Wall clock time and date at job start Sun Mar 7 2021 05:06:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35905 * 116.99555 * 2 1 4 4 C 1.38710 * 120.05135 * 179.97438 * 3 2 1 5 5 C 1.50698 * 120.02994 * 0.02562 * 4 3 2 6 6 H 1.09004 * 112.85185 * 11.19703 * 5 4 3 7 7 C 1.53788 * 113.61544 * 142.49617 * 5 4 3 8 8 C 1.53783 * 87.07981 * 139.98367 * 7 5 4 9 9 H 1.09006 * 113.69086 * 220.01676 * 8 7 5 10 10 N 1.46489 * 113.61580 * 89.11686 * 8 7 5 11 11 C 1.34780 * 119.99887 * 107.50177 * 10 8 7 12 12 O 1.21547 * 120.00272 * 0.02562 * 11 10 8 13 13 C 1.47852 * 120.00150 * 179.97438 * 11 10 8 14 14 C 1.39550 * 120.13533 * 0.02562 * 13 11 10 15 15 C 1.38077 * 119.83736 * 179.97438 * 14 13 11 16 16 Br 1.89101 * 119.93424 * 180.25493 * 15 14 13 17 17 C 1.38425 * 120.12495 * 359.97438 * 15 14 13 18 18 C 1.38362 * 120.28518 * 359.97438 * 17 15 14 19 19 C 1.50696 * 119.92523 * 180.02562 * 18 17 15 20 20 O 1.42894 * 109.47223 * 119.99740 * 19 18 17 21 21 Si 1.86307 * 109.46760 * 359.97438 * 19 18 17 22 22 C 1.37945 * 120.15537 * 0.02562 * 18 17 15 23 23 C 1.53775 * 113.61573 * 239.99677 * 5 4 3 24 24 C 1.38172 * 119.94303 * 180.27616 * 4 3 2 25 25 C 1.38244 * 120.05265 * 359.49612 * 24 4 3 26 26 C 1.38287 * 120.11172 * 0.50948 * 25 24 4 27 27 C 1.38120 * 120.05631 * 359.74241 * 26 25 24 28 28 H 1.08996 * 109.47035 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.46865 * 299.99843 * 1 2 3 30 30 H 1.09000 * 109.47388 * 59.99403 * 1 2 3 31 31 H 1.08999 * 113.60993 * 25.43748 * 7 5 4 32 32 H 1.08996 * 113.61601 * 254.52679 * 7 5 4 33 33 H 0.96999 * 120.00571 * 287.50102 * 10 8 7 34 34 H 1.07993 * 120.08192 * 359.97418 * 14 13 11 35 35 H 1.08000 * 119.85849 * 179.97438 * 17 15 14 36 36 H 1.09000 * 109.46998 * 240.00508 * 19 18 17 37 37 H 0.96696 * 114.00338 * 300.00228 * 20 19 18 38 38 H 1.48494 * 109.99926 * 58.68040 * 21 19 18 39 39 H 1.48502 * 109.99776 * 180.02562 * 21 19 18 40 40 H 1.07999 * 120.06210 * 180.02562 * 22 18 17 41 41 H 1.09000 * 113.61795 * 105.47136 * 23 5 4 42 42 H 1.09002 * 113.68866 * 334.57695 * 23 5 4 43 43 H 1.08002 * 119.96956 * 179.75271 * 24 4 3 44 44 H 1.07999 * 119.94199 * 180.25077 * 25 24 4 45 45 H 1.08000 * 119.97114 * 179.72579 * 26 25 24 46 46 H 1.07994 * 120.02675 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4310 1.2849 0.0005 5 6 4.2537 0.0223 0.0005 6 1 3.6592 -0.8703 -0.1950 7 6 5.5269 0.1165 -0.8568 8 6 6.2405 -0.6674 0.2573 9 1 7.2497 -0.3118 0.4656 10 7 6.1730 -2.1208 0.0878 11 6 7.2717 -2.8079 -0.2827 12 8 8.3187 -2.2215 -0.4759 13 6 7.2038 -4.2750 -0.4532 14 6 6.0033 -4.9511 -0.2316 15 6 5.9467 -6.3213 -0.3931 16 35 4.3196 -7.2394 -0.1006 17 6 7.0772 -7.0232 -0.7743 18 6 8.2698 -6.3578 -0.9964 19 6 9.4955 -7.1300 -1.4117 20 8 9.9483 -6.6576 -2.6820 21 14 9.0760 -8.9410 -1.5355 22 6 8.3396 -4.9892 -0.8385 23 6 5.1798 -0.1095 1.2210 24 6 4.0559 2.5173 0.0063 25 6 3.3018 3.6759 0.0010 26 6 1.9207 3.6048 0.0006 27 6 1.2913 2.3753 0.0001 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 5.8961 1.1347 -0.9796 32 1 5.4600 -0.4272 -1.7991 33 1 5.3376 -2.5889 0.2424 34 1 5.1208 -4.4042 0.0654 35 1 7.0281 -8.0949 -0.8990 36 1 10.2819 -6.9895 -0.6703 37 1 9.2979 -6.7516 -3.3913 38 1 7.9825 -9.1429 -2.5197 39 1 10.2767 -9.7136 -1.9438 40 1 9.2712 -4.4713 -1.0126 41 1 4.8328 -0.8357 1.9561 42 1 5.4549 0.8461 1.6673 43 1 5.1343 2.5753 0.0108 44 1 3.7921 4.6382 0.0014 45 1 1.3338 4.5114 0.0009 46 1 0.2128 2.3204 -0.0007 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12335870.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:15 Heat of formation + Delta-G solvation = -9.652879 kcal Electronic energy + Delta-G solvation = -30483.023872 eV Core-core repulsion = 26159.008104 eV Total energy + Delta-G solvation = -4324.015768 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -41.94609 -41.31256 -40.34850 -39.26034 -38.04974 -37.81427 -34.91236 -33.62510 -33.06152 -31.67871 -31.04828 -30.45977 -28.16890 -27.09666 -26.70575 -26.55121 -25.09302 -23.12315 -22.84262 -22.57765 -21.67802 -20.19689 -19.29442 -18.99929 -17.94986 -17.77008 -17.32694 -17.22542 -16.74945 -16.65499 -16.49805 -16.41985 -16.08059 -15.78885 -15.40750 -15.35390 -15.12561 -14.97650 -14.75067 -14.35597 -14.27661 -14.14194 -13.99225 -13.48527 -13.29733 -13.16368 -13.03741 -12.99218 -12.76247 -12.32051 -12.28499 -12.02253 -11.97489 -11.84682 -11.77844 -11.66896 -11.46513 -11.22190 -11.17324 -10.73276 -10.38872 -10.12245 -9.91228 -9.76059 -9.07269 -4.97300 -0.52901 -0.17055 0.34557 0.42695 0.48932 1.20562 1.50310 1.55502 1.87938 1.95651 2.38271 2.44488 2.76194 3.24383 3.30733 3.42269 3.47494 3.66150 3.69413 3.79694 3.86748 3.91844 3.95238 3.99336 4.10213 4.19241 4.20147 4.29019 4.32360 4.36705 4.45841 4.48658 4.54733 4.62533 4.70023 4.73504 4.75248 4.78487 4.82091 4.91744 4.93303 5.00180 5.07086 5.10162 5.14951 5.35779 5.40809 5.44698 5.58951 5.65107 5.85684 6.33501 6.42078 6.44266 7.00772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.329 6.329 3 C 0.113 3.887 4 C -0.116 4.116 5 C -0.058 4.058 6 H 0.099 0.901 7 C -0.141 4.141 8 C 0.117 3.883 9 H 0.094 0.906 10 N -0.694 5.694 11 C 0.563 3.437 12 O -0.570 6.570 13 C -0.135 4.135 14 C -0.045 4.045 15 C -0.099 4.099 16 Br -0.028 7.028 17 C -0.060 4.060 18 C -0.113 4.113 19 C -0.083 4.083 20 O -0.545 6.545 21 Si 0.762 3.238 22 C -0.028 4.028 23 C -0.124 4.124 24 C -0.086 4.086 25 C -0.163 4.163 26 C -0.093 4.093 27 C -0.217 4.217 28 H 0.116 0.884 29 H 0.061 0.939 30 H 0.059 0.941 31 H 0.102 0.898 32 H 0.064 0.936 33 H 0.413 0.587 34 H 0.159 0.841 35 H 0.157 0.843 36 H 0.132 0.868 37 H 0.388 0.612 38 H -0.274 1.274 39 H -0.297 1.297 40 H 0.132 0.868 41 H 0.084 0.916 42 H 0.105 0.895 43 H 0.144 0.856 44 H 0.139 0.861 45 H 0.139 0.861 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.091 -0.834 2.915 6.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.243 6.243 3 C 0.067 3.933 4 C -0.117 4.117 5 C -0.076 4.076 6 H 0.118 0.882 7 C -0.180 4.180 8 C 0.011 3.989 9 H 0.112 0.888 10 N -0.345 5.345 11 C 0.351 3.649 12 O -0.450 6.450 13 C -0.139 4.139 14 C -0.065 4.065 15 C -0.178 4.178 16 Br 0.057 6.943 17 C -0.079 4.079 18 C -0.115 4.115 19 C -0.192 4.192 20 O -0.354 6.354 21 Si 0.666 3.334 22 C -0.048 4.048 23 C -0.161 4.161 24 C -0.104 4.104 25 C -0.181 4.181 26 C -0.111 4.111 27 C -0.236 4.236 28 H 0.134 0.866 29 H 0.080 0.920 30 H 0.078 0.922 31 H 0.120 0.880 32 H 0.083 0.917 33 H 0.251 0.749 34 H 0.176 0.824 35 H 0.175 0.825 36 H 0.149 0.851 37 H 0.237 0.763 38 H -0.200 1.200 39 H -0.225 1.225 40 H 0.150 0.850 41 H 0.102 0.898 42 H 0.123 0.877 43 H 0.161 0.839 44 H 0.157 0.843 45 H 0.157 0.843 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -5.439 -1.502 2.732 6.269 hybrid contribution -0.402 0.979 -1.207 1.605 sum -5.841 -0.523 1.525 6.059 Atomic orbital electron populations 1.23274 0.76963 1.05324 1.01892 1.86016 1.22814 1.26783 1.88701 1.19095 0.92290 0.84707 0.97164 1.19236 0.90279 0.95972 1.06180 1.21340 0.93674 0.95445 0.97137 0.88242 1.23578 0.95302 1.01522 0.97564 1.21892 1.00265 0.79230 0.97479 0.88829 1.45505 1.12624 1.07742 1.68667 1.18336 0.83505 0.86993 0.76090 1.90797 1.31032 1.71098 1.52039 1.19851 0.95132 0.92600 1.06362 1.21448 0.97473 0.92639 0.94949 1.21727 0.93662 0.94886 1.07540 1.96858 1.25994 1.76016 1.95396 1.21383 0.90578 1.00838 0.95132 1.20269 0.95703 0.93865 1.01615 1.25304 0.97132 1.09078 0.87673 1.86611 1.45328 1.84653 1.18758 0.94184 0.77684 0.72226 0.89330 1.21258 0.98053 0.93485 0.91959 1.23388 0.94067 1.02619 0.96067 1.21105 1.00863 0.90881 0.97543 1.21358 0.94146 0.99246 1.03392 1.21256 0.95192 0.97581 0.97109 1.21488 1.00895 0.92466 1.08757 0.86590 0.92016 0.92229 0.87994 0.91734 0.74896 0.82359 0.82549 0.85053 0.76280 1.19971 1.22459 0.84980 0.89764 0.87674 0.83880 0.84330 0.84271 0.84309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.75 9.43 -92.48 -0.87 -1.63 16 3 C 0.11 0.38 6.66 22.51 0.15 0.53 16 4 C -0.12 -0.23 5.30 -19.77 -0.10 -0.34 16 5 C -0.06 0.05 3.75 -11.01 -0.04 0.01 16 6 H 0.10 -0.03 7.33 -2.38 -0.02 -0.05 16 7 C -0.14 0.04 7.25 31.12 0.23 0.27 16 8 C 0.12 0.00 4.32 45.52 0.20 0.20 16 9 H 0.09 0.32 7.46 -2.38 -0.02 0.30 16 10 N -0.69 0.25 5.21 -442.90 -2.31 -2.06 16 11 C 0.56 3.01 7.77 86.79 0.67 3.69 16 12 O -0.57 -7.79 15.95 -3.86 -0.06 -7.85 16 13 C -0.14 -0.26 5.87 -20.09 -0.12 -0.37 16 14 C -0.04 0.11 9.28 22.55 0.21 0.32 16 15 C -0.10 0.21 6.22 22.28 0.14 0.35 16 16 Br -0.03 0.07 33.69 -20.37 -0.69 -0.62 16 17 C -0.06 0.16 8.41 22.34 0.19 0.35 16 18 C -0.11 0.10 5.38 -19.91 -0.11 -0.01 16 19 C -0.08 0.13 2.82 71.23 0.20 0.33 16 20 O -0.55 -1.21 12.76 -148.98 -1.90 -3.11 16 21 Si 0.76 -2.58 29.78 68.60 2.04 -0.54 16 22 C -0.03 -0.08 9.15 22.53 0.21 0.13 16 23 C -0.12 0.35 7.29 31.12 0.23 0.58 16 24 C -0.09 -0.03 8.60 22.26 0.19 0.16 16 25 C -0.16 -0.04 10.04 22.28 0.22 0.18 16 26 C -0.09 -0.06 10.04 22.25 0.22 0.17 16 27 C -0.22 -0.35 9.04 22.36 0.20 -0.15 16 28 H 0.12 -0.86 8.14 -2.39 -0.02 -0.88 16 29 H 0.06 -0.32 7.66 -2.39 -0.02 -0.34 16 30 H 0.06 -0.29 7.66 -2.39 -0.02 -0.31 16 31 H 0.10 -0.16 6.32 -2.39 -0.02 -0.17 16 32 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 33 H 0.41 -2.27 6.74 -92.71 -0.62 -2.89 16 34 H 0.16 -1.15 6.40 -2.91 -0.02 -1.17 16 35 H 0.16 -0.96 4.86 -2.91 -0.01 -0.97 16 36 H 0.13 -0.40 7.96 -2.39 -0.02 -0.42 16 37 H 0.39 -1.41 8.70 -74.06 -0.64 -2.05 16 38 H -0.27 0.08 7.11 99.48 0.71 0.79 16 39 H -0.30 -1.33 7.11 99.48 0.71 -0.62 16 40 H 0.13 0.80 7.65 -2.91 -0.02 0.78 16 41 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 42 H 0.10 -0.39 7.72 -2.39 -0.02 -0.41 16 43 H 0.14 -0.47 6.67 -2.91 -0.02 -0.49 16 44 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 45 H 0.14 -0.46 8.06 -2.91 -0.02 -0.49 16 46 H 0.14 -0.26 6.30 -2.91 -0.02 -0.28 16 Total: 0.00 -18.82 398.04 0.03 -18.79 By element: Atomic # 1 Polarization: -10.22 SS G_CDS: -0.18 Total: -10.40 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 4.00 Total: 7.41 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -2.31 Total: -2.06 kcal Atomic # 8 Polarization: -9.75 SS G_CDS: -2.84 Total: -12.59 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.04 Total: -0.54 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.62 kcal Total: -18.82 0.03 -18.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12335870.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.134 kcal (2) G-P(sol) polarization free energy of solvation -18.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.787 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds