Wall clock time and date at job start Sun Mar 7 2021 05:06:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35900 * 116.99672 * 2 1 4 4 C 1.38716 * 120.05141 * 179.97438 * 3 2 1 5 5 C 1.50697 * 120.02800 * 0.02562 * 4 3 2 6 6 H 1.08997 * 112.85221 * 10.91846 * 5 4 3 7 7 C 1.54051 * 113.69552 * 142.19316 * 5 4 3 8 8 C 1.53778 * 86.99023 * 139.98890 * 7 5 4 9 9 H 1.09000 * 113.61835 * 219.98349 * 8 7 5 10 10 N 1.46496 * 113.61561 * 89.15920 * 8 7 5 11 11 C 1.34778 * 120.00189 * 105.86776 * 10 8 7 12 12 O 1.21695 * 119.99358 * 0.02562 * 11 10 8 13 13 C 1.46426 * 120.00168 * 179.97438 * 11 10 8 14 14 C 1.34809 * 119.99884 * 179.97438 * 13 11 10 15 15 C 1.47206 * 120.00112 * 179.97438 * 14 13 11 16 16 C 1.39831 * 120.17048 * 180.02562 * 15 14 13 17 17 C 1.37895 * 119.82533 * 179.97438 * 16 15 14 18 18 C 1.38402 * 120.17010 * 359.97438 * 17 16 15 19 19 C 1.50697 * 119.82289 * 180.02562 * 18 17 16 20 20 O 1.42899 * 109.47331 * 65.00158 * 19 18 17 21 21 Si 1.86307 * 109.46641 * 184.99813 * 19 18 17 22 22 C 1.38394 * 120.34465 * 0.04281 * 18 17 16 23 23 C 1.37893 * 120.17469 * 359.97438 * 22 18 17 24 24 C 1.53786 * 113.61308 * 239.72253 * 5 4 3 25 25 C 1.38169 * 119.93991 * 179.72326 * 4 3 2 26 26 C 1.38244 * 120.05790 * 0.27782 * 25 4 3 27 27 C 1.38292 * 120.10906 * 359.97438 * 26 25 4 28 28 C 1.38117 * 120.05819 * 359.97438 * 27 26 25 29 29 H 1.09003 * 109.46945 * 60.00087 * 1 2 3 30 30 H 1.09000 * 109.47116 * 179.97438 * 1 2 3 31 31 H 1.08992 * 109.47298 * 299.99803 * 1 2 3 32 32 H 1.08997 * 113.61175 * 25.48269 * 7 5 4 33 33 H 1.09004 * 113.69658 * 254.50772 * 7 5 4 34 34 H 0.97005 * 120.00009 * 285.86726 * 10 8 7 35 35 H 1.07995 * 119.99889 * 0.02562 * 13 11 10 36 36 H 1.08000 * 119.99765 * 0.02562 * 14 13 11 37 37 H 1.08008 * 120.08721 * 0.26083 * 16 15 14 38 38 H 1.08002 * 119.91444 * 180.02562 * 17 16 15 39 39 H 1.08999 * 109.47320 * 304.99501 * 19 18 17 40 40 H 0.96701 * 113.99660 * 179.97438 * 20 19 18 41 41 H 1.48507 * 109.99773 * 178.68230 * 21 19 18 42 42 H 1.48497 * 109.99917 * 299.99925 * 21 19 18 43 43 H 1.08008 * 119.91440 * 179.97438 * 22 18 17 44 44 H 1.07999 * 120.08816 * 179.97438 * 23 22 18 45 45 H 1.08998 * 113.61153 * 105.39198 * 24 5 4 46 46 H 1.08995 * 113.61546 * 334.48661 * 24 5 4 47 47 H 1.08005 * 119.96526 * 180.25119 * 25 4 3 48 48 H 1.08000 * 119.94414 * 179.97438 * 26 25 4 49 49 H 1.08004 * 119.96772 * 179.97438 * 27 26 25 50 50 H 1.07995 * 120.02789 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0222 0.0005 6 1 3.6585 -0.8708 -0.1902 7 6 5.5258 0.1120 -0.8637 8 6 6.2408 -0.6689 0.2515 9 1 7.2512 -0.3139 0.4544 10 7 6.1709 -2.1229 0.0875 11 6 7.2590 -2.8088 -0.3150 12 8 8.2998 -2.2202 -0.5416 13 6 7.1893 -4.2623 -0.4785 14 6 8.2776 -4.9482 -0.8815 15 6 8.2077 -6.4094 -1.0453 16 6 9.3345 -7.1245 -1.4627 17 6 9.2612 -8.4932 -1.6133 18 6 8.0765 -9.1593 -1.3520 19 6 8.0053 -10.6553 -1.5186 20 8 8.8679 -11.2822 -0.5672 21 14 6.2544 -11.2283 -1.2415 22 6 6.9569 -8.4585 -0.9389 23 6 7.0142 -7.0895 -0.7840 24 6 5.1847 -0.1065 1.2177 25 6 4.0559 2.5172 -0.0052 26 6 3.3018 3.6758 -0.0058 27 6 1.9208 3.6047 -0.0010 28 6 1.2914 2.3753 0.0037 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8899 32 1 5.8962 1.1292 -0.9910 33 1 5.4561 -0.4349 -1.8040 34 1 5.3414 -2.5921 0.2685 35 1 6.2658 -4.7846 -0.2769 36 1 9.2010 -4.4257 -1.0835 37 1 10.2612 -6.6067 -1.6621 38 1 10.1308 -9.0470 -1.9352 39 1 8.3202 -10.9240 -2.5269 40 1 8.8721 -12.2479 -0.6167 41 1 6.1644 -12.6981 -1.4341 42 1 5.8131 -10.8679 0.1299 43 1 6.0358 -8.9853 -0.7373 44 1 6.1395 -6.5440 -0.4619 45 1 4.8399 -0.8297 1.9567 46 1 5.4620 0.8511 1.6585 47 1 5.1344 2.5752 -0.0089 48 1 3.7921 4.6381 -0.0099 49 1 1.3339 4.5114 -0.0010 50 1 0.2128 2.3204 0.0070 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12360594.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:24 Heat of formation + Delta-G solvation = -0.163198 kcal Electronic energy + Delta-G solvation = -30600.974318 eV Core-core repulsion = 26333.424297 eV Total energy + Delta-G solvation = -4267.550021 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.166 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -41.73772 -40.90100 -40.48363 -39.36125 -38.05278 -37.85054 -35.16479 -34.57480 -32.26390 -31.92341 -31.17985 -31.03930 -28.16737 -27.37267 -26.68317 -26.06875 -24.22960 -23.90058 -23.05179 -22.53937 -21.99262 -20.53742 -19.99485 -19.11456 -18.66056 -18.55683 -17.47050 -17.33388 -17.05178 -16.68987 -16.64613 -16.57837 -16.12198 -15.94484 -15.59063 -15.36370 -15.28883 -15.10092 -14.94126 -14.64995 -14.36227 -14.27048 -14.03076 -13.99201 -13.87570 -13.57567 -13.46291 -13.13312 -13.01183 -12.97414 -12.74643 -12.32157 -12.26906 -12.05164 -12.01118 -11.75710 -11.71804 -11.63460 -11.32205 -11.14756 -11.07857 -10.49770 -10.11423 -9.97751 -9.75373 -9.24027 -9.06355 -4.93090 -0.55111 0.35314 0.39866 0.49591 0.88104 1.29195 1.59811 1.93974 2.14134 2.21902 2.39299 2.76685 2.77906 3.37468 3.48848 3.56164 3.68540 3.72703 3.76573 3.84832 3.92965 3.94374 4.01106 4.11794 4.16385 4.20421 4.21941 4.32489 4.33528 4.37960 4.39387 4.46896 4.50017 4.55723 4.66050 4.71637 4.74638 4.79580 4.83532 4.85850 4.96094 4.97356 5.02036 5.09601 5.11276 5.16372 5.20140 5.38648 5.41817 5.48237 5.50870 5.59887 5.60683 5.68367 5.86477 5.89682 6.45254 6.53585 6.56391 7.20946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.330 6.330 3 C 0.113 3.887 4 C -0.116 4.116 5 C -0.056 4.056 6 H 0.100 0.900 7 C -0.141 4.141 8 C 0.117 3.883 9 H 0.087 0.913 10 N -0.696 5.696 11 C 0.545 3.455 12 O -0.590 6.590 13 C -0.209 4.209 14 C -0.018 4.018 15 C -0.082 4.082 16 C -0.102 4.102 17 C -0.108 4.108 18 C -0.075 4.075 19 C -0.091 4.091 20 O -0.559 6.559 21 Si 0.766 3.234 22 C -0.125 4.125 23 C -0.095 4.095 24 C -0.124 4.124 25 C -0.087 4.087 26 C -0.163 4.163 27 C -0.093 4.093 28 C -0.217 4.217 29 H 0.060 0.940 30 H 0.116 0.884 31 H 0.061 0.939 32 H 0.099 0.901 33 H 0.064 0.936 34 H 0.417 0.583 35 H 0.163 0.837 36 H 0.124 0.876 37 H 0.139 0.861 38 H 0.132 0.868 39 H 0.095 0.905 40 H 0.395 0.605 41 H -0.288 1.288 42 H -0.295 1.295 43 H 0.145 0.855 44 H 0.158 0.842 45 H 0.083 0.917 46 H 0.102 0.898 47 H 0.142 0.858 48 H 0.139 0.861 49 H 0.140 0.860 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.687 -1.197 -1.431 6.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.244 6.244 3 C 0.068 3.932 4 C -0.117 4.117 5 C -0.074 4.074 6 H 0.119 0.881 7 C -0.179 4.179 8 C 0.011 3.989 9 H 0.105 0.895 10 N -0.346 5.346 11 C 0.336 3.664 12 O -0.473 6.473 13 C -0.230 4.230 14 C -0.038 4.038 15 C -0.082 4.082 16 C -0.120 4.120 17 C -0.126 4.126 18 C -0.075 4.075 19 C -0.199 4.199 20 O -0.369 6.369 21 Si 0.672 3.328 22 C -0.143 4.143 23 C -0.112 4.112 24 C -0.162 4.162 25 C -0.105 4.105 26 C -0.181 4.181 27 C -0.111 4.111 28 C -0.236 4.236 29 H 0.078 0.922 30 H 0.135 0.865 31 H 0.079 0.921 32 H 0.117 0.883 33 H 0.083 0.917 34 H 0.254 0.746 35 H 0.180 0.820 36 H 0.142 0.858 37 H 0.157 0.843 38 H 0.150 0.850 39 H 0.113 0.887 40 H 0.246 0.754 41 H -0.215 1.215 42 H -0.223 1.223 43 H 0.163 0.837 44 H 0.175 0.825 45 H 0.101 0.899 46 H 0.120 0.880 47 H 0.160 0.840 48 H 0.157 0.843 49 H 0.158 0.842 50 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -6.325 -0.858 -0.953 6.454 hybrid contribution 0.402 -0.783 0.424 0.977 sum -5.923 -1.640 -0.530 6.169 Atomic orbital electron populations 1.23279 0.76919 1.05364 1.01896 1.86016 1.22863 1.26785 1.88701 1.19092 0.92261 0.84723 0.97166 1.19247 0.90317 0.95980 1.06122 1.21372 0.93622 0.95428 0.97024 0.88147 1.23606 0.95362 1.01388 0.97586 1.21819 0.99763 0.80043 0.97293 0.89523 1.45480 1.13979 1.07308 1.67833 1.18736 0.82999 0.88707 0.75988 1.90809 1.31622 1.72057 1.52768 1.22990 1.01549 0.91850 1.06562 1.22358 0.98550 0.91854 0.91054 1.19120 0.94824 0.92419 1.01859 1.21626 0.98500 0.94213 0.97649 1.21108 0.97773 0.94153 0.99541 1.19690 0.94574 0.94109 0.99132 1.25094 1.06902 0.92316 0.95602 1.86548 1.65629 1.25786 1.58936 0.94115 0.76576 0.78980 0.83146 1.21164 0.98352 0.94865 0.99892 1.21631 0.97830 0.93979 0.97805 1.23365 0.94260 1.02428 0.96110 1.21102 1.00826 0.90940 0.97597 1.21357 0.94170 0.99208 1.03409 1.21257 0.95158 0.97602 0.97115 1.21491 1.00910 0.92442 1.08743 0.92174 0.86528 0.92055 0.88292 0.91726 0.74608 0.81986 0.85783 0.84272 0.85026 0.88667 0.75448 1.21550 1.22302 0.83747 0.82492 0.89861 0.87987 0.84009 0.84332 0.84219 0.84243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.04 16 2 O -0.33 -0.86 9.43 -92.43 -0.87 -1.74 16 3 C 0.11 0.42 6.66 22.51 0.15 0.57 16 4 C -0.12 -0.31 5.30 -19.77 -0.10 -0.41 16 5 C -0.06 0.00 3.76 -10.92 -0.04 -0.04 16 6 H 0.10 0.04 7.32 -2.39 -0.02 0.02 16 7 C -0.14 -0.11 7.27 31.21 0.23 0.12 16 8 C 0.12 0.15 4.30 45.52 0.20 0.34 16 9 H 0.09 0.46 7.50 -2.39 -0.02 0.44 16 10 N -0.70 -0.13 5.26 -444.26 -2.34 -2.47 16 11 C 0.54 3.06 7.74 86.37 0.67 3.73 16 12 O -0.59 -8.70 15.85 -4.33 -0.07 -8.77 16 13 C -0.21 -0.05 9.41 23.62 0.22 0.17 16 14 C -0.02 -0.04 9.46 23.84 0.23 0.18 16 15 C -0.08 -0.13 5.87 -20.15 -0.12 -0.25 16 16 C -0.10 -0.21 9.80 22.57 0.22 0.01 16 17 C -0.11 -0.26 9.66 22.23 0.21 -0.05 16 18 C -0.07 -0.13 5.39 -19.79 -0.11 -0.24 16 19 C -0.09 0.09 2.79 71.23 0.20 0.29 16 20 O -0.56 -1.17 12.81 -148.98 -1.91 -3.08 16 21 Si 0.77 -2.23 29.83 68.60 2.05 -0.19 16 22 C -0.13 0.05 8.65 22.23 0.19 0.24 16 23 C -0.09 0.11 9.41 22.57 0.21 0.33 16 24 C -0.12 0.21 7.29 31.12 0.23 0.44 16 25 C -0.09 -0.09 8.61 22.25 0.19 0.10 16 26 C -0.16 -0.12 10.04 22.28 0.22 0.10 16 27 C -0.09 -0.08 10.04 22.25 0.22 0.14 16 28 C -0.22 -0.41 9.04 22.36 0.20 -0.21 16 29 H 0.06 -0.29 7.67 -2.39 -0.02 -0.31 16 30 H 0.12 -0.87 8.14 -2.39 -0.02 -0.89 16 31 H 0.06 -0.31 7.65 -2.39 -0.02 -0.33 16 32 H 0.10 -0.03 6.33 -2.39 -0.02 -0.05 16 33 H 0.06 0.18 8.14 -2.38 -0.02 0.17 16 34 H 0.42 -2.34 8.68 -92.70 -0.81 -3.15 16 35 H 0.16 -1.13 6.07 -2.91 -0.02 -1.15 16 36 H 0.12 0.60 7.52 -2.91 -0.02 0.58 16 37 H 0.14 -0.09 8.06 -2.91 -0.02 -0.11 16 38 H 0.13 0.11 8.06 -2.91 -0.02 0.09 16 39 H 0.10 -0.46 7.96 -2.39 -0.02 -0.48 16 40 H 0.40 -2.33 8.74 -74.06 -0.65 -2.98 16 41 H -0.29 -0.44 7.11 99.48 0.71 0.27 16 42 H -0.30 -1.13 7.04 99.48 0.70 -0.43 16 43 H 0.15 -0.61 4.84 -2.91 -0.01 -0.62 16 44 H 0.16 -1.12 6.17 -2.91 -0.02 -1.14 16 45 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 46 H 0.10 -0.24 7.72 -2.39 -0.02 -0.26 16 47 H 0.14 -0.33 6.67 -2.91 -0.02 -0.35 16 48 H 0.14 -0.41 8.06 -2.91 -0.02 -0.43 16 49 H 0.14 -0.44 8.06 -2.91 -0.02 -0.46 16 50 H 0.14 -0.25 6.30 -2.91 -0.02 -0.27 16 Total: 0.00 -22.70 411.44 0.97 -21.73 By element: Atomic # 1 Polarization: -11.67 SS G_CDS: -0.43 Total: -12.10 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: 4.54 Total: 6.62 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -2.34 Total: -2.47 kcal Atomic # 8 Polarization: -10.74 SS G_CDS: -2.85 Total: -13.59 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: 2.05 Total: -0.19 kcal Total: -22.70 0.97 -21.73 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12360594.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.565 kcal (2) G-P(sol) polarization free energy of solvation -22.697 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.163 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds