999 * 119.94199 * 180.25077 * 25 24 4 45 45 H 1.08000 * 119.97114 * 179.72579 * 26 25 24 46 46 H 1.07994 * 120.02675 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4310 1.2849 0.0005 5 6 4.2537 0.0223 0.0005 6 1 3.6592 -0.8703 -0.1950 7 6 5.5269 0.1165 -0.8568 8 6 6.2405 -0.6674 0.2573 9 1 7.2497 -0.3118 0.4656 10 7 6.1730 -2.1208 0.0878 11 6 7.2717 -2.8079 -0.2827 12 8 8.3187 -2.2215 -0.4759 13 6 7.2038 -4.2750 -0.4532 14 6 6.0033 -4.9511 -0.2316 15 6 5.9467 -6.3213 -0.3931 16 35 4.3196 -7.2394 -0.1006 17 6 7.0772 -7.0232 -0.7743 18 6 8.2698 -6.3578 -0.9964 19 6 9.4955 -7.1300 -1.4117 20 8 9.9483 -6.6576 -2.6820 21 14 9.0760 -8.9410 -1.5355 22 6 8.3396 -4.9892 -0.8385 23 6 5.1798 -0.1095 1.2210 24 6 4.0559 2.5173 0.0063 25 6 3.3018 3.6759 0.0010 26 6 1.9207 3.6048 0.0006 27 6 1.2913 2.3753 0.0001 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 5.8961 1.1347 -0.9796 32 1 5.4600 -0.4272 -1.7991 33 1 5.3376 -2.5889 0.2424 34 1 5.1208 -4.4042 0.0654 35 1 7.0281 -8.0949 -0.8990 36 1 10.2819 -6.9895 -0.6703 37 1 9.2979 -6.7516 -3.3913 38 1 7.9825 -9.1429 -2.5197 39 1 10.2767 -9.7136 -1.9438 40 1 9.2712 -4.4713 -1.0126 41 1 4.8328 -0.8357 1.9561 42 1 5.4549 0.8461 1.6673 43 1 5.1343 2.5753 0.0108 44 1 3.7921 4.6382 0.0014 45 1 1.3338 4.5114 0.0009 46 1 0.2128 2.3204 -0.0007 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_12335870.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:17 Heat of formation + Delta-G solvation = -14.116084 kcal Electronic energy + Delta-G solvation = -30483.217411 eV Core-core repulsion = 26159.008104 eV Total energy + Delta-G solvation = -4324.209307 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.91553 -41.31427 -40.34913 -39.19399 -38.07220 -37.79904 -34.81675 -33.64363 -33.07167 -31.69325 -31.08258 -30.49500 -28.29243 -27.12949 -26.74582 -26.54781 -25.07999 -23.15582 -22.85917 -22.58783 -21.61708 -20.19306 -19.28984 -19.02272 -17.94144 -17.76549 -17.35163 -17.21770 -16.77254 -16.71617 -16.51327 -16.42454 -15.98577 -15.74595 -15.41949 -15.39949 -15.13991 -14.97936 -14.74305 -14.39029 -14.27671 -14.15971 -14.01135 -13.53745 -13.30700 -13.17842 -13.07872 -13.02392 -12.84226 -12.35064 -12.29772 -12.10231 -11.99498 -11.84411 -11.77801 -11.70028 -11.48449 -11.19044 -11.09177 -10.74141 -10.35573 -10.10452 -9.93654 -9.77132 -9.07775 -5.06947 -0.52237 -0.19689 0.33642 0.38400 0.49133 1.12898 1.48983 1.57518 1.85827 1.96145 2.29562 2.48329 2.75331 3.17267 3.27055 3.35970 3.44474 3.62937 3.67007 3.75002 3.82607 3.86103 3.94053 3.94675 4.03587 4.13280 4.17494 4.18031 4.19111 4.23992 4.40089 4.42548 4.48086 4.52593 4.61958 4.66759 4.70792 4.72026 4.79662 4.89494 4.91944 4.98350 5.04927 5.06178 5.13358 5.35211 5.38806 5.44950 5.57198 5.63748 5.81047 6.28587 6.35970 6.40645 7.09164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.064 4.064 6 H 0.102 0.898 7 C -0.144 4.144 8 C 0.119 3.881 9 H 0.108 0.892 10 N -0.707 5.707 11 C 0.564 3.436 12 O -0.525 6.525 13 C -0.127 4.127 14 C -0.053 4.053 15 C -0.094 4.094 16 Br -0.033 7.033 17 C -0.064 4.064 18 C -0.118 4.118 19 C -0.073 4.073 20 O -0.524 6.524 21 Si 0.679 3.321 22 C -0.017 4.017 23 C -0.135 4.135 24 C -0.080 4.080 25 C -0.154 4.154 26 C -0.083 4.083 27 C -0.207 4.207 28 H 0.101 0.899 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.096 0.904 32 H 0.074 0.926 33 H 0.401 0.599 34 H 0.139 0.861 35 H 0.142 0.858 36 H 0.126 0.874 37 H 0.378 0.622 38 H -0.255 1.255 39 H -0.250 1.250 40 H 0.149 0.851 41 H 0.076 0.924 42 H 0.099 0.901 43 H 0.130 0.870 44 H 0.125 0.875 45 H 0.124 0.876 46 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.736 -0.506 2.338 5.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.183 4.183 8 C 0.014 3.986 9 H 0.126 0.874 10 N -0.359 5.359 11 C 0.351 3.649 12 O -0.401 6.401 13 C -0.131 4.131 14 C -0.074 4.074 15 C -0.174 4.174 16 Br 0.053 6.947 17 C -0.083 4.083 18 C -0.119 4.119 19 C -0.183 4.183 20 O -0.331 6.331 21 Si 0.580 3.420 22 C -0.036 4.036 23 C -0.173 4.173 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.101 4.101 27 C -0.226 4.226 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.114 0.886 32 H 0.093 0.907 33 H 0.237 0.763 34 H 0.156 0.844 35 H 0.159 0.841 36 H 0.144 0.856 37 H 0.225 0.775 38 H -0.180 1.180 39 H -0.175 1.175 40 H 0.167 0.833 41 H 0.095 0.905 42 H 0.117 0.883 43 H 0.148 0.852 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.028 -1.191 2.136 4.712 hybrid contribution -0.799 0.878 -0.996 1.549 sum -4.827 -0.313 1.141 4.970 Atomic orbital electron populations 1.23081 0.78206 1.04138 1.01430 1.86044 1.21420 1.26786 1.88626 1.18859 0.91805 0.84276 0.96588 1.19023 0.90107 0.95324 1.05942 1.21408 0.94001 0.95918 0.96860 0.88002 1.23592 0.95171 1.01384 0.98136 1.21891 1.00673 0.79266 0.96753 0.87392 1.45579 1.12704 1.07674 1.69910 1.18088 0.83717 0.86378 0.76710 1.90823 1.29370 1.70181 1.49745 1.19955 0.94471 0.93393 1.05301 1.21299 0.97529 0.92569 0.95977 1.21639 0.93424 0.94757 1.07551 1.96845 1.26295 1.76140 1.95419 1.21215 0.91012 1.00087 0.95992 1.20318 0.95345 0.94512 1.01749 1.25052 0.96945 1.08335 0.87999 1.86642 1.44304 1.84254 1.17856 0.95092 0.80986 0.75021 0.90937 1.21300 0.98409 0.92792 0.91126 1.23442 0.95200 1.02288 0.96404 1.20883 1.00055 0.91010 0.97841 1.21084 0.93935 0.98525 1.03665 1.20979 0.94792 0.97050 0.97312 1.21263 1.00125 0.92431 1.08744 0.88083 0.92573 0.92612 0.88559 0.90721 0.76305 0.84375 0.84051 0.85636 0.77468 1.17986 1.17498 0.83341 0.90492 0.88261 0.85208 0.85745 0.85761 0.85471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.35 9.43 -19.44 -0.18 -0.53 16 3 C 0.13 0.20 6.66 -39.22 -0.26 -0.06 16 4 C -0.10 -0.10 5.30 -104.47 -0.55 -0.65 16 5 C -0.06 0.03 3.75 -90.96 -0.34 -0.31 16 6 H 0.10 -0.02 7.33 -51.93 -0.38 -0.40 16 7 C -0.14 0.06 7.25 -25.91 -0.19 -0.13 16 8 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 9 H 0.11 0.11 7.46 -51.93 -0.39 -0.28 16 10 N -0.71 0.29 5.21 -53.96 -0.28 0.01 16 11 C 0.56 1.17 7.77 -12.32 -0.10 1.08 16 12 O -0.52 -3.02 15.95 5.32 0.08 -2.93 16 13 C -0.13 -0.08 5.87 -104.97 -0.62 -0.70 16 14 C -0.05 0.05 9.28 -39.15 -0.36 -0.31 16 15 C -0.09 0.06 6.22 -39.57 -0.25 -0.19 16 16 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 17 C -0.06 0.06 8.41 -39.47 -0.33 -0.27 16 18 C -0.12 0.06 5.38 -104.69 -0.56 -0.50 16 19 C -0.07 0.07 2.82 36.00 0.10 0.17 16 20 O -0.52 -0.37 12.76 -35.23 -0.45 -0.82 16 21 Si 0.68 -1.10 29.78 -169.99 -5.06 -6.16 16 22 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 23 C -0.14 0.18 7.29 -25.92 -0.19 -0.01 16 24 C -0.08 -0.02 8.60 -39.60 -0.34 -0.36 16 25 C -0.15 -0.04 10.04 -39.56 -0.40 -0.44 16 26 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 27 C -0.21 -0.17 9.04 -39.44 -0.36 -0.52 16 28 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 31 H 0.10 -0.10 6.32 -51.93 -0.33 -0.42 16 32 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 33 H 0.40 -1.03 6.74 -40.82 -0.27 -1.31 16 34 H 0.14 -0.42 6.40 -52.49 -0.34 -0.76 16 35 H 0.14 -0.34 4.86 -52.49 -0.26 -0.60 16 36 H 0.13 -0.22 7.96 -51.93 -0.41 -0.63 16 37 H 0.38 -0.81 8.70 45.56 0.40 -0.42 16 38 H -0.26 -0.05 7.11 56.52 0.40 0.36 16 39 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 40 H 0.15 0.27 7.65 -52.49 -0.40 -0.13 16 41 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.10 -0.17 7.72 -51.93 -0.40 -0.57 16 43 H 0.13 -0.20 6.67 -52.49 -0.35 -0.55 16 44 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 45 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 46 H 0.13 -0.11 6.30 -52.49 -0.33 -0.44 16 LS Contribution 398.04 15.07 6.00 6.00 Total: 0.00 -7.64 398.04 -12.55 -20.19 By element: Atomic # 1 Polarization: -4.54 SS G_CDS: -5.57 Total: -10.11 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -4.80 Total: -3.37 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.28 Total: 0.01 kcal Atomic # 8 Polarization: -3.74 SS G_CDS: -0.55 Total: -4.29 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.06 Total: -6.16 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -7.64 -12.55 -20.19 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12335870.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.074 kcal (2) G-P(sol) polarization free energy of solvation -7.638 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.190 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds