Wall clock time and date at job start Sun Mar 7 2021 05:07:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35896 * 117.00039 * 2 1 4 4 C 1.38712 * 120.05906 * 179.97438 * 3 2 1 5 5 C 1.50702 * 120.02371 * 0.02666 * 4 3 2 6 6 H 1.08993 * 112.84992 * 11.18959 * 5 4 3 7 7 C 1.53774 * 113.61271 * 142.50336 * 5 4 3 8 8 C 1.53776 * 87.08149 * 139.97714 * 7 5 4 9 9 H 1.09002 * 113.61639 * 220.01873 * 8 7 5 10 10 N 1.46507 * 113.61570 * 89.11339 * 8 7 5 11 11 C 1.34783 * 119.99749 * 107.50439 * 10 8 7 12 12 O 1.21576 * 120.00121 * 359.97438 * 11 10 8 13 13 C 1.47598 * 119.99625 * 180.02562 * 11 10 8 14 14 C 1.39712 * 120.08994 * 359.97438 * 13 11 10 15 15 C 1.37719 * 119.91487 * 179.97438 * 14 13 11 16 16 C 1.50697 * 119.96122 * 179.97438 * 15 14 13 17 17 C 1.38984 * 120.08537 * 0.02562 * 15 14 13 18 18 O 1.35707 * 119.91095 * 179.97438 * 17 15 14 19 19 C 1.39016 * 120.17499 * 359.97438 * 17 15 14 20 20 C 1.50705 * 119.95273 * 180.02562 * 19 17 15 21 21 O 1.42899 * 109.47150 * 284.99763 * 20 19 17 22 22 Si 1.86305 * 109.46882 * 164.99887 * 20 19 17 23 23 C 1.37682 * 120.08774 * 359.74406 * 19 17 15 24 24 C 1.53780 * 113.60758 * 239.99787 * 5 4 3 25 25 C 1.38159 * 119.94452 * 180.02562 * 4 3 2 26 26 C 1.38248 * 120.05896 * 359.97438 * 25 4 3 27 27 C 1.38291 * 120.10966 * 359.97438 * 26 25 4 28 28 C 1.38121 * 120.05408 * 359.76441 * 27 26 25 29 29 H 1.09001 * 109.46558 * 60.00270 * 1 2 3 30 30 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47187 * 300.00222 * 1 2 3 32 32 H 1.09002 * 113.61635 * 254.52267 * 7 5 4 33 33 H 1.08999 * 113.61525 * 25.42999 * 7 5 4 34 34 H 0.96994 * 120.00085 * 287.49925 * 10 8 7 35 35 H 1.08005 * 120.04423 * 359.97438 * 14 13 11 36 36 H 1.09009 * 109.46779 * 89.99798 * 16 15 14 37 37 H 1.08995 * 109.47390 * 209.99924 * 16 15 14 38 38 H 1.08995 * 109.47295 * 330.00728 * 16 15 14 39 39 H 0.96702 * 114.00204 * 89.99424 * 18 17 15 40 40 H 1.08998 * 109.47135 * 45.00460 * 20 19 17 41 41 H 0.96700 * 113.99737 * 179.97438 * 21 20 19 42 42 H 1.48502 * 109.99992 * 59.99978 * 22 20 19 43 43 H 1.48492 * 109.99779 * 181.31656 * 22 20 19 44 44 H 1.08001 * 120.04055 * 180.24997 * 23 19 17 45 45 H 1.08996 * 113.61932 * 334.56342 * 24 5 4 46 46 H 1.09003 * 113.61357 * 105.47517 * 24 5 4 47 47 H 1.07999 * 119.97201 * 180.02562 * 25 4 3 48 48 H 1.08002 * 119.94351 * 179.97438 * 26 25 4 49 49 H 1.07990 * 119.96953 * 180.02562 * 27 26 25 50 50 H 1.07995 * 120.02835 * 180.28086 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2849 0.0005 5 6 4.2538 0.0221 0.0005 6 1 3.6593 -0.8703 -0.1949 7 6 5.5269 0.1165 -0.8567 8 6 6.2405 -0.6674 0.2574 9 1 7.2495 -0.3108 0.4648 10 7 6.1730 -2.1211 0.0880 11 6 7.2718 -2.8081 -0.2825 12 8 8.3188 -2.2214 -0.4766 13 6 7.2036 -4.2725 -0.4537 14 6 6.0012 -4.9484 -0.2318 15 6 5.9415 -6.3148 -0.3931 16 6 4.6453 -7.0451 -0.1534 17 6 7.0755 -7.0214 -0.7757 18 8 7.0128 -8.3679 -0.9331 19 6 8.2738 -6.3525 -0.9975 20 6 9.5003 -7.1236 -1.4128 21 8 10.0264 -7.8254 -0.2847 22 14 10.7855 -5.9423 -2.0639 23 6 8.3401 -4.9859 -0.8440 24 6 5.1798 -0.1096 1.2211 25 6 4.0559 2.5171 0.0011 26 6 3.3019 3.6758 0.0005 27 6 1.9208 3.6048 -0.0011 28 6 1.2914 2.3753 -0.0071 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 5.4602 -0.4272 -1.7990 33 1 5.8962 1.1346 -0.9795 34 1 5.3376 -2.5890 0.2425 35 1 5.1196 -4.4001 0.0660 36 1 4.0782 -7.0933 -1.0831 37 1 4.8567 -8.0556 0.1962 38 1 4.0632 -6.5143 0.6000 39 1 6.7763 -8.6487 -1.8277 40 1 9.2341 -7.8369 -2.1929 41 1 10.8185 -8.3449 -0.4791 42 1 11.1569 -4.9644 -1.0099 43 1 11.9877 -6.6933 -2.5063 44 1 9.2705 -4.4665 -1.0205 45 1 5.4543 0.8467 1.6663 46 1 4.8328 -0.8358 1.9562 47 1 5.1344 2.5753 0.0011 48 1 3.7922 4.6381 0.0014 49 1 1.3340 4.5113 -0.0019 50 1 0.2129 2.3203 -0.0129 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:07:36 Heat of formation + Delta-G solvation = -60.722374 kcal Electronic energy + Delta-G solvation = -32994.271655 eV Core-core repulsion = 28533.639539 eV Total energy + Delta-G solvation = -4460.632115 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -41.88667 -41.41496 -40.54325 -39.29500 -38.07443 -37.82325 -37.44184 -34.71144 -34.03412 -32.27414 -31.29540 -31.06889 -28.28044 -28.05589 -26.93056 -26.70382 -26.27340 -24.67409 -23.11988 -22.58132 -21.94326 -21.46959 -20.13057 -19.50516 -19.13270 -18.52675 -18.49974 -17.64151 -17.36695 -16.85841 -16.71481 -16.55563 -16.53492 -16.01596 -15.90465 -15.48265 -15.39020 -15.26905 -15.08909 -14.87559 -14.61278 -14.42808 -14.25402 -14.01738 -13.92460 -13.62703 -13.51776 -13.49582 -13.19721 -13.06256 -12.99267 -12.87676 -12.82374 -12.59279 -12.31608 -12.09098 -11.75383 -11.72890 -11.66602 -11.47699 -11.14595 -10.91825 -10.45576 -10.08918 -9.94129 -9.75925 -9.60834 -9.06410 -4.94047 -0.32774 0.11173 0.35162 0.50362 1.26173 1.61224 1.70977 1.99859 2.06287 2.30325 2.61570 2.76884 3.04864 3.31541 3.46791 3.57417 3.63936 3.66369 3.70696 3.78351 3.87749 3.97404 3.99767 4.05859 4.14199 4.14968 4.17916 4.19859 4.31681 4.39518 4.41609 4.44357 4.52961 4.56838 4.64220 4.65728 4.68029 4.70200 4.74755 4.85394 4.94086 5.02481 5.03296 5.07887 5.13111 5.14180 5.19252 5.30764 5.40181 5.47895 5.56332 5.60280 5.67680 5.82414 6.41680 6.45637 6.48041 6.58546 7.22092 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.064 4.064 6 H 0.102 0.898 7 C -0.144 4.144 8 C 0.120 3.880 9 H 0.107 0.893 10 N -0.708 5.708 11 C 0.565 3.435 12 O -0.530 6.530 13 C -0.138 4.138 14 C -0.065 4.065 15 C -0.118 4.118 16 C -0.114 4.114 17 C 0.160 3.840 18 O -0.484 6.484 19 C -0.104 4.104 20 C -0.063 4.063 21 O -0.528 6.528 22 Si 0.677 3.323 23 C -0.047 4.047 24 C -0.136 4.136 25 C -0.080 4.080 26 C -0.154 4.154 27 C -0.084 4.084 28 C -0.207 4.207 29 H 0.055 0.945 30 H 0.101 0.899 31 H 0.055 0.945 32 H 0.075 0.925 33 H 0.095 0.905 34 H 0.401 0.599 35 H 0.132 0.868 36 H 0.073 0.927 37 H 0.077 0.923 38 H 0.070 0.930 39 H 0.393 0.607 40 H 0.075 0.925 41 H 0.379 0.621 42 H -0.250 1.250 43 H -0.257 1.257 44 H 0.145 0.855 45 H 0.098 0.902 46 H 0.076 0.924 47 H 0.130 0.870 48 H 0.124 0.876 49 H 0.124 0.876 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.971 -0.170 -3.092 6.726 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.103 4.103 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.182 4.182 8 C 0.014 3.986 9 H 0.125 0.875 10 N -0.360 5.360 11 C 0.352 3.648 12 O -0.407 6.407 13 C -0.141 4.141 14 C -0.084 4.084 15 C -0.119 4.119 16 C -0.170 4.170 17 C 0.115 3.885 18 O -0.295 6.295 19 C -0.105 4.105 20 C -0.172 4.172 21 O -0.335 6.335 22 Si 0.578 3.422 23 C -0.065 4.065 24 C -0.174 4.174 25 C -0.098 4.098 26 C -0.172 4.172 27 C -0.102 4.102 28 C -0.226 4.226 29 H 0.074 0.926 30 H 0.119 0.881 31 H 0.074 0.926 32 H 0.094 0.906 33 H 0.114 0.886 34 H 0.237 0.763 35 H 0.150 0.850 36 H 0.092 0.908 37 H 0.096 0.904 38 H 0.089 0.911 39 H 0.250 0.750 40 H 0.093 0.907 41 H 0.227 0.773 42 H -0.174 1.174 43 H -0.182 1.182 44 H 0.163 0.837 45 H 0.117 0.883 46 H 0.094 0.906 47 H 0.148 0.852 48 H 0.142 0.858 49 H 0.142 0.858 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.680 0.643 -2.252 5.233 hybrid contribution -0.565 -0.992 0.181 1.155 sum -5.245 -0.349 -2.071 5.650 Atomic orbital electron populations 1.23079 0.78233 1.04107 1.01429 1.86041 1.21393 1.26809 1.88642 1.18860 0.91808 0.84258 0.96638 1.19035 0.90104 0.95363 1.05844 1.21407 0.94010 0.95846 0.96921 0.88010 1.23586 0.95115 1.01357 0.98186 1.21867 1.00583 0.79501 0.96620 0.87480 1.45567 1.12762 1.07488 1.70165 1.18114 0.83565 0.86606 0.76476 1.90807 1.29426 1.70413 1.50073 1.19765 0.94753 0.93077 1.06533 1.21102 0.96708 0.93482 0.97106 1.20178 0.95976 0.93602 1.02096 1.20729 0.92951 1.00975 1.02388 1.18298 0.91112 0.82918 0.96184 1.84781 1.92046 1.17271 1.35407 1.19537 0.94422 0.93016 1.03541 1.24564 0.99500 1.01152 0.92019 1.86639 1.47247 1.65705 1.33951 0.95081 0.79247 0.80761 0.87130 1.21084 0.98515 0.92531 0.94421 1.23445 0.95304 1.02237 0.96423 1.20885 1.00075 0.91008 0.97822 1.21088 0.93932 0.98526 1.03661 1.20976 0.94793 0.97044 0.97362 1.21262 1.00107 0.92435 1.08764 0.92608 0.88106 0.92593 0.90645 0.88631 0.76331 0.84986 0.90806 0.90445 0.91057 0.74986 0.90729 0.77295 1.17420 1.18248 0.83744 0.88349 0.90564 0.85193 0.85756 0.85778 0.85488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.32 9.43 -19.41 -0.18 -0.51 16 3 C 0.13 0.20 6.66 -39.21 -0.26 -0.06 16 4 C -0.10 -0.10 5.30 -104.47 -0.55 -0.65 16 5 C -0.06 0.02 3.75 -90.96 -0.34 -0.32 16 6 H 0.10 -0.02 7.32 -51.93 -0.38 -0.40 16 7 C -0.14 0.05 7.25 -25.92 -0.19 -0.14 16 8 C 0.12 0.01 4.32 -67.12 -0.29 -0.28 16 9 H 0.11 0.17 7.47 -51.93 -0.39 -0.22 16 10 N -0.71 -0.12 5.21 -54.03 -0.28 -0.40 16 11 C 0.56 1.70 7.76 -12.44 -0.10 1.61 16 12 O -0.53 -3.49 15.94 5.30 0.08 -3.41 16 13 C -0.14 -0.27 5.87 -104.96 -0.62 -0.89 16 14 C -0.07 0.01 9.18 -39.22 -0.36 -0.35 16 15 C -0.12 -0.02 5.89 -104.54 -0.62 -0.64 16 16 C -0.11 0.20 9.78 36.00 0.35 0.55 16 17 C 0.16 0.21 6.66 -39.02 -0.26 -0.05 16 18 O -0.48 -0.15 11.84 -18.83 -0.22 -0.37 16 19 C -0.10 -0.21 5.30 -104.53 -0.55 -0.76 16 20 C -0.06 -0.05 2.36 36.01 0.09 0.04 16 21 O -0.53 -1.35 12.86 -35.23 -0.45 -1.81 16 22 Si 0.68 0.32 30.18 -169.99 -5.13 -4.81 16 23 C -0.05 -0.13 8.20 -39.22 -0.32 -0.45 16 24 C -0.14 0.13 7.29 -25.92 -0.19 -0.06 16 25 C -0.08 -0.02 8.61 -39.61 -0.34 -0.36 16 26 C -0.15 -0.05 10.04 -39.56 -0.40 -0.44 16 27 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 28 C -0.21 -0.16 9.04 -39.43 -0.36 -0.52 16 29 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 30 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 31 H 0.06 -0.14 7.68 -51.93 -0.40 -0.54 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.10 -0.09 6.31 -51.93 -0.33 -0.42 16 34 H 0.40 -0.87 6.72 -40.82 -0.27 -1.15 16 35 H 0.13 -0.40 6.39 -52.48 -0.34 -0.73 16 36 H 0.07 -0.22 8.14 -51.92 -0.42 -0.64 16 37 H 0.08 -0.07 7.52 -51.93 -0.39 -0.46 16 38 H 0.07 -0.18 8.08 -51.93 -0.42 -0.60 16 39 H 0.39 -1.78 9.06 45.56 0.41 -1.36 16 40 H 0.07 -0.11 7.82 -51.93 -0.41 -0.52 16 41 H 0.38 -0.59 8.74 45.56 0.40 -0.20 16 42 H -0.25 -1.05 6.76 56.52 0.38 -0.67 16 43 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 44 H 0.15 0.47 4.47 -52.49 -0.23 0.24 16 45 H 0.10 -0.13 7.72 -51.93 -0.40 -0.53 16 46 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.13 -0.18 6.66 -52.49 -0.35 -0.53 16 48 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 49 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 50 H 0.13 -0.12 6.30 -52.49 -0.33 -0.45 16 LS Contribution 407.06 15.07 6.13 6.13 Total: 0.00 -10.38 407.06 -10.74 -21.12 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -5.98 Total: -12.69 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -4.71 Total: -3.27 kcal Atomic # 7 Polarization: -0.12 SS G_CDS: -0.28 Total: -0.40 kcal Atomic # 8 Polarization: -5.32 SS G_CDS: -0.77 Total: -6.09 kcal Atomic # 14 Polarization: 0.32 SS G_CDS: -5.13 Total: -4.81 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.38 -10.74 -21.12 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.602 kcal (2) G-P(sol) polarization free energy of solvation -10.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.983 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.120 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds