Wall clock time and date at job start Sun Mar 7 2021 05:07:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35897 * 116.99990 * 2 1 4 4 C 1.38714 * 120.05905 * 180.02562 * 3 2 1 5 5 C 1.50700 * 120.02422 * 359.95700 * 4 3 2 6 6 H 1.09004 * 112.85009 * 11.19707 * 5 4 3 7 7 C 1.53784 * 113.61579 * 142.50238 * 5 4 3 8 8 C 1.53779 * 87.08260 * 139.97937 * 7 5 4 9 9 H 1.08994 * 113.69008 * 220.00898 * 8 7 5 10 10 N 1.46502 * 113.61217 * 89.11925 * 8 7 5 11 11 C 1.34767 * 120.00152 * 107.50298 * 10 8 7 12 12 O 1.21637 * 119.99875 * 359.97438 * 11 10 8 13 13 C 1.47262 * 120.00286 * 179.97438 * 11 10 8 14 14 C 1.36770 * 126.93895 * 359.97262 * 13 11 10 15 15 N 1.34661 * 108.39624 * 180.02562 * 14 13 11 16 16 C 1.46501 * 124.85049 * 179.97438 * 15 14 13 17 17 C 1.36450 * 110.29725 * 0.02562 * 15 14 13 18 18 C 1.50701 * 125.57129 * 180.02562 * 17 15 14 19 19 O 1.42905 * 109.46937 * 329.99679 * 18 17 15 20 20 Si 1.86301 * 109.47149 * 209.99608 * 18 17 15 21 21 C 1.34481 * 108.85567 * 0.26177 * 17 15 14 22 22 C 1.53782 * 113.61155 * 239.99839 * 5 4 3 23 23 C 1.38163 * 119.94668 * 180.23290 * 4 3 2 24 24 C 1.38247 * 120.05296 * 359.47344 * 23 4 3 25 25 C 1.38287 * 120.11338 * 0.54762 * 24 23 4 26 26 C 1.38122 * 120.05190 * 359.70649 * 25 24 23 27 27 H 1.08999 * 109.47361 * 60.00044 * 1 2 3 28 28 H 1.08997 * 109.46704 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47189 * 299.99587 * 1 2 3 30 30 H 1.09002 * 113.60962 * 25.43229 * 7 5 4 31 31 H 1.09001 * 113.61342 * 254.53398 * 7 5 4 32 32 H 0.96997 * 119.99782 * 287.49914 * 10 8 7 33 33 H 1.08002 * 125.80514 * 0.02562 * 14 13 11 34 34 H 1.09000 * 109.47314 * 269.99904 * 16 15 14 35 35 H 1.08998 * 109.47005 * 30.00283 * 16 15 14 36 36 H 1.09004 * 109.46875 * 150.00122 * 16 15 14 37 37 H 1.09001 * 109.46927 * 89.99423 * 18 17 15 38 38 H 0.96705 * 113.99788 * 300.00011 * 19 18 17 39 39 H 1.48493 * 110.00101 * 179.97438 * 20 18 17 40 40 H 1.48502 * 109.99925 * 301.31801 * 20 18 17 41 41 H 1.08000 * 126.83378 * 179.74593 * 21 17 15 42 42 H 1.09000 * 113.61227 * 105.47581 * 22 5 4 43 43 H 1.08995 * 113.61709 * 334.56873 * 22 5 4 44 44 H 1.07999 * 119.97186 * 179.74652 * 23 4 3 45 45 H 1.07995 * 119.94326 * 180.25743 * 24 23 4 46 46 H 1.08000 * 119.97667 * 179.72533 * 25 24 23 47 47 H 1.08004 * 120.02496 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 -0.0005 5 6 4.2537 0.0222 -0.0001 6 1 3.6591 -0.8704 -0.1945 7 6 5.5264 0.1158 -0.8584 8 6 6.2407 -0.6672 0.2558 9 1 7.2500 -0.3116 0.4630 10 7 6.1731 -2.1210 0.0875 11 6 7.2715 -2.8082 -0.2833 12 8 8.3189 -2.2214 -0.4786 13 6 7.2037 -4.2696 -0.4520 14 6 6.1081 -5.0679 -0.2706 15 7 6.4638 -6.3417 -0.5242 16 6 5.5645 -7.4950 -0.4381 17 6 7.7818 -6.4049 -0.8718 18 6 8.5357 -7.6606 -1.2263 19 8 7.9727 -8.7691 -0.5217 20 14 10.3260 -7.4658 -0.7489 21 6 8.2992 -5.1640 -0.8413 22 6 5.1807 -0.1086 1.2199 23 6 4.0560 2.5171 0.0043 24 6 3.3018 3.6758 -0.0013 25 6 1.9208 3.6048 -0.0003 26 6 1.2914 2.3753 0.0001 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3632 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 5.8955 1.1339 -0.9822 31 1 5.4588 -0.4286 -1.8003 32 1 5.3378 -2.5888 0.2429 33 1 5.1248 -4.7337 0.0256 34 1 5.5968 -7.9064 0.5708 35 1 4.5470 -7.1804 -0.6699 36 1 5.8808 -8.2564 -1.1512 37 1 8.4630 -7.8374 -2.2994 38 1 8.0033 -8.6800 0.4408 39 1 11.0803 -8.6978 -1.0927 40 1 10.9145 -6.2969 -1.4507 41 1 9.3180 -4.8817 -1.0623 42 1 4.8342 -0.8343 1.9557 43 1 5.4554 0.8480 1.6641 44 1 5.1344 2.5752 0.0081 45 1 3.7921 4.6381 -0.0016 46 1 1.3338 4.5114 -0.0002 47 1 0.2128 2.3203 0.0004 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13287730.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:07:32 Heat of formation + Delta-G solvation = 4.692567 kcal Electronic energy + Delta-G solvation = -29217.300061 eV Core-core repulsion = 25140.986971 eV Total energy + Delta-G solvation = -4076.313089 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.45895 -41.62144 -40.47333 -39.01175 -37.99501 -37.78347 -34.41096 -33.75226 -32.02015 -31.11249 -31.04744 -28.28801 -27.74226 -26.63315 -26.50359 -25.81207 -23.87720 -23.02016 -22.44780 -20.99517 -20.61051 -19.98620 -19.15878 -18.91946 -17.43174 -17.38691 -17.02608 -16.81489 -16.70087 -16.63713 -16.53985 -15.74418 -15.50363 -15.36840 -15.35418 -15.24721 -14.96331 -14.78253 -14.52265 -14.23851 -14.05954 -13.94172 -13.49338 -13.46297 -13.31316 -13.25734 -13.03743 -13.00360 -12.79008 -12.31625 -12.19891 -12.07566 -11.93848 -11.68220 -11.60202 -11.08157 -10.79417 -10.71338 -9.92006 -9.72712 -9.54259 -9.19257 -9.04143 -4.99406 0.37592 0.52464 0.79671 1.07028 1.42794 1.66094 1.87089 2.04925 2.31527 2.33797 2.72168 2.79766 3.19828 3.54341 3.54877 3.70388 3.76587 3.79894 3.83230 3.89874 4.03191 4.09396 4.14322 4.17480 4.18669 4.22690 4.24514 4.37934 4.43907 4.47300 4.47792 4.53478 4.53838 4.69913 4.75731 4.80069 4.85382 4.99898 5.01430 5.03039 5.09797 5.11721 5.27042 5.42652 5.54819 5.63248 5.69205 5.79354 5.84953 5.98371 6.15843 6.35104 6.43539 6.73107 7.52927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.102 4.102 5 C -0.063 4.063 6 H 0.101 0.899 7 C -0.145 4.145 8 C 0.123 3.877 9 H 0.106 0.894 10 N -0.714 5.714 11 C 0.594 3.406 12 O -0.541 6.541 13 C -0.225 4.225 14 C 0.051 3.949 15 N -0.425 5.425 16 C 0.066 3.934 17 C -0.020 4.020 18 C -0.043 4.043 19 O -0.545 6.545 20 Si 0.715 3.285 21 C -0.136 4.136 22 C -0.136 4.136 23 C -0.080 4.080 24 C -0.154 4.154 25 C -0.084 4.084 26 C -0.207 4.207 27 H 0.055 0.945 28 H 0.100 0.900 29 H 0.055 0.945 30 H 0.094 0.906 31 H 0.073 0.927 32 H 0.397 0.603 33 H 0.170 0.830 34 H 0.078 0.922 35 H 0.080 0.920 36 H 0.099 0.901 37 H 0.117 0.883 38 H 0.380 0.620 39 H -0.253 1.253 40 H -0.251 1.251 41 H 0.152 0.848 42 H 0.075 0.925 43 H 0.097 0.903 44 H 0.131 0.869 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.664 -1.927 3.373 6.868 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.103 4.103 5 C -0.082 4.082 6 H 0.119 0.881 7 C -0.184 4.184 8 C 0.017 3.983 9 H 0.124 0.876 10 N -0.364 5.364 11 C 0.383 3.617 12 O -0.418 6.418 13 C -0.236 4.236 14 C -0.085 4.085 15 N -0.100 5.100 16 C -0.075 4.075 17 C -0.129 4.129 18 C -0.153 4.153 19 O -0.350 6.350 20 Si 0.614 3.386 21 C -0.161 4.161 22 C -0.174 4.174 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.102 4.102 26 C -0.226 4.226 27 H 0.074 0.926 28 H 0.118 0.882 29 H 0.074 0.926 30 H 0.112 0.888 31 H 0.092 0.908 32 H 0.232 0.768 33 H 0.188 0.812 34 H 0.096 0.904 35 H 0.099 0.901 36 H 0.117 0.883 37 H 0.134 0.866 38 H 0.227 0.773 39 H -0.177 1.177 40 H -0.175 1.175 41 H 0.169 0.831 42 H 0.094 0.906 43 H 0.115 0.885 44 H 0.148 0.852 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.286 -2.229 2.354 5.374 hybrid contribution -1.632 0.173 -0.390 1.687 sum -5.918 -2.056 1.964 6.565 Atomic orbital electron populations 1.23071 0.78290 1.04055 1.01423 1.86040 1.21346 1.26843 1.88671 1.18859 0.91818 0.84230 0.96723 1.19061 0.90100 0.95435 1.05667 1.21402 0.93994 0.95703 0.97062 0.88103 1.23593 0.95184 1.01334 0.98283 1.21791 1.00327 0.79931 0.96201 0.87646 1.45492 1.12748 1.07116 1.71088 1.17387 0.83110 0.85626 0.75626 1.90788 1.29702 1.70497 1.50825 1.20288 0.94805 0.92375 1.16109 1.21923 0.99364 0.83226 1.04007 1.43474 1.08642 1.06950 1.50886 1.22263 0.93213 0.87589 1.04431 1.20799 0.84606 0.96947 1.10521 1.24822 1.08103 0.82843 0.99550 1.86475 1.83831 1.41395 1.23271 0.94076 0.72569 0.80380 0.91544 1.21730 0.99156 0.89966 1.05200 1.23436 0.95420 1.02144 0.96365 1.20893 1.00102 0.91003 0.97790 1.21086 0.93927 0.98529 1.03653 1.20971 0.94793 0.97025 0.97446 1.21257 1.00078 0.92446 1.08812 0.92632 0.88160 0.92593 0.88801 0.90811 0.76833 0.81233 0.90383 0.90091 0.88264 0.86552 0.77267 1.17721 1.17519 0.83062 0.90645 0.88499 0.85167 0.85761 0.85793 0.85518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.42 9.43 -19.42 -0.18 -0.60 16 3 C 0.13 0.25 6.66 -39.22 -0.26 -0.02 16 4 C -0.10 -0.14 5.30 -104.47 -0.55 -0.70 16 5 C -0.06 -0.01 3.75 -90.96 -0.34 -0.35 16 6 H 0.10 0.04 7.32 -51.93 -0.38 -0.34 16 7 C -0.15 -0.08 7.25 -25.92 -0.19 -0.26 16 8 C 0.12 0.10 4.32 -67.11 -0.29 -0.19 16 9 H 0.11 0.25 7.46 -51.93 -0.39 -0.14 16 10 N -0.71 -0.55 5.25 -54.14 -0.28 -0.84 16 11 C 0.59 2.38 7.81 -12.60 -0.10 2.28 16 12 O -0.54 -4.39 16.57 5.25 0.09 -4.30 16 13 C -0.23 -0.56 6.29 -103.35 -0.65 -1.21 16 14 C 0.05 -0.03 10.83 -16.84 -0.18 -0.21 16 15 N -0.42 0.29 3.09 -119.89 -0.37 -0.08 16 16 C 0.07 -0.22 9.81 59.85 0.59 0.36 16 17 C -0.02 -0.01 6.14 -81.86 -0.50 -0.51 16 18 C -0.04 0.03 2.87 36.01 0.10 0.13 16 19 O -0.54 0.88 10.31 -35.23 -0.36 0.52 16 20 Si 0.71 -0.63 31.28 -169.99 -5.32 -5.95 16 21 C -0.14 -0.36 9.49 -37.50 -0.36 -0.72 16 22 C -0.14 0.08 7.29 -25.91 -0.19 -0.11 16 23 C -0.08 -0.06 8.60 -39.61 -0.34 -0.40 16 24 C -0.15 -0.10 10.04 -39.56 -0.40 -0.49 16 25 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 26 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 28 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 30 H 0.09 -0.01 6.32 -51.93 -0.33 -0.33 16 31 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 32 H 0.40 -0.72 7.64 -40.82 -0.31 -1.03 16 33 H 0.17 -0.66 7.45 -52.49 -0.39 -1.05 16 34 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 35 H 0.08 -0.37 8.13 -51.93 -0.42 -0.80 16 36 H 0.10 -0.25 6.73 -51.93 -0.35 -0.60 16 37 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 38 H 0.38 -1.87 8.70 45.56 0.40 -1.48 16 39 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 40 H -0.25 -0.51 6.78 56.52 0.38 -0.12 16 41 H 0.15 0.48 6.66 -52.49 -0.35 0.13 16 42 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 43 H 0.10 -0.09 7.71 -51.93 -0.40 -0.49 16 44 H 0.13 -0.12 6.67 -52.49 -0.35 -0.47 16 45 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 46 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 47 H 0.13 -0.09 6.30 -52.48 -0.33 -0.42 16 LS Contribution 384.25 15.07 5.79 5.79 Total: 0.00 -9.45 384.25 -10.63 -20.08 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -6.57 Total: -12.15 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: -3.42 Total: -2.48 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -0.65 Total: -0.92 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -0.46 Total: -4.38 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.32 Total: -5.95 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -9.45 -10.63 -20.08 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13287730.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.776 kcal (2) G-P(sol) polarization free energy of solvation -9.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.632 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.083 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds