Wall clock time and date at job start Sun Mar 7 2021 05:07:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35898 * 117.00297 * 2 1 4 4 C 1.38707 * 120.05888 * 179.97438 * 3 2 1 5 5 C 1.50708 * 120.02691 * 359.95471 * 4 3 2 6 6 H 1.08997 * 112.84856 * 11.19390 * 5 4 3 7 7 C 1.53785 * 113.69003 * 142.46090 * 5 4 3 8 8 C 1.53781 * 87.07541 * 139.98999 * 7 5 4 9 9 H 1.09000 * 113.69264 * 220.00598 * 8 7 5 10 10 N 1.46503 * 113.61292 * 89.12044 * 8 7 5 11 11 C 1.34771 * 120.00275 * 107.49832 * 10 8 7 12 12 O 1.21649 * 120.00241 * 359.97438 * 11 10 8 13 13 C 1.47063 * 120.00127 * 180.02562 * 11 10 8 14 14 C 1.35865 * 125.42591 * 179.97438 * 13 11 10 15 15 C 1.41589 * 107.72794 * 180.02562 * 14 13 11 16 16 C 1.40068 * 133.38167 * 179.97438 * 15 14 13 17 17 C 1.36466 * 119.83106 * 180.02562 * 16 15 14 18 18 C 1.38905 * 120.61713 * 0.02562 * 17 16 15 19 19 C 1.50696 * 119.67776 * 179.70200 * 18 17 16 20 20 O 1.42901 * 109.46964 * 245.00235 * 19 18 17 21 21 Si 1.86302 * 109.46950 * 5.00089 * 19 18 17 22 22 C 1.37716 * 120.64635 * 359.97438 * 18 17 16 23 23 C 1.39181 * 119.80857 * 359.97438 * 22 18 17 24 24 N 1.37491 * 133.18794 * 179.97438 * 23 22 18 25 25 C 1.53777 * 87.08620 * 334.56710 * 8 7 5 26 26 C 1.38169 * 119.94417 * 180.22646 * 4 3 2 27 27 C 1.38244 * 120.05580 * 359.47930 * 26 4 3 28 28 C 1.38287 * 120.10806 * 0.54169 * 27 26 4 29 29 C 1.38124 * 120.05936 * 359.70790 * 28 27 26 30 30 H 1.09001 * 109.47069 * 180.02562 * 1 2 3 31 31 H 1.09007 * 109.47449 * 300.00280 * 1 2 3 32 32 H 1.09005 * 109.47221 * 60.00431 * 1 2 3 33 33 H 1.09006 * 113.61075 * 25.44478 * 7 5 4 34 34 H 1.08994 * 113.61677 * 254.54086 * 7 5 4 35 35 H 0.96999 * 119.99810 * 287.49891 * 10 8 7 36 36 H 1.08000 * 126.13547 * 0.03421 * 14 13 11 37 37 H 1.08003 * 120.08174 * 0.02562 * 16 15 14 38 38 H 1.08000 * 119.69218 * 180.02562 * 17 16 15 39 39 H 1.08997 * 109.47272 * 125.00052 * 19 18 17 40 40 H 0.96700 * 113.99737 * 179.97438 * 20 19 18 41 41 H 1.48504 * 109.99886 * 178.68212 * 21 19 18 42 42 H 1.48500 * 110.00129 * 299.99912 * 21 19 18 43 43 H 1.08001 * 120.09443 * 179.97438 * 22 18 17 44 44 H 0.96999 * 125.60460 * 0.03960 * 24 23 22 45 45 H 1.09007 * 113.61401 * 139.97687 * 25 8 7 46 46 H 1.08998 * 113.61861 * 270.88196 * 25 8 7 47 47 H 1.08003 * 119.96820 * 179.74328 * 26 4 3 48 48 H 1.07991 * 119.94577 * 180.29905 * 27 26 4 49 49 H 1.08001 * 119.97090 * 179.72771 * 28 27 26 50 50 H 1.07998 * 120.02859 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0220 0.0022 6 1 3.6592 -0.8706 -0.1922 7 6 5.5270 0.1130 -0.8554 8 6 6.2396 -0.6693 0.2604 9 1 7.2492 -0.3147 0.4678 10 7 6.1704 -2.1232 0.0940 11 6 7.2683 -2.8123 -0.2751 12 8 8.3166 -2.2271 -0.4706 13 6 7.1986 -4.2717 -0.4427 14 6 8.2328 -5.0725 -0.8102 15 6 7.7522 -6.4035 -0.8565 16 6 8.3495 -7.6318 -1.1668 17 6 7.6089 -8.7772 -1.1231 18 6 6.2650 -8.7377 -0.7736 19 6 5.4654 -10.0145 -0.7387 20 8 4.4504 -9.9685 -1.7435 21 14 6.5929 -11.4623 -1.0606 22 6 5.6550 -7.5425 -0.4643 23 6 6.3896 -6.3609 -0.5007 24 7 6.0712 -5.0468 -0.2512 25 6 5.1798 -0.1083 1.2229 26 6 4.0560 2.5171 0.0053 27 6 3.3019 3.6758 -0.0014 28 6 1.9209 3.6047 -0.0015 29 6 1.2914 2.3753 -0.0011 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5138 -0.8901 33 1 5.8975 1.1305 -0.9804 34 1 5.4595 -0.4325 -1.7966 35 1 5.3344 -2.5899 0.2495 36 1 9.2408 -4.7514 -1.0278 37 1 9.3936 -7.6724 -1.4400 38 1 8.0718 -9.7231 -1.3624 39 1 5.0017 -10.1261 0.2414 40 1 3.8959 -10.7600 -1.7789 41 1 5.8221 -12.7301 -0.9973 42 1 7.2314 -11.3222 -2.3940 43 1 4.6095 -7.5221 -0.1942 44 1 5.1982 -4.7179 0.0145 45 1 4.8318 -0.8325 1.9596 46 1 5.4553 0.8487 1.6662 47 1 5.1344 2.5751 0.0099 48 1 3.7922 4.6380 -0.0026 49 1 1.3340 4.5113 -0.0023 50 1 0.2128 2.3203 -0.0007 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13158378.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:07:10 Heat of formation + Delta-G solvation = 17.735960 kcal Electronic energy + Delta-G solvation = -33064.328191 eV Core-core repulsion = 28603.902285 eV Total energy + Delta-G solvation = -4460.425907 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.65078 -41.73431 -40.71411 -39.43598 -38.76286 -38.07708 -37.05546 -34.71645 -33.26545 -32.03907 -31.10985 -30.98874 -30.37939 -28.33121 -27.22196 -26.78056 -26.01966 -24.39610 -23.32417 -22.99306 -22.57032 -21.87775 -21.17687 -20.23937 -19.54562 -19.08912 -18.54820 -17.98082 -17.42733 -17.19604 -16.94550 -16.75797 -16.68509 -16.35687 -16.27455 -15.74786 -15.44871 -15.34549 -15.26721 -14.97152 -14.94071 -14.75574 -14.60504 -14.34721 -14.21363 -14.07171 -13.84463 -13.57499 -13.46781 -13.22080 -13.10490 -12.88022 -12.68006 -12.37127 -12.29290 -12.13124 -12.07467 -11.82000 -11.73999 -11.61893 -11.23155 -11.19747 -10.87607 -10.48692 -10.21116 -9.79865 -9.26260 -9.10522 -8.76385 -4.94158 -0.28300 0.31233 0.46666 0.58492 1.04824 1.28438 1.60962 1.79932 1.93654 1.98504 2.26331 2.29749 2.72820 2.77905 3.35528 3.38292 3.56382 3.59912 3.64367 3.68540 3.83174 3.87004 3.91180 4.00394 4.07083 4.10674 4.14335 4.15159 4.21198 4.34164 4.37230 4.39694 4.41815 4.49135 4.50039 4.58835 4.62796 4.64353 4.68586 4.77312 4.85694 4.95258 4.95417 5.01088 5.03410 5.08524 5.32540 5.36622 5.43544 5.45477 5.54453 5.59829 5.61333 5.66719 5.78532 6.01925 6.23877 6.37648 6.39268 6.42013 7.03563 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.103 4.103 5 C -0.064 4.064 6 H 0.100 0.900 7 C -0.144 4.144 8 C 0.120 3.880 9 H 0.110 0.890 10 N -0.711 5.711 11 C 0.588 3.412 12 O -0.515 6.515 13 C 0.013 3.987 14 C -0.098 4.098 15 C -0.116 4.116 16 C -0.050 4.050 17 C -0.144 4.144 18 C -0.041 4.041 19 C -0.076 4.076 20 O -0.536 6.536 21 Si 0.688 3.312 22 C -0.103 4.103 23 C 0.116 3.884 24 N -0.579 5.579 25 C -0.135 4.135 26 C -0.080 4.080 27 C -0.153 4.153 28 C -0.083 4.083 29 C -0.207 4.207 30 H 0.100 0.900 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.097 0.903 34 H 0.074 0.926 35 H 0.397 0.603 36 H 0.159 0.841 37 H 0.133 0.867 38 H 0.130 0.870 39 H 0.076 0.924 40 H 0.379 0.621 41 H -0.263 1.263 42 H -0.254 1.254 43 H 0.125 0.875 44 H 0.417 0.583 45 H 0.075 0.925 46 H 0.100 0.900 47 H 0.131 0.869 48 H 0.125 0.875 49 H 0.125 0.875 50 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.848 -0.627 3.396 5.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.118 0.882 7 C -0.183 4.183 8 C 0.015 3.985 9 H 0.128 0.872 10 N -0.362 5.362 11 C 0.375 3.625 12 O -0.390 6.390 13 C -0.096 4.096 14 C -0.125 4.125 15 C -0.121 4.121 16 C -0.069 4.069 17 C -0.162 4.162 18 C -0.043 4.043 19 C -0.186 4.186 20 O -0.344 6.344 21 Si 0.590 3.410 22 C -0.124 4.124 23 C 0.006 3.994 24 N -0.183 5.183 25 C -0.173 4.173 26 C -0.098 4.098 27 C -0.172 4.172 28 C -0.101 4.101 29 C -0.226 4.226 30 H 0.119 0.881 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.115 0.885 34 H 0.093 0.907 35 H 0.231 0.769 36 H 0.177 0.823 37 H 0.151 0.849 38 H 0.147 0.853 39 H 0.094 0.906 40 H 0.227 0.773 41 H -0.188 1.188 42 H -0.179 1.179 43 H 0.143 0.857 44 H 0.255 0.745 45 H 0.094 0.906 46 H 0.118 0.882 47 H 0.148 0.852 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.659 -0.356 2.677 3.790 hybrid contribution -2.651 0.062 -0.229 2.661 sum -5.310 -0.294 2.448 5.854 Atomic orbital electron populations 1.23082 0.78191 1.04112 1.01471 1.86033 1.21438 1.26856 1.88657 1.18857 0.91805 0.84260 0.96647 1.19013 0.90087 0.95309 1.06004 1.21406 0.94029 0.95899 0.96883 0.88157 1.23594 0.95101 1.01457 0.98114 1.21898 1.00800 0.79025 0.96782 0.87210 1.45556 1.12371 1.07857 1.70396 1.17178 0.83909 0.84566 0.76848 1.90880 1.29177 1.68989 1.49954 1.20064 0.87866 0.90845 1.10861 1.20971 0.98983 0.90389 1.02176 1.18222 0.93056 0.94037 1.06783 1.20350 0.99851 0.89901 0.96798 1.20463 0.93539 0.98487 1.03751 1.18913 0.93324 0.92899 0.99164 1.24820 0.95997 1.03902 0.93875 1.86603 1.46796 1.44115 1.56836 0.94869 0.84096 0.75011 0.87061 1.19828 0.99238 0.88898 1.04423 1.18272 0.94875 0.84535 1.01704 1.41883 1.11167 1.05150 1.60145 1.23446 0.95196 1.02297 0.96368 1.20885 1.00078 0.90994 0.97810 1.21088 0.93929 0.98542 1.03599 1.20985 0.94803 0.97052 0.97264 1.21267 1.00128 0.92430 1.08727 0.88126 0.92557 0.92569 0.88456 0.90692 0.76917 0.82344 0.84908 0.85300 0.90569 0.77265 1.18812 1.17880 0.85720 0.74522 0.90593 0.88168 0.85169 0.85700 0.85728 0.85464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.35 9.43 -19.42 -0.18 -0.54 16 3 C 0.13 0.20 6.66 -39.22 -0.26 -0.06 16 4 C -0.10 -0.09 5.30 -104.47 -0.55 -0.65 16 5 C -0.06 0.03 3.74 -90.95 -0.34 -0.31 16 6 H 0.10 -0.02 7.32 -51.93 -0.38 -0.40 16 7 C -0.14 0.07 7.26 -25.92 -0.19 -0.12 16 8 C 0.12 -0.04 4.32 -67.12 -0.29 -0.33 16 9 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 10 N -0.71 0.29 5.26 -54.21 -0.29 0.00 16 11 C 0.59 1.46 7.80 -12.68 -0.10 1.36 16 12 O -0.52 -3.09 16.44 5.23 0.09 -3.00 16 13 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 14 C -0.10 -0.25 10.53 -39.16 -0.41 -0.66 16 15 C -0.12 -0.28 6.16 -106.93 -0.66 -0.94 16 16 C -0.05 -0.06 10.06 -39.53 -0.40 -0.45 16 17 C -0.14 -0.12 8.59 -39.97 -0.34 -0.47 16 18 C -0.04 -0.05 5.39 -104.57 -0.56 -0.62 16 19 C -0.08 0.02 2.78 36.00 0.10 0.12 16 20 O -0.54 -0.55 12.80 -35.23 -0.45 -1.00 16 21 Si 0.69 -0.68 29.81 -169.99 -5.07 -5.75 16 22 C -0.10 -0.14 9.68 -39.42 -0.38 -0.52 16 23 C 0.12 0.21 7.25 -83.97 -0.61 -0.40 16 24 N -0.58 -0.02 6.07 -7.35 -0.04 -0.07 16 25 C -0.14 0.19 7.29 -25.92 -0.19 0.01 16 26 C -0.08 -0.01 8.60 -39.60 -0.34 -0.35 16 27 C -0.15 -0.03 10.04 -39.56 -0.40 -0.43 16 28 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 29 C -0.21 -0.16 9.04 -39.43 -0.36 -0.52 16 30 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.06 -0.14 7.66 -51.92 -0.40 -0.54 16 32 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 33 H 0.10 -0.10 6.34 -51.93 -0.33 -0.43 16 34 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.40 -1.10 7.76 -40.82 -0.32 -1.41 16 36 H 0.16 0.27 8.06 -52.49 -0.42 -0.15 16 37 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 38 H 0.13 -0.12 4.81 -52.49 -0.25 -0.37 16 39 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 40 H 0.38 -1.12 8.74 45.56 0.40 -0.72 16 41 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 42 H -0.25 -0.55 7.04 56.52 0.40 -0.15 16 43 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 44 H 0.42 -1.24 8.12 -40.82 -0.33 -1.57 16 45 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.10 -0.18 7.71 -51.93 -0.40 -0.58 16 47 H 0.13 -0.21 6.68 -52.48 -0.35 -0.56 16 48 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 49 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 50 H 0.13 -0.11 6.30 -52.49 -0.33 -0.44 16 LS Contribution 410.53 15.07 6.19 6.19 Total: 0.00 -9.48 410.53 -12.49 -21.98 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -6.47 Total: -12.44 kcal Atomic # 6 Polarization: 0.88 SS G_CDS: -6.26 Total: -5.38 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.33 Total: -0.06 kcal Atomic # 8 Polarization: -3.99 SS G_CDS: -0.55 Total: -4.54 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.07 Total: -5.75 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -9.48 -12.49 -21.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13158378.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.715 kcal (2) G-P(sol) polarization free energy of solvation -9.484 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.231 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.979 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds