Wall clock time and date at job start Sun Mar 7 2021 05:06:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35903 * 116.99851 * 2 1 4 4 C 1.38704 * 120.05528 * 179.97438 * 3 2 1 5 5 C 1.50707 * 120.02890 * 0.02562 * 4 3 2 6 6 H 1.08999 * 112.84690 * 10.91992 * 5 4 3 7 7 C 1.53781 * 113.68949 * 142.18451 * 5 4 3 8 8 C 1.53786 * 87.08035 * 139.99394 * 7 5 4 9 9 H 1.08991 * 113.69058 * 220.00992 * 8 7 5 10 10 N 1.46499 * 113.61180 * 89.11191 * 8 7 5 11 11 C 1.34779 * 119.99758 * 107.50745 * 10 8 7 12 12 O 1.21575 * 119.99793 * 359.97438 * 11 10 8 13 13 C 1.47717 * 120.00098 * 180.02562 * 11 10 8 14 14 C 1.39634 * 120.11736 * 180.02562 * 13 11 10 15 15 C 1.37861 * 119.87652 * 179.97438 * 14 13 11 16 16 C 1.50709 * 119.93857 * 180.02562 * 15 14 13 17 17 O 1.42902 * 109.46723 * 254.98388 * 16 15 14 18 18 Si 1.86295 * 109.47202 * 134.98083 * 16 15 14 19 19 C 1.38628 * 120.11975 * 0.02562 * 15 14 13 20 20 F 1.35100 * 119.87710 * 180.27381 * 19 15 14 21 21 C 1.38675 * 120.24072 * 0.02562 * 19 15 14 22 22 C 1.37814 * 120.11677 * 359.97422 * 21 19 15 23 23 C 1.53777 * 113.61731 * 239.72166 * 5 4 3 24 24 C 1.38167 * 119.94542 * 179.72794 * 4 3 2 25 25 C 1.38239 * 120.05332 * 0.22863 * 24 4 3 26 26 C 1.38285 * 120.11321 * 0.03037 * 25 24 4 27 27 C 1.38123 * 120.05608 * 359.97217 * 26 25 24 28 28 H 1.08999 * 109.46943 * 299.99870 * 1 2 3 29 29 H 1.09000 * 109.46776 * 59.99872 * 1 2 3 30 30 H 1.08997 * 109.47020 * 179.97438 * 1 2 3 31 31 H 1.08996 * 113.61536 * 25.44514 * 7 5 4 32 32 H 1.08997 * 113.61405 * 254.54270 * 7 5 4 33 33 H 0.96998 * 120.00388 * 287.50411 * 10 8 7 34 34 H 1.08003 * 120.06087 * 359.95742 * 14 13 11 35 35 H 1.09003 * 109.46507 * 14.97534 * 16 15 14 36 36 H 0.96698 * 113.99622 * 299.99126 * 17 16 15 37 37 H 1.48498 * 109.99862 * 180.02562 * 18 16 15 38 38 H 1.48499 * 109.99747 * 301.32083 * 18 16 15 39 39 H 1.08006 * 119.93830 * 179.97438 * 21 19 15 40 40 H 1.08001 * 120.05656 * 180.02562 * 22 21 19 41 41 H 1.08998 * 113.61832 * 105.38342 * 23 5 4 42 42 H 1.09005 * 113.68971 * 334.49723 * 23 5 4 43 43 H 1.08000 * 119.97340 * 180.25911 * 24 4 3 44 44 H 1.08004 * 119.94494 * 180.02562 * 25 24 4 45 45 H 1.08006 * 119.97428 * 179.97438 * 26 25 24 46 46 H 1.08003 * 120.03009 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4310 1.2849 0.0005 5 6 4.2537 0.0222 0.0005 6 1 3.6585 -0.8708 -0.1902 7 6 5.5234 0.1120 -0.8624 8 6 6.2408 -0.6688 0.2515 9 1 7.2512 -0.3138 0.4543 10 7 6.1708 -2.1229 0.0874 11 6 7.2672 -2.8125 -0.2853 12 8 8.3141 -2.2278 -0.4857 13 6 7.1965 -4.2787 -0.4513 14 6 8.3310 -4.9956 -0.8368 15 6 8.2596 -6.3638 -0.9898 16 6 9.4834 -7.1391 -1.4053 17 8 9.3609 -7.5237 -2.7761 18 14 9.6433 -8.6623 -0.3447 19 6 7.0642 -7.0278 -0.7622 20 9 7.0012 -8.3694 -0.9081 21 6 5.9342 -6.3205 -0.3802 22 6 5.9945 -4.9526 -0.2243 23 6 5.1848 -0.1065 1.2176 24 6 4.0559 2.5172 -0.0051 25 6 3.3018 3.6758 -0.0066 26 6 1.9208 3.6048 -0.0017 27 6 1.2914 2.3753 0.0040 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 5.8933 1.1293 -0.9903 32 1 5.4520 -0.4348 -1.8025 33 1 5.3355 -2.5894 0.2470 34 1 9.2627 -4.4792 -1.0151 35 1 10.3684 -6.5150 -1.2808 36 1 8.5932 -8.0820 -2.9608 37 1 10.8467 -9.4352 -0.7441 38 1 9.7394 -8.2770 1.0862 39 1 5.0053 -6.8428 -0.2045 40 1 5.1139 -4.4028 0.0736 41 1 4.8400 -0.8297 1.9567 42 1 5.4628 0.8504 1.6595 43 1 5.1343 2.5753 -0.0090 44 1 3.7921 4.6381 -0.0115 45 1 1.3339 4.5114 -0.0024 46 1 0.2128 2.3203 0.0074 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:38 Heat of formation + Delta-G solvation = -61.747840 kcal Electronic energy + Delta-G solvation = -30823.790172 eV Core-core repulsion = 26367.879425 eV Total energy + Delta-G solvation = -4455.910747 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -50.47584 -41.89137 -41.20953 -40.15705 -39.09431 -38.07801 -37.64599 -34.79058 -32.96952 -32.27033 -31.46957 -31.09782 -28.30650 -27.06620 -26.75931 -26.44184 -24.90658 -23.60347 -23.15488 -22.61493 -21.61606 -20.22365 -19.32961 -19.08813 -18.72850 -17.86625 -17.85796 -17.42539 -17.10678 -16.94874 -16.74214 -16.65104 -16.25174 -15.99701 -15.62986 -15.49389 -15.42430 -15.17313 -15.12623 -14.84207 -14.51270 -14.36815 -14.14166 -14.07054 -13.98131 -13.59953 -13.45441 -13.17301 -13.09396 -12.93270 -12.84758 -12.37373 -12.34576 -12.11876 -11.93327 -11.79364 -11.71178 -11.20432 -11.09435 -10.66989 -10.23376 -10.15118 -9.91330 -9.78313 -9.09409 -4.83079 -0.58038 -0.08823 0.32235 0.47654 1.21664 1.54963 1.68158 1.92881 2.00086 2.27558 2.51414 2.73915 2.82713 3.21181 3.39942 3.44831 3.47460 3.51491 3.61655 3.67822 3.80094 3.84460 3.93175 4.01286 4.02465 4.11937 4.15648 4.16602 4.23617 4.38514 4.41052 4.49412 4.50654 4.60386 4.65414 4.66422 4.70029 4.74056 4.78730 4.88304 4.90746 4.97360 5.00888 5.04671 5.12112 5.37171 5.41613 5.48677 5.56159 5.62512 5.79514 6.36620 6.38810 6.45020 7.10152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.102 0.898 7 C -0.144 4.144 8 C 0.119 3.881 9 H 0.107 0.893 10 N -0.707 5.707 11 C 0.564 3.436 12 O -0.528 6.528 13 C -0.142 4.142 14 C -0.013 4.013 15 C -0.154 4.154 16 C -0.069 4.069 17 O -0.533 6.533 18 Si 0.672 3.328 19 C 0.122 3.878 20 F -0.106 7.106 21 C -0.149 4.149 22 C -0.056 4.056 23 C -0.135 4.135 24 C -0.080 4.080 25 C -0.154 4.154 26 C -0.083 4.083 27 C -0.207 4.207 28 H 0.056 0.944 29 H 0.055 0.945 30 H 0.101 0.899 31 H 0.096 0.904 32 H 0.074 0.926 33 H 0.401 0.599 34 H 0.149 0.851 35 H 0.120 0.880 36 H 0.378 0.622 37 H -0.247 1.247 38 H -0.253 1.253 39 H 0.150 0.850 40 H 0.139 0.861 41 H 0.076 0.924 42 H 0.099 0.901 43 H 0.130 0.870 44 H 0.125 0.875 45 H 0.125 0.875 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.334 -0.021 1.648 7.517 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.183 4.183 8 C 0.014 3.986 9 H 0.125 0.875 10 N -0.359 5.359 11 C 0.351 3.649 12 O -0.405 6.405 13 C -0.145 4.145 14 C -0.032 4.032 15 C -0.155 4.155 16 C -0.179 4.179 17 O -0.338 6.338 18 Si 0.573 3.427 19 C 0.103 3.897 20 F -0.085 7.085 21 C -0.168 4.168 22 C -0.075 4.075 23 C -0.173 4.173 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.101 4.101 27 C -0.226 4.226 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.119 0.881 31 H 0.114 0.886 32 H 0.093 0.907 33 H 0.237 0.763 34 H 0.166 0.834 35 H 0.138 0.862 36 H 0.225 0.775 37 H -0.171 1.171 38 H -0.178 1.178 39 H 0.168 0.832 40 H 0.157 0.843 41 H 0.095 0.905 42 H 0.117 0.883 43 H 0.148 0.852 44 H 0.143 0.857 45 H 0.143 0.857 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -5.452 0.075 2.034 5.820 hybrid contribution -0.878 0.490 -0.075 1.008 sum -6.330 0.565 1.959 6.650 Atomic orbital electron populations 1.23081 0.78200 1.04127 1.01449 1.86038 1.21425 1.26808 1.88649 1.18853 0.91795 0.84267 0.96625 1.19021 0.90105 0.95331 1.05954 1.21404 0.93996 0.95903 0.96848 0.88006 1.23591 0.95163 1.01406 0.98131 1.21883 1.00648 0.79337 0.96730 0.87455 1.45564 1.12835 1.07547 1.69936 1.18104 0.83664 0.86511 0.76613 1.90822 1.29409 1.70476 1.49793 1.19998 0.95018 0.93456 1.06072 1.21059 0.98684 0.91519 0.91928 1.20361 0.95375 0.95231 1.04576 1.25029 0.96461 1.06272 0.90161 1.86563 1.51425 1.72339 1.23480 0.94611 0.87718 0.82410 0.78007 1.17767 0.94629 0.77100 1.00236 1.91180 1.94787 1.29542 1.92978 1.21083 0.98248 0.94561 1.02859 1.21199 0.96925 0.93713 0.95646 1.23440 0.95236 1.02260 0.96404 1.20883 1.00064 0.91018 0.97827 1.21087 0.93940 0.98535 1.03636 1.20983 0.94792 0.97061 0.97293 1.21267 1.00128 0.92431 1.08731 0.92579 0.92596 0.88086 0.88590 0.90680 0.76303 0.83365 0.86211 0.77484 1.17126 1.17751 0.83219 0.84302 0.90530 0.88298 0.85210 0.85740 0.85750 0.85461 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.23 9.43 -19.44 -0.18 -0.42 16 3 C 0.13 0.17 6.66 -39.22 -0.26 -0.09 16 4 C -0.10 -0.07 5.30 -104.47 -0.55 -0.63 16 5 C -0.06 0.05 3.75 -90.96 -0.34 -0.29 16 6 H 0.10 -0.07 7.32 -51.93 -0.38 -0.45 16 7 C -0.14 0.09 7.26 -25.92 -0.19 -0.10 16 8 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 9 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 10 N -0.71 0.57 5.21 -54.00 -0.28 0.29 16 11 C 0.56 1.07 7.77 -12.39 -0.10 0.97 16 12 O -0.53 -3.04 15.94 5.30 0.08 -2.95 16 13 C -0.14 -0.05 5.87 -104.97 -0.62 -0.67 16 14 C -0.01 -0.02 9.21 -39.20 -0.36 -0.38 16 15 C -0.15 -0.05 4.78 -104.61 -0.50 -0.55 16 16 C -0.07 -0.04 2.81 36.01 0.10 0.06 16 17 O -0.53 -0.65 12.88 -35.23 -0.45 -1.10 16 18 Si 0.67 0.28 29.57 -169.99 -5.03 -4.75 16 19 C 0.12 -0.12 6.63 -39.28 -0.26 -0.38 16 20 F -0.11 0.19 13.46 2.25 0.03 0.22 16 21 C -0.15 0.35 10.01 -39.58 -0.40 -0.04 16 22 C -0.06 0.13 9.54 -39.20 -0.37 -0.24 16 23 C -0.14 0.22 7.29 -25.92 -0.19 0.03 16 24 C -0.08 0.00 8.61 -39.61 -0.34 -0.35 16 25 C -0.15 -0.02 10.04 -39.56 -0.40 -0.41 16 26 C -0.08 -0.02 10.04 -39.61 -0.40 -0.42 16 27 C -0.21 -0.12 9.04 -39.43 -0.36 -0.48 16 28 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 29 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 30 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 31 H 0.10 -0.11 6.32 -51.93 -0.33 -0.44 16 32 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 33 H 0.40 -1.35 6.73 -40.82 -0.27 -1.62 16 34 H 0.15 0.24 7.59 -52.48 -0.40 -0.16 16 35 H 0.12 0.07 7.77 -51.93 -0.40 -0.33 16 36 H 0.38 -0.89 8.42 45.56 0.38 -0.50 16 37 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 38 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 39 H 0.15 -0.70 8.06 -52.48 -0.42 -1.12 16 40 H 0.14 -0.73 6.40 -52.49 -0.34 -1.06 16 41 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.10 -0.18 7.73 -51.93 -0.40 -0.58 16 43 H 0.13 -0.21 6.67 -52.49 -0.35 -0.56 16 44 H 0.12 -0.19 8.06 -52.48 -0.42 -0.61 16 45 H 0.12 -0.19 8.06 -52.48 -0.42 -0.62 16 46 H 0.13 -0.14 6.30 -52.48 -0.33 -0.47 16 LS Contribution 382.06 15.07 5.76 5.76 Total: 0.00 -8.08 382.06 -10.64 -18.71 By element: Atomic # 1 Polarization: -6.64 SS G_CDS: -5.74 Total: -12.38 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -4.83 Total: -3.38 kcal Atomic # 7 Polarization: 0.57 SS G_CDS: -0.28 Total: 0.29 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -0.55 Total: -4.47 kcal Atomic # 9 Polarization: 0.19 SS G_CDS: 0.03 Total: 0.22 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.03 Total: -4.75 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -8.08 -10.64 -18.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.036 kcal (2) G-P(sol) polarization free energy of solvation -8.077 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds