Wall clock time and date at job start Sun Mar 7 2021 05:06:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35900 * 117.00348 * 2 1 4 4 C 1.38708 * 120.05810 * 180.02562 * 3 2 1 5 5 C 1.50700 * 120.02700 * 359.97438 * 4 3 2 6 6 H 1.08995 * 112.85013 * 348.80552 * 5 4 3 7 7 C 1.53781 * 113.61323 * 120.00558 * 5 4 3 8 8 C 1.53774 * 87.08400 * 139.97757 * 7 5 4 9 9 H 1.09002 * 113.61831 * 220.01674 * 8 7 5 10 10 N 1.46509 * 113.61445 * 89.19482 * 8 7 5 11 11 C 1.34772 * 119.99662 * 155.00087 * 10 8 7 12 12 O 1.21577 * 120.00517 * 0.02562 * 11 10 8 13 13 C 1.47673 * 119.99741 * 180.02562 * 11 10 8 14 14 C 1.40008 * 120.45408 * 354.04454 * 13 11 10 15 15 N 1.31305 * 121.37865 * 179.97438 * 14 13 11 16 16 C 1.32824 * 121.88750 * 0.02562 * 15 14 13 17 17 N 1.37151 * 132.96394 * 180.02562 * 16 15 14 18 18 C 1.36950 * 110.11643 * 179.97438 * 17 16 15 19 19 C 1.34179 * 109.94891 * 359.97438 * 18 17 16 20 20 C 1.50695 * 126.59735 * 180.02562 * 19 18 17 21 21 O 1.42900 * 109.47063 * 254.99739 * 20 19 18 22 22 Si 1.86296 * 109.47145 * 14.99971 * 20 19 18 23 23 C 1.41021 * 120.08531 * 359.97438 * 16 15 14 24 24 C 1.39287 * 119.61861 * 359.71062 * 23 16 15 25 25 C 1.50700 * 121.03211 * 180.29506 * 24 23 16 26 26 C 1.53784 * 113.61115 * 217.49843 * 5 4 3 27 27 C 1.38167 * 119.94137 * 180.27524 * 4 3 2 28 28 C 1.38244 * 120.05701 * 359.48981 * 27 4 3 29 29 C 1.38285 * 120.11069 * 0.51246 * 28 27 4 30 30 C 1.38122 * 120.05593 * 359.74050 * 29 28 27 31 31 H 1.08999 * 109.47140 * 59.99802 * 1 2 3 32 32 H 1.09003 * 109.47506 * 180.02562 * 1 2 3 33 33 H 1.09000 * 109.47287 * 299.99956 * 1 2 3 34 34 H 1.08999 * 113.61212 * 254.52910 * 7 5 4 35 35 H 1.09003 * 113.61473 * 25.42729 * 7 5 4 36 36 H 0.96993 * 120.00002 * 335.00527 * 10 8 7 37 37 H 1.08003 * 119.30591 * 359.97438 * 14 13 11 38 38 H 0.97000 * 124.94457 * 359.96145 * 17 16 15 39 39 H 1.07994 * 125.02348 * 180.02562 * 18 17 16 40 40 H 1.09004 * 109.47438 * 134.99811 * 20 19 18 41 41 H 0.96697 * 114.00202 * 60.00153 * 21 20 19 42 42 H 1.48511 * 110.00143 * 179.97438 * 22 20 19 43 43 H 1.48500 * 110.00140 * 301.31924 * 22 20 19 44 44 H 1.09005 * 109.46875 * 263.98013 * 25 24 23 45 45 H 1.08995 * 109.47255 * 23.98273 * 25 24 23 46 46 H 1.08996 * 109.47048 * 143.98513 * 25 24 23 47 47 H 1.08998 * 113.61277 * 334.56647 * 26 5 4 48 48 H 1.09000 * 113.61586 * 105.46936 * 26 5 4 49 49 H 1.08003 * 119.96883 * 179.74802 * 27 4 3 50 50 H 1.08000 * 119.94781 * 180.25539 * 28 27 4 51 51 H 1.08004 * 119.97607 * 179.72847 * 29 28 27 52 52 H 1.08007 * 120.02895 * 180.02562 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.2537 0.0220 -0.0005 6 1 3.6592 -0.8704 0.1949 7 6 5.1799 -0.1098 -1.2211 8 6 6.2405 -0.6675 -0.2574 9 1 7.2495 -0.3110 -0.4647 10 7 6.1742 -2.1214 -0.0894 11 6 7.2733 -2.8077 0.2810 12 8 8.3198 -2.2204 0.4762 13 6 7.2066 -4.2733 0.4499 14 6 5.9818 -4.9441 0.3496 15 7 5.9017 -6.2465 0.4960 16 6 6.9724 -6.9917 0.7461 17 7 7.1504 -8.3383 0.9358 18 6 8.4727 -8.6108 1.1655 19 6 9.1865 -7.4751 1.1333 20 6 10.6737 -7.3425 1.3377 21 8 10.9298 -6.8004 2.6348 22 14 11.4718 -9.0199 1.1969 23 6 8.2420 -6.3888 0.8612 24 6 8.3662 -5.0103 0.7053 25 6 9.7083 -4.3338 0.8154 26 6 5.5269 0.1164 0.8567 27 6 4.0560 2.5171 0.0052 28 6 3.3019 3.6757 0.0008 29 6 1.9209 3.6047 0.0014 30 6 1.2914 2.3753 0.0009 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3634 -1.0277 0.0005 33 1 -0.3634 0.5138 0.8900 34 1 4.8328 -0.8359 -1.9561 35 1 5.4543 0.8466 -1.6663 36 1 5.3393 -2.5900 -0.2448 37 1 5.0842 -4.3784 0.1476 38 1 6.4427 -9.0012 0.9112 39 1 8.8807 -9.5945 1.3451 40 1 11.0870 -6.6786 0.5783 41 1 10.5890 -7.3404 3.3610 42 1 12.9389 -8.9027 1.3958 43 1 10.8941 -9.9436 2.2059 44 1 9.8392 -3.9487 1.8267 45 1 10.4970 -5.0533 0.5956 46 1 9.7594 -3.5100 0.1035 47 1 5.8962 1.1345 0.9795 48 1 5.4601 -0.4272 1.7991 49 1 5.1344 2.5751 0.0089 50 1 3.7922 4.6381 0.0012 51 1 1.3339 4.5113 0.0024 52 1 0.2128 2.3203 0.0010 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_12890568.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:06:57 Heat of formation + Delta-G solvation = 33.326151 kcal Electronic energy + Delta-G solvation = -36073.611399 eV Core-core repulsion = 31392.898004 eV Total energy + Delta-G solvation = -4680.713395 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.173 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -42.86747 -41.74780 -40.93022 -39.62296 -38.66531 -38.04036 -37.79915 -35.23487 -34.61353 -32.16984 -31.85582 -31.03848 -30.75951 -28.94885 -28.14185 -26.66423 -26.64358 -26.06935 -24.72535 -24.01583 -23.10112 -22.55793 -21.98583 -20.68961 -20.13467 -19.40785 -19.05455 -18.71437 -17.74818 -17.51402 -17.36747 -17.03895 -16.73008 -16.66624 -16.62458 -16.47511 -15.97948 -15.67743 -15.53820 -15.35366 -15.31855 -15.11532 -14.81668 -14.68280 -14.36444 -14.15056 -14.02625 -13.94803 -13.72451 -13.63298 -13.43303 -13.31399 -13.18059 -13.02197 -12.95517 -12.73020 -12.45730 -12.27080 -12.01068 -11.80010 -11.70613 -11.62273 -11.29339 -11.15238 -11.13117 -10.57099 -10.27027 -10.12233 -9.75104 -9.62616 -9.13026 -9.05895 -4.83703 -0.35295 -0.09000 0.36002 0.50134 1.35501 1.41340 1.62568 1.68092 1.77987 2.02728 2.05292 2.39402 2.74114 2.77849 3.29731 3.44154 3.50628 3.56278 3.61797 3.67384 3.70086 3.72128 3.77493 3.93720 4.02654 4.11602 4.13898 4.21057 4.25953 4.29469 4.33506 4.37229 4.37932 4.47410 4.50365 4.60260 4.67187 4.70980 4.72430 4.74649 4.80243 4.81592 4.88171 4.94970 5.02875 5.04473 5.12001 5.16154 5.22355 5.24887 5.39104 5.42293 5.50760 5.61060 5.68976 5.72991 5.87080 6.21344 6.45508 6.46215 6.59793 6.82233 7.15527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.330 6.330 3 C 0.112 3.888 4 C -0.115 4.115 5 C -0.058 4.058 6 H 0.099 0.901 7 C -0.124 4.124 8 C 0.120 3.880 9 H 0.094 0.906 10 N -0.697 5.697 11 C 0.573 3.427 12 O -0.563 6.563 13 C -0.240 4.240 14 C 0.180 3.820 15 N -0.516 5.516 16 C 0.289 3.711 17 N -0.559 5.559 18 C 0.090 3.910 19 C -0.196 4.196 20 C -0.060 4.060 21 O -0.550 6.550 22 Si 0.780 3.220 23 C -0.164 4.164 24 C 0.063 3.937 25 C -0.112 4.112 26 C -0.141 4.141 27 C -0.086 4.086 28 C -0.163 4.163 29 C -0.094 4.094 30 C -0.218 4.218 31 H 0.061 0.939 32 H 0.116 0.884 33 H 0.059 0.941 34 H 0.083 0.917 35 H 0.104 0.896 36 H 0.411 0.589 37 H 0.190 0.810 38 H 0.438 0.562 39 H 0.221 0.779 40 H 0.111 0.889 41 H 0.384 0.616 42 H -0.308 1.308 43 H -0.259 1.259 44 H 0.069 0.931 45 H 0.076 0.924 46 H 0.083 0.917 47 H 0.101 0.899 48 H 0.063 0.937 49 H 0.144 0.856 50 H 0.139 0.861 51 H 0.140 0.860 52 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.667 -4.138 -2.604 6.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.244 6.244 3 C 0.067 3.933 4 C -0.116 4.116 5 C -0.077 4.077 6 H 0.117 0.883 7 C -0.162 4.162 8 C 0.015 3.985 9 H 0.112 0.888 10 N -0.348 5.348 11 C 0.362 3.638 12 O -0.443 6.443 13 C -0.248 4.248 14 C 0.011 3.989 15 N -0.229 5.229 16 C 0.055 3.945 17 N -0.166 5.166 18 C -0.036 4.036 19 C -0.203 4.203 20 C -0.168 4.168 21 O -0.357 6.357 22 Si 0.683 3.317 23 C -0.171 4.171 24 C 0.055 3.945 25 C -0.167 4.167 26 C -0.180 4.180 27 C -0.104 4.104 28 C -0.181 4.181 29 C -0.112 4.112 30 C -0.236 4.236 31 H 0.080 0.920 32 H 0.134 0.866 33 H 0.078 0.922 34 H 0.101 0.899 35 H 0.122 0.878 36 H 0.249 0.751 37 H 0.207 0.793 38 H 0.280 0.720 39 H 0.237 0.763 40 H 0.129 0.871 41 H 0.234 0.766 42 H -0.236 1.236 43 H -0.185 1.185 44 H 0.088 0.912 45 H 0.095 0.905 46 H 0.102 0.898 47 H 0.119 0.881 48 H 0.082 0.918 49 H 0.161 0.839 50 H 0.157 0.843 51 H 0.157 0.843 52 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -3.987 -4.682 -2.477 6.630 hybrid contribution -0.733 0.787 1.284 1.675 sum -4.721 -3.895 -1.193 6.235 Atomic orbital electron populations 1.23272 0.76975 1.05313 1.01886 1.86016 1.22814 1.26835 1.88711 1.19101 0.92308 0.84689 0.97207 1.19250 0.90274 0.96015 1.06049 1.21347 0.93702 0.95390 0.97228 0.88265 1.23381 0.94188 1.02529 0.96063 1.21834 1.00141 0.79344 0.97193 0.88836 1.45461 1.12534 1.07517 1.69332 1.17987 0.83511 0.86361 0.75960 1.90741 1.30429 1.70958 1.52198 1.20483 0.95507 0.93956 1.14821 1.22913 0.96596 0.88051 0.91304 1.66509 1.30690 1.07177 1.18505 1.18774 0.90167 0.86587 0.98987 1.41600 1.09804 1.04608 1.60596 1.22329 0.81122 1.00425 0.99755 1.20711 0.95952 0.91179 1.12502 1.24815 0.92567 1.12472 0.86910 1.86606 1.81295 1.52245 1.15599 0.94120 0.75856 0.72960 0.88782 1.19736 0.94861 0.93336 1.09202 1.20064 0.95792 0.91311 0.87372 1.20997 0.92046 1.00608 1.03094 1.23575 0.95318 1.01478 0.97611 1.21109 1.00879 0.90875 0.97541 1.21357 0.94139 0.99238 1.03395 1.21253 0.95193 0.97560 0.97168 1.21491 1.00879 0.92473 1.08794 0.92008 0.86611 0.92226 0.89870 0.87777 0.75093 0.79311 0.72036 0.76289 0.87093 0.76650 1.23600 1.18455 0.91209 0.90540 0.89820 0.88078 0.91836 0.83866 0.84316 0.84264 0.84322 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.33 -1.07 9.43 -92.42 -0.87 -1.94 16 3 C 0.11 0.47 6.66 22.51 0.15 0.62 16 4 C -0.12 -0.33 5.30 -19.77 -0.10 -0.43 16 5 C -0.06 -0.01 3.75 -11.01 -0.04 -0.05 16 6 H 0.10 0.08 7.32 -2.39 -0.02 0.06 16 7 C -0.12 0.23 7.29 31.12 0.23 0.45 16 8 C 0.12 0.12 4.32 45.51 0.20 0.32 16 9 H 0.09 0.40 7.46 -2.39 -0.02 0.38 16 10 N -0.70 -0.81 5.22 -443.06 -2.31 -3.13 16 11 C 0.57 4.30 7.72 86.74 0.67 4.97 16 12 O -0.56 -7.93 13.10 -3.96 -0.05 -7.98 16 13 C -0.24 -1.60 5.89 -19.99 -0.12 -1.72 16 14 C 0.18 0.57 10.67 85.20 0.91 1.48 16 15 N -0.52 -2.91 10.37 -191.74 -1.99 -4.90 16 16 C 0.29 1.36 8.42 134.02 1.13 2.48 16 17 N -0.56 1.60 6.04 -192.25 -1.16 0.44 16 18 C 0.09 -0.48 10.44 82.97 0.87 0.38 16 19 C -0.20 -0.06 5.57 -18.64 -0.10 -0.16 16 20 C -0.06 0.02 2.08 71.23 0.15 0.17 16 21 O -0.55 -1.79 12.88 -148.98 -1.92 -3.71 16 22 Si 0.78 -3.88 30.83 68.60 2.11 -1.76 16 23 C -0.16 -1.00 6.16 -20.19 -0.12 -1.13 16 24 C 0.06 0.54 5.98 -19.25 -0.12 0.43 16 25 C -0.11 -1.03 8.68 71.24 0.62 -0.41 16 26 C -0.14 -0.10 7.25 31.12 0.23 0.12 16 27 C -0.09 -0.10 8.62 22.25 0.19 0.09 16 28 C -0.16 -0.15 10.04 22.28 0.22 0.08 16 29 C -0.09 -0.11 10.04 22.25 0.22 0.11 16 30 C -0.22 -0.51 9.04 22.37 0.20 -0.31 16 31 H 0.06 -0.28 7.66 -2.39 -0.02 -0.30 16 32 H 0.12 -0.76 8.14 -2.39 -0.02 -0.78 16 33 H 0.06 -0.25 7.66 -2.39 -0.02 -0.26 16 34 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 35 H 0.10 -0.29 7.73 -2.39 -0.02 -0.31 16 36 H 0.41 -1.62 6.78 -92.71 -0.63 -2.25 16 37 H 0.19 -0.80 6.43 -2.91 -0.02 -0.82 16 38 H 0.44 -3.67 8.96 -92.71 -0.83 -4.50 16 39 H 0.22 -2.93 6.28 -2.91 -0.02 -2.94 16 40 H 0.11 0.06 6.03 -2.38 -0.01 0.04 16 41 H 0.38 -1.17 8.70 -74.06 -0.64 -1.81 16 42 H -0.31 -1.29 7.11 99.48 0.71 -0.59 16 43 H -0.26 1.20 7.00 99.48 0.70 1.90 16 44 H 0.07 0.82 8.14 -2.38 -0.02 0.80 16 45 H 0.08 0.52 5.06 -2.39 -0.01 0.51 16 46 H 0.08 0.97 5.96 -2.39 -0.01 0.96 16 47 H 0.10 -0.06 6.30 -2.39 -0.02 -0.08 16 48 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 49 H 0.14 -0.36 6.64 -2.91 -0.02 -0.38 16 50 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 51 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 52 H 0.14 -0.17 6.30 -2.91 -0.02 -0.19 16 Total: 0.00 -25.14 415.68 -0.75 -25.89 By element: Atomic # 1 Polarization: -10.41 SS G_CDS: -1.05 Total: -11.46 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: 6.48 Total: 8.55 kcal Atomic # 7 Polarization: -2.13 SS G_CDS: -5.46 Total: -7.59 kcal Atomic # 8 Polarization: -10.79 SS G_CDS: -2.84 Total: -13.63 kcal Atomic # 14 Polarization: -3.88 SS G_CDS: 2.11 Total: -1.76 kcal Total: -25.14 -0.75 -25.89 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_12890568.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.218 kcal (2) G-P(sol) polarization free energy of solvation -25.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds