Wall clock time and date at job start Sun Mar 7 2021 05:06:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35901 * 117.00336 * 2 1 4 4 C 1.38705 * 120.05857 * 180.02562 * 3 2 1 5 5 C 1.50704 * 120.02641 * 359.97438 * 4 3 2 6 6 H 1.09005 * 112.85228 * 348.81104 * 5 4 3 7 7 C 1.53781 * 113.61056 * 120.00157 * 5 4 3 8 8 C 1.53778 * 87.08078 * 139.98410 * 7 5 4 9 9 H 1.09001 * 113.61711 * 220.01630 * 8 7 5 10 10 N 1.46500 * 113.61556 * 89.19786 * 8 7 5 11 11 C 1.34783 * 119.99897 * 155.00059 * 10 8 7 12 12 O 1.21573 * 120.00171 * 0.02562 * 11 10 8 13 13 C 1.47693 * 119.99929 * 180.02562 * 11 10 8 14 14 C 1.39813 * 120.15465 * 179.72458 * 13 11 10 15 15 F 1.35091 * 120.08157 * 359.97438 * 14 13 11 16 16 C 1.38306 * 119.82788 * 179.74553 * 14 13 11 17 17 C 1.38191 * 120.14906 * 0.53152 * 16 14 13 18 18 C 1.50703 * 119.84293 * 179.72152 * 17 16 14 19 19 O 1.42901 * 109.46747 * 255.02290 * 18 17 16 20 20 Si 1.86302 * 109.47264 * 15.02094 * 18 17 16 21 21 C 1.38654 * 120.31146 * 359.74377 * 17 16 14 22 22 F 1.35105 * 119.91348 * 180.02562 * 21 17 16 23 23 C 1.38067 * 120.16951 * 359.97438 * 21 17 16 24 24 C 1.53778 * 113.61701 * 217.49911 * 5 4 3 25 25 C 1.38166 * 119.94676 * 180.02562 * 4 3 2 26 26 C 1.38242 * 120.05324 * 359.97438 * 25 4 3 27 27 C 1.38289 * 120.11360 * 359.97438 * 26 25 4 28 28 C 1.38127 * 120.05463 * 359.76790 * 27 26 25 29 29 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46938 * 59.99705 * 1 2 3 31 31 H 1.09004 * 109.46926 * 299.99826 * 1 2 3 32 32 H 1.09000 * 113.61604 * 254.52973 * 7 5 4 33 33 H 1.08995 * 113.61745 * 25.43742 * 7 5 4 34 34 H 0.97000 * 120.00042 * 335.00310 * 10 8 7 35 35 H 1.08002 * 119.92562 * 180.27059 * 16 14 13 36 36 H 1.08994 * 109.47137 * 135.02406 * 18 17 16 37 37 H 0.96698 * 114.00267 * 60.00373 * 19 18 17 38 38 H 1.48499 * 109.99971 * 180.02562 * 20 18 17 39 39 H 1.48500 * 109.99708 * 301.31827 * 20 18 17 40 40 H 1.07992 * 120.07739 * 180.02562 * 23 21 17 41 41 H 1.09001 * 113.61085 * 334.57232 * 24 5 4 42 42 H 1.08997 * 113.61538 * 105.47265 * 24 5 4 43 43 H 1.08001 * 119.96855 * 179.97438 * 25 4 3 44 44 H 1.08005 * 119.94303 * 180.02562 * 26 25 4 45 45 H 1.08000 * 119.97132 * 180.02562 * 27 26 25 46 46 H 1.07996 * 120.02866 * 180.27865 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4312 1.2848 -0.0005 5 6 4.2538 0.0220 -0.0005 6 1 3.6592 -0.8705 0.1948 7 6 5.1798 -0.1098 -1.2211 8 6 6.2405 -0.6676 -0.2575 9 1 7.2495 -0.3112 -0.4648 10 7 6.1741 -2.1215 -0.0896 11 6 7.2733 -2.8079 0.2808 12 8 8.3197 -2.2206 0.4760 13 6 7.2065 -4.2737 0.4496 14 6 8.3462 -4.9897 0.8281 15 9 9.5129 -4.3427 1.0403 16 6 8.2747 -6.3615 0.9893 17 6 7.0834 -7.0254 0.7664 18 6 7.0149 -8.5211 0.9380 19 8 6.9785 -9.1466 -0.3463 20 14 8.5158 -9.1083 1.8725 21 6 5.9509 -6.3220 0.3853 22 9 4.7903 -6.9791 0.1701 23 6 6.0061 -4.9516 0.2262 24 6 5.5270 0.1162 0.8567 25 6 4.0561 2.5170 0.0000 26 6 3.3021 3.6757 0.0005 27 6 1.9210 3.6047 0.0000 28 6 1.2915 2.3753 -0.0059 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 0.5138 0.8900 32 1 4.8328 -0.8359 -1.9562 33 1 5.4543 0.8465 -1.6663 34 1 5.3391 -2.5900 -0.2450 35 1 9.1530 -6.9156 1.2859 36 1 6.1151 -8.7820 1.4949 37 1 7.7500 -8.9577 -0.8978 38 1 8.4605 -10.5819 2.0477 39 1 9.7506 -8.7305 1.1391 40 1 5.1231 -4.4052 -0.0703 41 1 5.8962 1.1344 0.9796 42 1 5.4601 -0.4275 1.7990 43 1 5.1345 2.5750 0.0000 44 1 3.7924 4.6380 0.0005 45 1 1.3341 4.5114 0.0000 46 1 0.2129 2.3203 -0.0109 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12360598.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:28 Heat of formation + Delta-G solvation = -97.017986 kcal Electronic energy + Delta-G solvation = -33623.016288 eV Core-core repulsion = 28696.122137 eV Total energy + Delta-G solvation = -4926.894151 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -50.11785 -50.10396 -41.88274 -41.16077 -40.20907 -39.29032 -38.05337 -37.75758 -34.93805 -33.27276 -31.73259 -31.39168 -31.04308 -28.23373 -27.91756 -26.69710 -26.13418 -24.42279 -24.07013 -23.08042 -22.58964 -22.01762 -20.25285 -19.73870 -19.08725 -18.81494 -18.54527 -17.98604 -17.48237 -17.30285 -17.04572 -16.78517 -16.67726 -16.64245 -16.55095 -16.24039 -15.99616 -15.88433 -15.68160 -15.40106 -15.35369 -15.11659 -14.98450 -14.60695 -14.31166 -14.16290 -14.00527 -13.82862 -13.48718 -13.22716 -13.17003 -12.99173 -12.96672 -12.75850 -12.42153 -12.29103 -12.01864 -11.92863 -11.76986 -11.65817 -11.26764 -11.16954 -10.78931 -10.61601 -10.20869 -9.83771 -9.75414 -9.06793 -4.95829 -0.82955 -0.32111 0.35112 0.49439 1.15704 1.36337 1.54141 1.80349 1.91261 2.21676 2.38510 2.76709 2.77530 2.83093 3.09456 3.23541 3.41904 3.47374 3.49694 3.66724 3.70014 3.77372 3.92293 3.99792 4.09786 4.16499 4.20056 4.31017 4.32690 4.37003 4.37583 4.46294 4.48947 4.51746 4.63872 4.68072 4.70146 4.72471 4.74065 4.79294 4.83497 4.93056 5.01381 5.10652 5.14360 5.36405 5.41127 5.43598 5.59418 5.65476 5.86159 6.28536 6.38680 6.44594 6.96370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.329 6.329 3 C 0.112 3.888 4 C -0.116 4.116 5 C -0.058 4.058 6 H 0.101 0.899 7 C -0.124 4.124 8 C 0.117 3.883 9 H 0.094 0.906 10 N -0.691 5.691 11 C 0.561 3.439 12 O -0.558 6.558 13 C -0.147 4.147 14 C 0.142 3.858 15 F -0.124 7.124 16 C -0.130 4.130 17 C -0.090 4.090 18 C -0.087 4.087 19 O -0.540 6.540 20 Si 0.773 3.227 21 C 0.104 3.896 22 F -0.127 7.127 23 C -0.078 4.078 24 C -0.140 4.140 25 C -0.086 4.086 26 C -0.163 4.163 27 C -0.094 4.094 28 C -0.218 4.218 29 H 0.116 0.884 30 H 0.061 0.939 31 H 0.060 0.940 32 H 0.083 0.917 33 H 0.105 0.895 34 H 0.414 0.586 35 H 0.172 0.828 36 H 0.133 0.867 37 H 0.390 0.610 38 H -0.294 1.294 39 H -0.270 1.270 40 H 0.177 0.823 41 H 0.102 0.898 42 H 0.067 0.933 43 H 0.144 0.856 44 H 0.139 0.861 45 H 0.139 0.861 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.668 0.906 0.662 4.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.243 6.243 3 C 0.067 3.933 4 C -0.117 4.117 5 C -0.076 4.076 6 H 0.119 0.881 7 C -0.162 4.162 8 C 0.012 3.988 9 H 0.112 0.888 10 N -0.343 5.343 11 C 0.348 3.652 12 O -0.437 6.437 13 C -0.151 4.151 14 C 0.121 3.879 15 F -0.102 7.102 16 C -0.148 4.148 17 C -0.091 4.091 18 C -0.196 4.196 19 O -0.348 6.348 20 Si 0.676 3.324 21 C 0.085 3.915 22 F -0.106 7.106 23 C -0.097 4.097 24 C -0.179 4.179 25 C -0.104 4.104 26 C -0.182 4.182 27 C -0.112 4.112 28 C -0.236 4.236 29 H 0.134 0.866 30 H 0.079 0.921 31 H 0.078 0.922 32 H 0.102 0.898 33 H 0.123 0.877 34 H 0.253 0.747 35 H 0.189 0.811 36 H 0.150 0.850 37 H 0.240 0.760 38 H -0.221 1.221 39 H -0.196 1.196 40 H 0.195 0.805 41 H 0.120 0.880 42 H 0.085 0.915 43 H 0.162 0.838 44 H 0.157 0.843 45 H 0.157 0.843 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -3.731 0.429 0.990 3.884 hybrid contribution -0.672 0.064 -1.240 1.412 sum -4.404 0.493 -0.251 4.439 Atomic orbital electron populations 1.23274 0.76970 1.05317 1.01889 1.86011 1.22800 1.26794 1.88707 1.19097 0.92307 0.84692 0.97177 1.19237 0.90256 0.95999 1.06162 1.21356 0.93712 0.95464 0.97117 0.88121 1.23393 0.94095 1.02600 0.96103 1.21899 1.00321 0.79040 0.97590 0.88816 1.45456 1.12454 1.07780 1.68574 1.18054 0.83883 0.86422 0.76837 1.90868 1.30810 1.70755 1.51280 1.19800 0.94007 0.93593 1.07730 1.17778 0.81281 0.90386 0.98474 1.91603 1.45353 1.81733 1.91479 1.21107 0.99513 0.91811 1.02353 1.20451 0.91824 0.97910 0.98940 1.25319 1.15518 0.87779 0.90945 1.86655 1.48312 1.73033 1.26818 0.93823 0.72696 0.79050 0.86795 1.17339 0.82240 0.89892 1.02065 1.91574 1.45867 1.81012 1.92130 1.21329 0.97999 0.92502 0.97869 1.23574 0.95135 1.01545 0.97612 1.21107 1.00878 0.90873 0.97519 1.21360 0.94137 0.99266 1.03389 1.21257 0.95205 0.97575 0.97125 1.21491 1.00888 0.92482 1.08765 0.86598 0.92076 0.92182 0.89790 0.87707 0.74734 0.81066 0.84973 0.76014 1.22125 1.19601 0.80527 0.87965 0.91463 0.83838 0.84341 0.84304 0.84338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.65 9.43 -92.43 -0.87 -1.52 16 3 C 0.11 0.34 6.66 22.51 0.15 0.49 16 4 C -0.12 -0.18 5.30 -19.77 -0.10 -0.29 16 5 C -0.06 0.08 3.75 -11.01 -0.04 0.04 16 6 H 0.10 -0.12 7.33 -2.38 -0.02 -0.14 16 7 C -0.12 0.42 7.29 31.12 0.23 0.64 16 8 C 0.12 -0.07 4.32 45.52 0.20 0.12 16 9 H 0.09 0.28 7.46 -2.39 -0.02 0.26 16 10 N -0.69 0.84 5.22 -443.04 -2.31 -1.47 16 11 C 0.56 2.80 7.77 86.74 0.67 3.48 16 12 O -0.56 -7.69 14.94 -3.95 -0.06 -7.75 16 13 C -0.15 -0.20 5.88 -20.06 -0.12 -0.32 16 14 C 0.14 0.41 7.28 22.67 0.17 0.58 16 15 F -0.12 -1.09 15.55 44.97 0.70 -0.39 16 16 C -0.13 0.28 8.62 22.27 0.19 0.48 16 17 C -0.09 0.24 5.27 -19.78 -0.10 0.13 16 18 C -0.09 0.28 2.44 71.24 0.17 0.45 16 19 O -0.54 -0.04 12.88 -148.98 -1.92 -1.96 16 20 Si 0.77 -3.76 30.24 68.60 2.07 -1.69 16 21 C 0.10 -0.17 7.23 22.33 0.16 -0.01 16 22 F -0.13 -0.14 16.73 44.97 0.75 0.61 16 23 C -0.08 0.28 9.52 22.57 0.21 0.49 16 24 C -0.14 0.15 7.26 31.12 0.23 0.38 16 25 C -0.09 0.00 8.61 22.25 0.19 0.19 16 26 C -0.16 0.00 10.04 22.28 0.22 0.22 16 27 C -0.09 -0.04 10.04 22.26 0.22 0.18 16 28 C -0.22 -0.31 9.04 22.37 0.20 -0.11 16 29 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 30 H 0.06 -0.32 7.65 -2.39 -0.02 -0.34 16 31 H 0.06 -0.30 7.68 -2.38 -0.02 -0.32 16 32 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 33 H 0.10 -0.42 7.72 -2.39 -0.02 -0.44 16 34 H 0.41 -2.85 6.74 -92.71 -0.62 -3.47 16 35 H 0.17 -0.93 4.83 -2.91 -0.01 -0.94 16 36 H 0.13 -0.56 7.89 -2.39 -0.02 -0.58 16 37 H 0.39 -2.44 8.70 -74.06 -0.64 -3.09 16 38 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 39 H -0.27 0.60 6.68 99.48 0.66 1.26 16 40 H 0.18 -1.69 6.40 -2.91 -0.02 -1.71 16 41 H 0.10 -0.23 6.31 -2.39 -0.02 -0.24 16 42 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 43 H 0.14 -0.53 6.66 -2.91 -0.02 -0.55 16 44 H 0.14 -0.49 8.06 -2.91 -0.02 -0.52 16 45 H 0.14 -0.48 8.06 -2.91 -0.02 -0.50 16 46 H 0.14 -0.28 6.30 -2.91 -0.02 -0.30 16 Total: 0.00 -21.11 387.10 2.13 -18.98 By element: Atomic # 1 Polarization: -12.81 SS G_CDS: -0.20 Total: -13.01 kcal Atomic # 6 Polarization: 4.23 SS G_CDS: 3.97 Total: 8.20 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -2.31 Total: -1.47 kcal Atomic # 8 Polarization: -8.38 SS G_CDS: -2.85 Total: -11.23 kcal Atomic # 9 Polarization: -1.23 SS G_CDS: 1.45 Total: 0.22 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.07 Total: -1.69 kcal Total: -21.11 2.13 -18.98 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12360598.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.040 kcal (2) G-P(sol) polarization free energy of solvation -21.112 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.152 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.978 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds