Wall clock time and date at job start Sun Mar 7 2021 05:06:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35903 * 116.99851 * 2 1 4 4 C 1.38704 * 120.05528 * 179.97438 * 3 2 1 5 5 C 1.50707 * 120.02890 * 0.02562 * 4 3 2 6 6 H 1.08999 * 112.84690 * 10.91992 * 5 4 3 7 7 C 1.53781 * 113.68949 * 142.18451 * 5 4 3 8 8 C 1.53786 * 87.08035 * 139.99394 * 7 5 4 9 9 H 1.08991 * 113.69058 * 220.00992 * 8 7 5 10 10 N 1.46499 * 113.61180 * 89.11191 * 8 7 5 11 11 C 1.34779 * 119.99758 * 107.50745 * 10 8 7 12 12 O 1.21575 * 119.99793 * 359.97438 * 11 10 8 13 13 C 1.47717 * 120.00098 * 180.02562 * 11 10 8 14 14 C 1.39634 * 120.11736 * 180.02562 * 13 11 10 15 15 C 1.37861 * 119.87652 * 179.97438 * 14 13 11 16 16 C 1.50709 * 119.93857 * 180.02562 * 15 14 13 17 17 O 1.42902 * 109.46723 * 254.98388 * 16 15 14 18 18 Si 1.86295 * 109.47202 * 134.98083 * 16 15 14 19 19 C 1.38628 * 120.11975 * 0.02562 * 15 14 13 20 20 F 1.35100 * 119.87710 * 180.27381 * 19 15 14 21 21 C 1.38675 * 120.24072 * 0.02562 * 19 15 14 22 22 C 1.37814 * 120.11677 * 359.97422 * 21 19 15 23 23 C 1.53777 * 113.61731 * 239.72166 * 5 4 3 24 24 C 1.38167 * 119.94542 * 179.72794 * 4 3 2 25 25 C 1.38239 * 120.05332 * 0.22863 * 24 4 3 26 26 C 1.38285 * 120.11321 * 0.03037 * 25 24 4 27 27 C 1.38123 * 120.05608 * 359.97217 * 26 25 24 28 28 H 1.08999 * 109.46943 * 299.99870 * 1 2 3 29 29 H 1.09000 * 109.46776 * 59.99872 * 1 2 3 30 30 H 1.08997 * 109.47020 * 179.97438 * 1 2 3 31 31 H 1.08996 * 113.61536 * 25.44514 * 7 5 4 32 32 H 1.08997 * 113.61405 * 254.54270 * 7 5 4 33 33 H 0.96998 * 120.00388 * 287.50411 * 10 8 7 34 34 H 1.08003 * 120.06087 * 359.95742 * 14 13 11 35 35 H 1.09003 * 109.46507 * 14.97534 * 16 15 14 36 36 H 0.96698 * 113.99622 * 299.99126 * 17 16 15 37 37 H 1.48498 * 109.99862 * 180.02562 * 18 16 15 38 38 H 1.48499 * 109.99747 * 301.32083 * 18 16 15 39 39 H 1.08006 * 119.93830 * 179.97438 * 21 19 15 40 40 H 1.08001 * 120.05656 * 180.02562 * 22 21 19 41 41 H 1.08998 * 113.61832 * 105.38342 * 23 5 4 42 42 H 1.09005 * 113.68971 * 334.49723 * 23 5 4 43 43 H 1.08000 * 119.97340 * 180.25911 * 24 4 3 44 44 H 1.08004 * 119.94494 * 180.02562 * 25 24 4 45 45 H 1.08006 * 119.97428 * 179.97438 * 26 25 24 46 46 H 1.08003 * 120.03009 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4310 1.2849 0.0005 5 6 4.2537 0.0222 0.0005 6 1 3.6585 -0.8708 -0.1902 7 6 5.5234 0.1120 -0.8624 8 6 6.2408 -0.6688 0.2515 9 1 7.2512 -0.3138 0.4543 10 7 6.1708 -2.1229 0.0874 11 6 7.2672 -2.8125 -0.2853 12 8 8.3141 -2.2278 -0.4857 13 6 7.1965 -4.2787 -0.4513 14 6 8.3310 -4.9956 -0.8368 15 6 8.2596 -6.3638 -0.9898 16 6 9.4834 -7.1391 -1.4053 17 8 9.3609 -7.5237 -2.7761 18 14 9.6433 -8.6623 -0.3447 19 6 7.0642 -7.0278 -0.7622 20 9 7.0012 -8.3694 -0.9081 21 6 5.9342 -6.3205 -0.3802 22 6 5.9945 -4.9526 -0.2243 23 6 5.1848 -0.1065 1.2176 24 6 4.0559 2.5172 -0.0051 25 6 3.3018 3.6758 -0.0066 26 6 1.9208 3.6048 -0.0017 27 6 1.2914 2.3753 0.0040 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 5.8933 1.1293 -0.9903 32 1 5.4520 -0.4348 -1.8025 33 1 5.3355 -2.5894 0.2470 34 1 9.2627 -4.4792 -1.0151 35 1 10.3684 -6.5150 -1.2808 36 1 8.5932 -8.0820 -2.9608 37 1 10.8467 -9.4352 -0.7441 38 1 9.7394 -8.2770 1.0862 39 1 5.0053 -6.8428 -0.2045 40 1 5.1139 -4.4028 0.0736 41 1 4.8400 -0.8297 1.9567 42 1 5.4628 0.8504 1.6595 43 1 5.1343 2.5753 -0.0090 44 1 3.7921 4.6381 -0.0115 45 1 1.3339 4.5114 -0.0024 46 1 0.2128 2.3203 0.0074 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:36 Heat of formation + Delta-G solvation = -58.530786 kcal Electronic energy + Delta-G solvation = -30823.650670 eV Core-core repulsion = 26367.879425 eV Total energy + Delta-G solvation = -4455.771246 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -50.36034 -41.88834 -41.19439 -40.11112 -39.14512 -38.03684 -37.68920 -34.85786 -32.92129 -32.22429 -31.42255 -31.04134 -28.14789 -27.06468 -26.69420 -26.41156 -24.88872 -23.54088 -23.10116 -22.58403 -21.64894 -20.19850 -19.30640 -19.02121 -18.65987 -17.89935 -17.82146 -17.37229 -17.01768 -16.93853 -16.65020 -16.61590 -16.26223 -16.09387 -15.65517 -15.46053 -15.35312 -15.13049 -15.06629 -14.78199 -14.46074 -14.31030 -14.22459 -14.01690 -13.99932 -13.52230 -13.40514 -13.14898 -12.98824 -12.90929 -12.74640 -12.49260 -12.29233 -12.00940 -11.99427 -11.76504 -11.64936 -11.25151 -11.16508 -10.70033 -10.26312 -10.12886 -9.85840 -9.75167 -9.06529 -4.92274 -0.53728 -0.01127 0.35031 0.49471 1.14930 1.48803 1.58855 1.84749 1.95588 2.39220 2.52578 2.76689 2.91625 3.25258 3.46314 3.49502 3.54274 3.58664 3.67307 3.71860 3.92350 3.93781 4.00518 4.07266 4.11504 4.20037 4.25767 4.33788 4.38653 4.46534 4.49477 4.58730 4.64412 4.71009 4.73886 4.75287 4.79285 4.82938 4.86577 4.94506 4.98023 5.01395 5.06386 5.10744 5.16631 5.41168 5.44848 5.58194 5.60166 5.66299 5.86006 6.39187 6.45070 6.57563 7.06021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.328 6.328 3 C 0.114 3.886 4 C -0.116 4.116 5 C -0.056 4.056 6 H 0.103 0.897 7 C -0.142 4.142 8 C 0.116 3.884 9 H 0.090 0.910 10 N -0.692 5.692 11 C 0.561 3.439 12 O -0.578 6.578 13 C -0.155 4.155 14 C -0.031 4.031 15 C -0.165 4.165 16 C -0.074 4.074 17 O -0.549 6.549 18 Si 0.747 3.253 19 C 0.122 3.878 20 F -0.099 7.099 21 C -0.140 4.140 22 C -0.043 4.043 23 C -0.123 4.123 24 C -0.087 4.087 25 C -0.164 4.164 26 C -0.094 4.094 27 C -0.217 4.217 28 H 0.061 0.939 29 H 0.059 0.941 30 H 0.118 0.882 31 H 0.099 0.901 32 H 0.065 0.935 33 H 0.416 0.584 34 H 0.130 0.870 35 H 0.112 0.888 36 H 0.393 0.607 37 H -0.287 1.287 38 H -0.285 1.285 39 H 0.183 0.817 40 H 0.173 0.827 41 H 0.086 0.914 42 H 0.102 0.898 43 H 0.142 0.858 44 H 0.138 0.862 45 H 0.139 0.861 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.766 -0.452 2.108 10.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.242 6.242 3 C 0.069 3.931 4 C -0.117 4.117 5 C -0.074 4.074 6 H 0.121 0.879 7 C -0.180 4.180 8 C 0.011 3.989 9 H 0.108 0.892 10 N -0.343 5.343 11 C 0.350 3.650 12 O -0.458 6.458 13 C -0.158 4.158 14 C -0.051 4.051 15 C -0.166 4.166 16 C -0.184 4.184 17 O -0.357 6.357 18 Si 0.652 3.348 19 C 0.103 3.897 20 F -0.077 7.077 21 C -0.159 4.159 22 C -0.061 4.061 23 C -0.161 4.161 24 C -0.105 4.105 25 C -0.182 4.182 26 C -0.112 4.112 27 C -0.236 4.236 28 H 0.079 0.921 29 H 0.077 0.923 30 H 0.136 0.864 31 H 0.117 0.883 32 H 0.084 0.916 33 H 0.254 0.746 34 H 0.148 0.852 35 H 0.129 0.871 36 H 0.242 0.758 37 H -0.214 1.214 38 H -0.212 1.212 39 H 0.200 0.800 40 H 0.190 0.810 41 H 0.104 0.896 42 H 0.121 0.879 43 H 0.160 0.840 44 H 0.156 0.844 45 H 0.157 0.843 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -7.952 -0.361 2.489 8.340 hybrid contribution -0.144 0.633 -0.221 0.686 sum -8.097 0.272 2.268 8.413 Atomic orbital electron populations 1.23281 0.76932 1.05403 1.01853 1.86010 1.22820 1.26677 1.88681 1.19076 0.92243 0.84729 0.97093 1.19238 0.90312 0.95974 1.06147 1.21343 0.93603 0.95501 0.96978 0.87866 1.23575 0.95401 1.01443 0.97624 1.21871 1.00096 0.79464 0.97508 0.89231 1.45450 1.12792 1.07475 1.68624 1.18403 0.83443 0.87232 0.75950 1.90794 1.31286 1.71498 1.52254 1.19957 0.95984 0.92574 1.07327 1.21001 0.98676 0.92095 0.93299 1.20282 0.95906 0.94893 1.05564 1.25073 0.96717 1.06492 0.90113 1.86524 1.52554 1.72876 1.23733 0.93879 0.85678 0.80185 0.75056 1.17875 0.94554 0.77414 0.99878 1.91189 1.94610 1.29066 1.92862 1.21462 0.98777 0.94422 1.01202 1.21543 0.96716 0.93990 0.93843 1.23379 0.94086 1.02537 0.96129 1.21099 1.00817 0.90967 0.97594 1.21351 0.94182 0.99228 1.03468 1.21254 0.95156 0.97628 0.97130 1.21495 1.00918 0.92462 1.08731 0.92085 0.92274 0.86424 0.88253 0.91619 0.74566 0.85201 0.87072 0.75768 1.21424 1.21184 0.79991 0.80953 0.89580 0.87939 0.84014 0.84442 0.84316 0.84264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.32 9.43 -92.46 -0.87 -1.20 16 3 C 0.11 0.28 6.66 22.50 0.15 0.43 16 4 C -0.12 -0.15 5.30 -19.77 -0.10 -0.25 16 5 C -0.06 0.10 3.75 -11.01 -0.04 0.06 16 6 H 0.10 -0.22 7.32 -2.39 -0.02 -0.24 16 7 C -0.14 0.12 7.26 31.12 0.23 0.35 16 8 C 0.12 -0.06 4.32 45.52 0.20 0.13 16 9 H 0.09 0.32 7.46 -2.39 -0.02 0.30 16 10 N -0.69 1.15 5.21 -443.02 -2.31 -1.16 16 11 C 0.56 2.74 7.77 86.75 0.67 3.41 16 12 O -0.58 -8.13 15.94 -3.95 -0.06 -8.20 16 13 C -0.16 -0.17 5.87 -20.09 -0.12 -0.29 16 14 C -0.03 -0.13 9.21 22.52 0.21 0.08 16 15 C -0.17 -0.23 4.78 -19.86 -0.09 -0.32 16 16 C -0.07 -0.19 2.81 71.24 0.20 0.01 16 17 O -0.55 -1.77 12.88 -148.98 -1.92 -3.69 16 18 Si 0.75 1.31 29.57 68.60 2.03 3.34 16 19 C 0.12 -0.37 6.63 22.47 0.15 -0.22 16 20 F -0.10 0.50 13.46 44.97 0.61 1.10 16 21 C -0.14 1.01 10.01 22.27 0.22 1.24 16 22 C -0.04 0.28 9.54 22.51 0.21 0.49 16 23 C -0.12 0.45 7.29 31.12 0.23 0.68 16 24 C -0.09 -0.01 8.61 22.25 0.19 0.18 16 25 C -0.16 -0.01 10.04 22.28 0.22 0.21 16 26 C -0.09 -0.02 10.04 22.25 0.22 0.20 16 27 C -0.22 -0.22 9.04 22.37 0.20 -0.01 16 28 H 0.06 -0.38 7.65 -2.39 -0.02 -0.40 16 29 H 0.06 -0.35 7.67 -2.39 -0.02 -0.37 16 30 H 0.12 -1.05 8.14 -2.39 -0.02 -1.07 16 31 H 0.10 -0.16 6.32 -2.39 -0.02 -0.18 16 32 H 0.07 0.08 8.14 -2.39 -0.02 0.06 16 33 H 0.42 -3.38 6.73 -92.71 -0.62 -4.00 16 34 H 0.13 0.89 7.59 -2.91 -0.02 0.87 16 35 H 0.11 0.41 7.77 -2.39 -0.02 0.39 16 36 H 0.39 -1.83 8.42 -74.06 -0.62 -2.45 16 37 H -0.29 -2.34 7.11 99.48 0.71 -1.64 16 38 H -0.29 -1.98 7.11 99.48 0.71 -1.27 16 39 H 0.18 -2.46 8.06 -2.91 -0.02 -2.48 16 40 H 0.17 -2.38 6.40 -2.91 -0.02 -2.40 16 41 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 42 H 0.10 -0.41 7.73 -2.38 -0.02 -0.43 16 43 H 0.14 -0.47 6.67 -2.91 -0.02 -0.49 16 44 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 45 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 46 H 0.14 -0.36 6.30 -2.91 -0.02 -0.38 16 Total: 0.00 -21.42 382.06 1.37 -20.05 By element: Atomic # 1 Polarization: -17.48 SS G_CDS: -0.16 Total: -17.65 kcal Atomic # 6 Polarization: 3.34 SS G_CDS: 4.06 Total: 7.40 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -2.31 Total: -1.16 kcal Atomic # 8 Polarization: -10.23 SS G_CDS: -2.85 Total: -13.08 kcal Atomic # 9 Polarization: 0.50 SS G_CDS: 0.61 Total: 1.10 kcal Atomic # 14 Polarization: 1.31 SS G_CDS: 2.03 Total: 3.34 kcal Total: -21.42 1.37 -20.05 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.480 kcal (2) G-P(sol) polarization free energy of solvation -21.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.051 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.531 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds