Wall clock time and date at job start Sun Mar 7 2021 05:07:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35906 * 117.00376 * 2 1 4 4 C 1.38699 * 120.05680 * 180.02562 * 3 2 1 5 5 C 1.50700 * 120.03177 * 359.95583 * 4 3 2 6 6 H 1.09002 * 112.84673 * 348.79780 * 5 4 3 7 7 C 1.53778 * 113.61648 * 119.99936 * 5 4 3 8 8 C 1.53791 * 87.08143 * 140.06443 * 7 5 4 9 9 H 1.08998 * 113.61378 * 219.93269 * 8 7 5 10 10 N 1.46507 * 113.60995 * 89.11412 * 8 7 5 11 11 C 1.34780 * 119.99327 * 155.00370 * 10 8 7 12 12 O 1.21576 * 119.99965 * 359.97438 * 11 10 8 13 13 C 1.47652 * 119.99455 * 180.02562 * 11 10 8 14 14 C 1.40169 * 119.97568 * 0.02562 * 13 11 10 15 15 C 1.36352 * 120.66956 * 179.97438 * 14 13 11 16 16 C 1.39332 * 120.23764 * 359.96135 * 15 14 13 17 17 N 1.37405 * 133.25613 * 180.02562 * 16 15 14 18 18 C 1.36866 * 109.98235 * 179.77411 * 17 16 15 19 19 C 1.34190 * 109.96358 * 0.38389 * 18 17 16 20 20 C 1.50701 * 126.53741 * 179.88991 * 19 18 17 21 21 O 1.42896 * 109.47417 * 254.69100 * 20 19 18 22 22 Si 1.86301 * 109.47149 * 14.69116 * 20 19 18 23 23 C 1.40902 * 119.63849 * 0.03992 * 16 15 14 24 24 C 1.39187 * 119.97326 * 179.97438 * 13 11 10 25 25 C 1.53781 * 87.08084 * 334.56765 * 8 7 5 26 26 C 1.38178 * 119.94159 * 180.22949 * 4 3 2 27 27 C 1.38235 * 120.05145 * 359.51491 * 26 4 3 28 28 C 1.38282 * 120.11823 * 0.46279 * 27 26 4 29 29 C 1.38127 * 120.05263 * 359.78934 * 28 27 26 30 30 H 1.08997 * 109.47133 * 59.99832 * 1 2 3 31 31 H 1.08996 * 109.47175 * 180.02562 * 1 2 3 32 32 H 1.09007 * 109.47046 * 300.00517 * 1 2 3 33 33 H 1.08997 * 113.61859 * 25.52066 * 7 5 4 34 34 H 1.09004 * 113.68897 * 254.61921 * 7 5 4 35 35 H 0.96995 * 120.00430 * 335.00403 * 10 8 7 36 36 H 1.08000 * 119.66637 * 359.97438 * 14 13 11 37 37 H 1.08000 * 119.88558 * 179.97438 * 15 14 13 38 38 H 0.97004 * 125.00685 * 359.97438 * 17 16 15 39 39 H 1.07999 * 125.01325 * 180.24272 * 18 17 16 40 40 H 1.09002 * 109.47060 * 134.69127 * 20 19 18 41 41 H 0.96708 * 114.00101 * 59.99427 * 21 20 19 42 42 H 1.48494 * 109.99914 * 58.67711 * 22 20 19 43 43 H 1.48493 * 110.00101 * 179.97438 * 22 20 19 44 44 H 1.08003 * 120.30342 * 0.02562 * 24 13 11 45 45 H 1.08995 * 113.61614 * 139.97843 * 25 8 7 46 46 H 1.08995 * 113.61533 * 270.88564 * 25 8 7 47 47 H 1.07998 * 119.96535 * 179.74649 * 26 4 3 48 48 H 1.08006 * 119.94239 * 180.25086 * 27 26 4 49 49 H 1.07995 * 119.97483 * 179.76755 * 28 27 26 50 50 H 1.08001 * 120.02785 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4310 1.2848 -0.0005 5 6 4.2537 0.0221 -0.0001 6 1 3.6592 -0.8703 0.1958 7 6 5.1798 -0.1102 -1.2206 8 6 6.2398 -0.6697 -0.2570 9 1 7.2493 -0.3154 -0.4649 10 7 6.1704 -2.1234 -0.0883 11 6 7.2683 -2.8118 0.2821 12 8 8.3162 -2.2266 0.4757 13 6 7.1986 -4.2769 0.4516 14 6 5.9905 -4.9512 0.2266 15 6 5.9103 -6.3039 0.3785 16 6 7.0334 -7.0350 0.7600 17 7 7.2541 -8.3721 0.9866 18 6 8.5596 -8.5769 1.3428 19 6 9.2165 -7.4070 1.3681 20 6 10.6686 -7.2007 1.7142 21 8 10.7708 -6.6332 3.0217 22 14 11.5546 -8.8391 1.6775 23 6 8.2536 -6.3688 0.9891 24 6 8.3328 -4.9875 0.8336 25 6 5.5270 0.1144 0.8574 26 6 4.0560 2.5171 0.0043 27 6 3.3019 3.6757 -0.0005 28 6 1.9209 3.6048 -0.0005 29 6 1.2914 2.3753 0.0000 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5139 0.8900 33 1 5.4555 0.8460 -1.6653 34 1 4.8330 -0.8353 -1.9569 35 1 5.3345 -2.5903 -0.2431 36 1 5.1144 -4.3938 -0.0700 37 1 4.9729 -6.8105 0.2023 38 1 6.5841 -9.0687 0.9034 39 1 8.9960 -9.5378 1.5720 40 1 11.1227 -6.5257 0.9887 41 1 10.3861 -7.1813 3.7195 42 1 11.4287 -9.4545 0.3319 43 1 12.9878 -8.6493 2.0165 44 1 9.2658 -4.4721 1.0076 45 1 5.4593 -0.4296 1.7995 46 1 5.8974 1.1321 0.9808 47 1 5.1344 2.5751 0.0080 48 1 3.7922 4.6381 -0.0009 49 1 1.3341 4.5114 -0.0004 50 1 0.2128 2.3204 0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13287722.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:07:25 Heat of formation + Delta-G solvation = 14.997762 kcal Electronic energy + Delta-G solvation = -33256.578567 eV Core-core repulsion = 28796.033923 eV Total energy + Delta-G solvation = -4460.544644 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.47079 -41.67916 -40.73222 -39.36051 -38.08424 -37.80223 -37.30591 -34.48506 -33.24364 -31.96061 -31.04405 -30.72733 -30.32556 -28.24718 -26.64468 -26.46997 -26.29045 -24.66653 -23.46374 -23.09428 -22.52687 -21.58034 -20.76019 -20.04020 -19.32875 -19.07041 -18.37432 -17.46875 -17.36665 -17.21162 -16.87940 -16.69025 -16.58583 -16.17845 -15.82276 -15.73030 -15.52091 -15.37075 -15.18680 -15.02191 -14.91264 -14.72826 -14.63383 -14.28962 -14.03843 -13.97974 -13.76881 -13.55136 -13.45113 -13.13237 -13.02829 -12.78292 -12.54167 -12.28316 -12.26407 -12.15609 -12.06474 -11.85378 -11.68796 -11.60767 -11.09117 -10.77169 -10.76561 -10.30096 -9.95882 -9.72211 -9.30214 -9.03552 -8.80941 -5.07094 -0.02255 0.21188 0.38140 0.53249 1.32209 1.49004 1.66430 1.98667 2.01563 2.03836 2.21303 2.33015 2.79804 2.99973 3.52404 3.59655 3.60447 3.69738 3.75065 3.78954 3.82839 3.89072 3.91458 4.02802 4.08907 4.10946 4.18008 4.19897 4.23179 4.38553 4.44168 4.44672 4.47493 4.52701 4.55037 4.59426 4.70004 4.74960 4.79517 4.80448 4.92975 4.99449 5.04673 5.09064 5.11584 5.23265 5.28115 5.40715 5.43406 5.50924 5.56098 5.62147 5.63925 5.74729 5.85485 6.00247 6.37342 6.44497 6.62838 6.71448 7.38968 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.102 4.102 5 C -0.064 4.064 6 H 0.101 0.899 7 C -0.136 4.136 8 C 0.121 3.879 9 H 0.106 0.894 10 N -0.711 5.711 11 C 0.567 3.433 12 O -0.536 6.536 13 C -0.168 4.168 14 C -0.066 4.066 15 C -0.134 4.134 16 C 0.119 3.881 17 N -0.585 5.585 18 C 0.061 3.939 19 C -0.192 4.192 20 C -0.034 4.034 21 O -0.539 6.539 22 Si 0.687 3.313 23 C -0.103 4.103 24 C 0.007 3.993 25 C -0.145 4.145 26 C -0.080 4.080 27 C -0.154 4.154 28 C -0.084 4.084 29 C -0.207 4.207 30 H 0.055 0.945 31 H 0.100 0.900 32 H 0.055 0.945 33 H 0.097 0.903 34 H 0.075 0.925 35 H 0.400 0.600 36 H 0.128 0.872 37 H 0.128 0.872 38 H 0.421 0.579 39 H 0.178 0.822 40 H 0.113 0.887 41 H 0.376 0.624 42 H -0.256 1.256 43 H -0.254 1.254 44 H 0.138 0.862 45 H 0.074 0.926 46 H 0.094 0.906 47 H 0.130 0.870 48 H 0.124 0.876 49 H 0.124 0.876 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.488 -4.879 0.285 8.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.103 4.103 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.174 4.174 8 C 0.015 3.985 9 H 0.124 0.876 10 N -0.362 5.362 11 C 0.356 3.644 12 O -0.413 6.413 13 C -0.172 4.172 14 C -0.086 4.086 15 C -0.155 4.155 16 C 0.010 3.990 17 N -0.188 5.188 18 C -0.065 4.065 19 C -0.199 4.199 20 C -0.146 4.146 21 O -0.344 6.344 22 Si 0.589 3.411 23 C -0.108 4.108 24 C -0.012 4.012 25 C -0.183 4.183 26 C -0.098 4.098 27 C -0.172 4.172 28 C -0.102 4.102 29 C -0.226 4.226 30 H 0.074 0.926 31 H 0.119 0.881 32 H 0.074 0.926 33 H 0.116 0.884 34 H 0.094 0.906 35 H 0.236 0.764 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.259 0.741 39 H 0.195 0.805 40 H 0.130 0.870 41 H 0.223 0.777 42 H -0.181 1.181 43 H -0.178 1.178 44 H 0.156 0.844 45 H 0.093 0.907 46 H 0.113 0.887 47 H 0.148 0.852 48 H 0.142 0.858 49 H 0.142 0.858 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.768 -4.774 -0.283 6.753 hybrid contribution -1.518 0.168 -0.451 1.592 sum -6.286 -4.605 -0.734 7.827 Atomic orbital electron populations 1.23073 0.78272 1.04083 1.01413 1.86043 1.21366 1.26830 1.88657 1.18856 0.91809 0.84241 0.96679 1.19046 0.90102 0.95391 1.05715 1.21405 0.94012 0.95788 0.96978 0.88040 1.23437 0.95382 1.02170 0.96389 1.21832 1.00427 0.79776 0.96417 0.87607 1.45561 1.12872 1.07277 1.70529 1.18172 0.83372 0.86791 0.76091 1.90795 1.29500 1.70660 1.50386 1.19535 0.94994 0.92709 1.09982 1.20594 0.96566 0.93577 0.97872 1.19661 0.96439 0.93588 1.05766 1.18433 0.95807 0.83790 1.00997 1.41734 1.10631 1.06692 1.59714 1.21676 0.83552 0.99081 1.02232 1.20761 0.96464 0.91677 1.11031 1.24411 0.94205 1.08845 0.87107 1.86540 1.82623 1.50060 1.15198 0.95344 0.81521 0.79029 0.85254 1.18921 0.92778 0.93021 1.06039 1.20702 0.98011 0.91294 0.91205 1.23588 0.95149 1.01336 0.98255 1.20893 1.00095 0.91006 0.97797 1.21082 0.93931 0.98523 1.03667 1.20970 0.94788 0.97027 0.97427 1.21260 1.00086 0.92440 1.08806 0.92608 0.88125 0.92622 0.88444 0.90606 0.76430 0.85415 0.85453 0.74125 0.80466 0.87014 0.77658 1.18109 1.17846 0.84380 0.90711 0.88724 0.85181 0.85764 0.85790 0.85504 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.48 9.43 -19.44 -0.18 -0.66 16 3 C 0.13 0.26 6.66 -39.22 -0.26 0.00 16 4 C -0.10 -0.16 5.30 -104.47 -0.55 -0.71 16 5 C -0.06 -0.02 3.74 -90.96 -0.34 -0.36 16 6 H 0.10 0.06 7.33 -51.93 -0.38 -0.32 16 7 C -0.14 0.05 7.29 -25.91 -0.19 -0.14 16 8 C 0.12 0.12 4.33 -67.11 -0.29 -0.17 16 9 H 0.11 0.27 7.46 -51.93 -0.39 -0.12 16 10 N -0.71 -0.77 5.21 -54.01 -0.28 -1.05 16 11 C 0.57 2.33 7.76 -12.42 -0.10 2.24 16 12 O -0.54 -4.25 15.93 5.30 0.08 -4.17 16 13 C -0.17 -0.48 5.87 -104.98 -0.62 -1.10 16 14 C -0.07 -0.01 9.46 -39.54 -0.37 -0.39 16 15 C -0.13 0.04 10.00 -39.85 -0.40 -0.36 16 16 C 0.12 0.09 7.27 -83.95 -0.61 -0.52 16 17 N -0.59 1.11 6.05 -10.61 -0.06 1.05 16 18 C 0.06 -0.12 10.43 -16.73 -0.17 -0.29 16 19 C -0.19 -0.14 5.58 -102.69 -0.57 -0.71 16 20 C -0.03 -0.02 3.06 36.01 0.11 0.09 16 21 O -0.54 -0.75 12.88 -35.23 -0.45 -1.21 16 22 Si 0.69 -0.94 30.75 -169.99 -5.23 -6.16 16 23 C -0.10 -0.27 6.34 -105.16 -0.67 -0.94 16 24 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 25 C -0.14 -0.09 7.26 -25.91 -0.19 -0.28 16 26 C -0.08 -0.07 8.63 -39.60 -0.34 -0.41 16 27 C -0.15 -0.11 10.04 -39.57 -0.40 -0.51 16 28 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 29 C -0.21 -0.25 9.04 -39.43 -0.36 -0.60 16 30 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 31 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 32 H 0.06 -0.12 7.66 -51.92 -0.40 -0.52 16 33 H 0.10 -0.07 7.73 -51.93 -0.40 -0.47 16 34 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.40 -0.53 6.70 -40.82 -0.27 -0.81 16 36 H 0.13 -0.33 6.36 -52.49 -0.33 -0.67 16 37 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 38 H 0.42 -2.10 8.96 -40.82 -0.37 -2.47 16 39 H 0.18 -0.99 6.34 -52.49 -0.33 -1.33 16 40 H 0.11 0.20 7.96 -51.93 -0.41 -0.21 16 41 H 0.38 -1.07 8.70 45.56 0.40 -0.67 16 42 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 43 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 44 H 0.14 0.70 7.64 -52.48 -0.40 0.30 16 45 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 46 H 0.09 0.00 6.31 -51.93 -0.33 -0.33 16 47 H 0.13 -0.10 6.65 -52.49 -0.35 -0.45 16 48 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 49 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 50 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 LS Contribution 410.40 15.07 6.18 6.18 Total: 0.00 -10.98 410.40 -12.47 -23.46 By element: Atomic # 1 Polarization: -5.97 SS G_CDS: -6.43 Total: -12.40 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -6.10 Total: -5.03 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.35 Total: -0.01 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -0.55 Total: -6.04 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.23 Total: -6.16 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -10.98 -12.47 -23.46 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13287722.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.454 kcal (2) G-P(sol) polarization free energy of solvation -10.984 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds