Wall clock time and date at job start Sun Mar 7 2021 05:07:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35896 * 117.00039 * 2 1 4 4 C 1.38712 * 120.05906 * 179.97438 * 3 2 1 5 5 C 1.50702 * 120.02371 * 0.02666 * 4 3 2 6 6 H 1.08993 * 112.84992 * 11.18959 * 5 4 3 7 7 C 1.53774 * 113.61271 * 142.50336 * 5 4 3 8 8 C 1.53776 * 87.08149 * 139.97714 * 7 5 4 9 9 H 1.09002 * 113.61639 * 220.01873 * 8 7 5 10 10 N 1.46507 * 113.61570 * 89.11339 * 8 7 5 11 11 C 1.34783 * 119.99749 * 107.50439 * 10 8 7 12 12 O 1.21576 * 120.00121 * 359.97438 * 11 10 8 13 13 C 1.47598 * 119.99625 * 180.02562 * 11 10 8 14 14 C 1.39712 * 120.08994 * 359.97438 * 13 11 10 15 15 C 1.37719 * 119.91487 * 179.97438 * 14 13 11 16 16 C 1.50697 * 119.96122 * 179.97438 * 15 14 13 17 17 C 1.38984 * 120.08537 * 0.02562 * 15 14 13 18 18 O 1.35707 * 119.91095 * 179.97438 * 17 15 14 19 19 C 1.39016 * 120.17499 * 359.97438 * 17 15 14 20 20 C 1.50705 * 119.95273 * 180.02562 * 19 17 15 21 21 O 1.42899 * 109.47150 * 284.99763 * 20 19 17 22 22 Si 1.86305 * 109.46882 * 164.99887 * 20 19 17 23 23 C 1.37682 * 120.08774 * 359.74406 * 19 17 15 24 24 C 1.53780 * 113.60758 * 239.99787 * 5 4 3 25 25 C 1.38159 * 119.94452 * 180.02562 * 4 3 2 26 26 C 1.38248 * 120.05896 * 359.97438 * 25 4 3 27 27 C 1.38291 * 120.10966 * 359.97438 * 26 25 4 28 28 C 1.38121 * 120.05408 * 359.76441 * 27 26 25 29 29 H 1.09001 * 109.46558 * 60.00270 * 1 2 3 30 30 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47187 * 300.00222 * 1 2 3 32 32 H 1.09002 * 113.61635 * 254.52267 * 7 5 4 33 33 H 1.08999 * 113.61525 * 25.42999 * 7 5 4 34 34 H 0.96994 * 120.00085 * 287.49925 * 10 8 7 35 35 H 1.08005 * 120.04423 * 359.97438 * 14 13 11 36 36 H 1.09009 * 109.46779 * 89.99798 * 16 15 14 37 37 H 1.08995 * 109.47390 * 209.99924 * 16 15 14 38 38 H 1.08995 * 109.47295 * 330.00728 * 16 15 14 39 39 H 0.96702 * 114.00204 * 89.99424 * 18 17 15 40 40 H 1.08998 * 109.47135 * 45.00460 * 20 19 17 41 41 H 0.96700 * 113.99737 * 179.97438 * 21 20 19 42 42 H 1.48502 * 109.99992 * 59.99978 * 22 20 19 43 43 H 1.48492 * 109.99779 * 181.31656 * 22 20 19 44 44 H 1.08001 * 120.04055 * 180.24997 * 23 19 17 45 45 H 1.08996 * 113.61932 * 334.56342 * 24 5 4 46 46 H 1.09003 * 113.61357 * 105.47517 * 24 5 4 47 47 H 1.07999 * 119.97201 * 180.02562 * 25 4 3 48 48 H 1.08002 * 119.94351 * 179.97438 * 26 25 4 49 49 H 1.07990 * 119.96953 * 180.02562 * 27 26 25 50 50 H 1.07995 * 120.02835 * 180.28086 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2849 0.0005 5 6 4.2538 0.0221 0.0005 6 1 3.6593 -0.8703 -0.1949 7 6 5.5269 0.1165 -0.8567 8 6 6.2405 -0.6674 0.2574 9 1 7.2495 -0.3108 0.4648 10 7 6.1730 -2.1211 0.0880 11 6 7.2718 -2.8081 -0.2825 12 8 8.3188 -2.2214 -0.4766 13 6 7.2036 -4.2725 -0.4537 14 6 6.0012 -4.9484 -0.2318 15 6 5.9415 -6.3148 -0.3931 16 6 4.6453 -7.0451 -0.1534 17 6 7.0755 -7.0214 -0.7757 18 8 7.0128 -8.3679 -0.9331 19 6 8.2738 -6.3525 -0.9975 20 6 9.5003 -7.1236 -1.4128 21 8 10.0264 -7.8254 -0.2847 22 14 10.7855 -5.9423 -2.0639 23 6 8.3401 -4.9859 -0.8440 24 6 5.1798 -0.1096 1.2211 25 6 4.0559 2.5171 0.0011 26 6 3.3019 3.6758 0.0005 27 6 1.9208 3.6048 -0.0011 28 6 1.2914 2.3753 -0.0071 29 1 -0.3632 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5139 0.8900 32 1 5.4602 -0.4272 -1.7990 33 1 5.8962 1.1346 -0.9795 34 1 5.3376 -2.5890 0.2425 35 1 5.1196 -4.4001 0.0660 36 1 4.0782 -7.0933 -1.0831 37 1 4.8567 -8.0556 0.1962 38 1 4.0632 -6.5143 0.6000 39 1 6.7763 -8.6487 -1.8277 40 1 9.2341 -7.8369 -2.1929 41 1 10.8185 -8.3449 -0.4791 42 1 11.1569 -4.9644 -1.0099 43 1 11.9877 -6.6933 -2.5063 44 1 9.2705 -4.4665 -1.0205 45 1 5.4543 0.8467 1.6663 46 1 4.8328 -0.8358 1.9562 47 1 5.1344 2.5753 0.0011 48 1 3.7922 4.6381 0.0014 49 1 1.3340 4.5113 -0.0019 50 1 0.2129 2.3203 -0.0129 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:07:35 Heat of formation + Delta-G solvation = -61.675477 kcal Electronic energy + Delta-G solvation = -32994.312984 eV Core-core repulsion = 28533.639539 eV Total energy + Delta-G solvation = -4460.673445 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -41.94865 -41.42073 -40.59765 -39.36984 -38.04862 -37.91095 -37.50398 -34.83432 -34.05791 -32.29741 -31.31558 -31.03188 -28.14498 -27.99161 -26.98432 -26.68147 -26.29504 -24.74566 -23.09233 -22.58791 -21.95837 -21.58642 -20.15415 -19.50723 -19.10955 -18.62987 -18.58610 -17.70223 -17.34020 -16.86895 -16.64603 -16.57227 -16.55720 -16.12608 -16.05047 -15.61322 -15.34055 -15.29231 -15.09910 -14.89490 -14.63858 -14.35448 -14.22624 -14.01484 -13.97961 -13.66725 -13.54477 -13.47284 -13.17470 -12.98373 -12.90360 -12.89727 -12.74027 -12.66107 -12.27775 -12.00343 -11.97456 -11.74573 -11.64500 -11.48312 -11.16118 -11.14806 -10.53167 -10.21968 -9.97479 -9.75274 -9.64383 -9.05667 -5.02555 -0.40194 0.05893 0.35983 0.50302 1.18942 1.48643 1.58232 1.87701 1.97213 2.39906 2.52537 2.77581 3.09478 3.30643 3.47709 3.53408 3.64062 3.68343 3.70371 3.75851 3.93439 3.98636 4.01750 4.11369 4.14470 4.20876 4.33687 4.34463 4.38793 4.42882 4.47692 4.50281 4.61380 4.66076 4.72090 4.72547 4.75508 4.80066 4.83642 4.84641 4.95607 5.02788 5.04516 5.09999 5.11792 5.17780 5.21353 5.31969 5.42142 5.46549 5.59777 5.61527 5.67446 5.87019 6.40857 6.45906 6.54852 6.77321 7.08040 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.329 6.329 3 C 0.113 3.887 4 C -0.116 4.116 5 C -0.056 4.056 6 H 0.102 0.898 7 C -0.139 4.139 8 C 0.115 3.885 9 H 0.090 0.910 10 N -0.693 5.693 11 C 0.562 3.438 12 O -0.577 6.577 13 C -0.152 4.152 14 C -0.055 4.055 15 C -0.120 4.120 16 C -0.111 4.111 17 C 0.160 3.840 18 O -0.494 6.494 19 C -0.119 4.119 20 C -0.063 4.063 21 O -0.553 6.553 22 Si 0.742 3.258 23 C -0.065 4.065 24 C -0.125 4.125 25 C -0.087 4.087 26 C -0.164 4.164 27 C -0.094 4.094 28 C -0.217 4.217 29 H 0.060 0.940 30 H 0.117 0.883 31 H 0.060 0.940 32 H 0.068 0.932 33 H 0.101 0.899 34 H 0.414 0.586 35 H 0.162 0.838 36 H 0.090 0.910 37 H 0.069 0.931 38 H 0.082 0.918 39 H 0.414 0.586 40 H 0.105 0.895 41 H 0.394 0.606 42 H -0.311 1.311 43 H -0.273 1.273 44 H 0.128 0.872 45 H 0.103 0.897 46 H 0.082 0.918 47 H 0.143 0.857 48 H 0.138 0.862 49 H 0.139 0.861 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.084 -0.923 -3.234 8.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.242 6.242 3 C 0.068 3.932 4 C -0.116 4.116 5 C -0.074 4.074 6 H 0.120 0.880 7 C -0.178 4.178 8 C 0.010 3.990 9 H 0.108 0.892 10 N -0.345 5.345 11 C 0.351 3.649 12 O -0.457 6.457 13 C -0.155 4.155 14 C -0.073 4.073 15 C -0.121 4.121 16 C -0.167 4.167 17 C 0.114 3.886 18 O -0.308 6.308 19 C -0.120 4.120 20 C -0.173 4.173 21 O -0.363 6.363 22 Si 0.649 3.351 23 C -0.084 4.084 24 C -0.163 4.163 25 C -0.104 4.104 26 C -0.182 4.182 27 C -0.112 4.112 28 C -0.236 4.236 29 H 0.078 0.922 30 H 0.135 0.865 31 H 0.079 0.921 32 H 0.086 0.914 33 H 0.119 0.881 34 H 0.252 0.748 35 H 0.179 0.821 36 H 0.109 0.891 37 H 0.088 0.912 38 H 0.101 0.899 39 H 0.274 0.726 40 H 0.123 0.877 41 H 0.245 0.755 42 H -0.240 1.240 43 H -0.199 1.199 44 H 0.145 0.855 45 H 0.121 0.879 46 H 0.101 0.899 47 H 0.160 0.840 48 H 0.156 0.844 49 H 0.157 0.843 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -6.843 -0.140 -2.423 7.261 hybrid contribution 0.072 -0.741 0.258 0.788 sum -6.772 -0.882 -2.166 7.164 Atomic orbital electron populations 1.23280 0.76945 1.05367 1.01869 1.86013 1.22818 1.26724 1.88685 1.19085 0.92251 0.84727 0.97122 1.19236 0.90307 0.95957 1.06147 1.21332 0.93655 0.95489 0.96949 0.88002 1.23561 0.95132 1.01440 0.97638 1.21887 1.00092 0.79430 0.97639 0.89223 1.45460 1.12594 1.07573 1.68823 1.18356 0.83438 0.87160 0.75938 1.90780 1.31190 1.71324 1.52442 1.19759 0.95588 0.92470 1.07683 1.21359 0.96648 0.93607 0.95716 1.20454 0.96576 0.93737 1.01323 1.20767 0.92047 1.00315 1.03583 1.18410 0.91080 0.83363 0.95723 1.84727 1.92150 1.16582 1.37311 1.19657 0.95358 0.92733 1.04209 1.24631 0.98969 1.01537 0.92178 1.86590 1.48326 1.66164 1.35221 0.94340 0.78169 0.77583 0.85019 1.21067 0.98361 0.93212 0.95738 1.23394 0.94252 1.02481 0.96176 1.21101 1.00839 0.90932 0.97566 1.21355 0.94169 0.99218 1.03442 1.21253 0.95163 0.97609 0.97136 1.21490 1.00901 0.92448 1.08745 0.92183 0.86494 0.92122 0.91359 0.88087 0.74759 0.82068 0.89130 0.91176 0.89869 0.72554 0.87742 0.75523 1.24010 1.19936 0.85483 0.87873 0.89911 0.83973 0.84394 0.84290 0.84270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.58 9.43 -92.39 -0.87 -1.45 16 3 C 0.11 0.35 6.66 22.51 0.15 0.50 16 4 C -0.12 -0.23 5.30 -19.77 -0.10 -0.33 16 5 C -0.06 0.04 3.75 -11.02 -0.04 0.00 16 6 H 0.10 -0.08 7.32 -2.39 -0.02 -0.10 16 7 C -0.14 0.02 7.25 31.12 0.23 0.25 16 8 C 0.11 0.12 4.32 45.51 0.20 0.32 16 9 H 0.09 0.45 7.47 -2.39 -0.02 0.43 16 10 N -0.69 -0.58 5.21 -443.13 -2.31 -2.89 16 11 C 0.56 4.31 7.76 86.71 0.67 4.99 16 12 O -0.58 -9.32 15.94 -3.96 -0.06 -9.39 16 13 C -0.15 -0.76 5.87 -20.09 -0.12 -0.88 16 14 C -0.05 0.06 9.18 22.50 0.21 0.27 16 15 C -0.12 0.09 5.89 -19.81 -0.12 -0.03 16 16 C -0.11 0.61 9.78 71.23 0.70 1.31 16 17 C 0.16 0.32 6.66 22.64 0.15 0.47 16 18 O -0.49 0.30 11.84 -90.28 -1.07 -0.77 16 19 C -0.12 -0.55 5.30 -19.81 -0.11 -0.66 16 20 C -0.06 -0.12 2.36 71.24 0.17 0.05 16 21 O -0.55 -3.09 12.86 -148.98 -1.92 -5.00 16 22 Si 0.74 2.07 30.18 68.60 2.07 4.14 16 23 C -0.07 -0.48 8.20 22.50 0.18 -0.30 16 24 C -0.13 0.26 7.29 31.12 0.23 0.49 16 25 C -0.09 -0.05 8.61 22.25 0.19 0.15 16 26 C -0.16 -0.06 10.04 22.28 0.22 0.16 16 27 C -0.09 -0.05 10.04 22.25 0.22 0.17 16 28 C -0.22 -0.31 9.04 22.37 0.20 -0.11 16 29 H 0.06 -0.33 7.65 -2.39 -0.02 -0.35 16 30 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 31 H 0.06 -0.34 7.68 -2.39 -0.02 -0.36 16 32 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 33 H 0.10 -0.13 6.31 -2.39 -0.02 -0.15 16 34 H 0.41 -2.07 6.72 -92.71 -0.62 -2.69 16 35 H 0.16 -1.28 6.39 -2.91 -0.02 -1.30 16 36 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 37 H 0.07 -0.24 7.52 -2.39 -0.02 -0.26 16 38 H 0.08 -0.63 8.08 -2.39 -0.02 -0.65 16 39 H 0.41 -4.44 9.06 -74.06 -0.67 -5.11 16 40 H 0.10 -0.44 7.82 -2.39 -0.02 -0.46 16 41 H 0.39 -1.12 8.74 -74.06 -0.65 -1.76 16 42 H -0.31 -4.03 6.76 99.48 0.67 -3.36 16 43 H -0.27 -1.37 7.11 99.48 0.71 -0.66 16 44 H 0.13 1.30 4.47 -2.91 -0.01 1.28 16 45 H 0.10 -0.28 7.72 -2.39 -0.02 -0.30 16 46 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 47 H 0.14 -0.41 6.66 -2.91 -0.02 -0.43 16 48 H 0.14 -0.44 8.06 -2.91 -0.02 -0.46 16 49 H 0.14 -0.47 8.06 -2.92 -0.02 -0.49 16 50 H 0.14 -0.31 6.30 -2.91 -0.02 -0.32 16 Total: 0.00 -26.24 407.06 -0.73 -26.97 By element: Atomic # 1 Polarization: -18.54 SS G_CDS: -0.92 Total: -19.46 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: 4.35 Total: 7.85 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -2.31 Total: -2.89 kcal Atomic # 8 Polarization: -12.68 SS G_CDS: -3.92 Total: -16.60 kcal Atomic # 14 Polarization: 2.07 SS G_CDS: 2.07 Total: 4.14 kcal Total: -26.24 -0.73 -26.97 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.710 kcal (2) G-P(sol) polarization free energy of solvation -26.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.729 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.965 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.675 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds