Wall clock time and date at job start Sun Mar 7 2021 05:08:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35902 * 117.00378 * 2 1 4 4 C 1.38706 * 120.05954 * 179.97438 * 3 2 1 5 5 C 1.50703 * 120.02568 * 359.95744 * 4 3 2 6 6 H 1.08996 * 112.85169 * 348.79878 * 5 4 3 7 7 C 1.53781 * 113.61417 * 119.99880 * 5 4 3 8 8 C 1.53786 * 87.17350 * 139.93966 * 7 5 4 9 9 H 1.09000 * 113.61138 * 220.06261 * 8 7 5 10 10 N 1.46496 * 113.61518 * 89.15486 * 8 7 5 11 11 C 1.34779 * 119.99390 * 154.99856 * 10 8 7 12 12 O 1.21577 * 120.00628 * 0.02562 * 11 10 8 13 13 C 1.47536 * 119.99231 * 180.02562 * 11 10 8 14 14 C 1.40148 * 120.18789 * 180.02562 * 13 11 10 15 15 O 1.35652 * 120.15106 * 359.95414 * 14 13 11 16 16 C 1.38706 * 119.70051 * 179.97438 * 14 13 11 17 17 C 1.50693 * 119.95765 * 180.02562 * 16 14 13 18 18 O 1.42902 * 109.47132 * 284.99495 * 17 16 14 19 19 Si 1.86302 * 109.47130 * 164.99777 * 17 16 14 20 20 C 1.38058 * 120.08508 * 0.02562 * 16 14 13 21 21 C 1.38552 * 120.38904 * 359.95645 * 20 16 14 22 22 C 1.50699 * 119.85142 * 180.02562 * 21 20 16 23 23 C 1.37794 * 120.29888 * 359.78585 * 21 20 16 24 24 C 1.53782 * 113.61283 * 217.49695 * 5 4 3 25 25 C 1.38164 * 119.94595 * 180.23357 * 4 3 2 26 26 C 1.38248 * 120.05656 * 359.51289 * 25 4 3 27 27 C 1.38288 * 120.10514 * 0.46578 * 26 25 4 28 28 C 1.38126 * 120.06226 * 359.79267 * 27 26 25 29 29 H 1.09000 * 109.47009 * 59.99425 * 1 2 3 30 30 H 1.08992 * 109.47399 * 180.02562 * 1 2 3 31 31 H 1.09000 * 109.46891 * 300.00358 * 1 2 3 32 32 H 1.09002 * 113.61445 * 254.52965 * 7 5 4 33 33 H 1.09002 * 113.61408 * 25.34696 * 7 5 4 34 34 H 0.97001 * 120.00117 * 335.00621 * 10 8 7 35 35 H 0.96694 * 114.00116 * 89.99706 * 15 14 13 36 36 H 1.09000 * 109.47741 * 44.99849 * 17 16 14 37 37 H 0.96703 * 114.00067 * 300.00351 * 18 17 16 38 38 H 1.48507 * 110.00016 * 58.67965 * 19 17 16 39 39 H 1.48498 * 110.00143 * 179.97438 * 19 17 16 40 40 H 1.07995 * 119.80798 * 179.97438 * 20 16 14 41 41 H 1.08994 * 109.47090 * 90.00265 * 22 21 20 42 42 H 1.09001 * 109.47212 * 210.00346 * 22 21 20 43 43 H 1.09005 * 109.46806 * 329.99633 * 22 21 20 44 44 H 1.08000 * 120.04621 * 180.25013 * 23 21 20 45 45 H 1.08997 * 113.61668 * 334.56418 * 24 5 4 46 46 H 1.08994 * 113.61387 * 105.47152 * 24 5 4 47 47 H 1.08001 * 119.97593 * 179.75036 * 25 4 3 48 48 H 1.07996 * 119.94571 * 180.21291 * 26 25 4 49 49 H 1.08005 * 119.97004 * 179.76334 * 27 26 25 50 50 H 1.08000 * 120.02987 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0221 0.0021 6 1 3.6591 -0.8702 0.1978 7 6 5.1808 -0.1107 -1.2177 8 6 6.2427 -0.6671 -0.2544 9 1 7.2510 -0.3092 -0.4623 10 7 6.1770 -2.1207 -0.0847 11 6 7.2768 -2.8062 0.2854 12 8 8.3233 -2.2183 0.4787 13 6 7.2108 -4.2702 0.4557 14 6 8.3518 -4.9870 0.8409 15 8 9.5231 -4.3381 1.0581 16 6 8.2782 -6.3631 0.9986 17 6 9.5014 -7.1395 1.4132 18 8 10.3944 -7.2499 0.3030 19 14 8.9953 -8.8423 1.9746 20 6 7.0857 -7.0224 0.7763 21 6 5.9554 -6.3173 0.3958 22 6 4.6599 -7.0491 0.1569 23 6 6.0092 -4.9493 0.2396 24 6 5.5263 0.1169 0.8603 25 6 4.0560 2.5170 0.0054 26 6 3.3020 3.6758 -0.0004 27 6 1.9210 3.6047 -0.0014 28 6 1.2914 2.3753 -0.0009 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 4.8342 -0.8374 -1.9524 33 1 5.4543 0.8452 -1.6643 34 1 5.3420 -2.5898 -0.2387 35 1 9.6447 -4.0406 1.9701 36 1 10.0011 -6.6209 2.2313 37 1 10.0154 -7.7021 -0.4632 38 1 8.2847 -9.5484 0.8783 39 1 10.1928 -9.6184 2.3856 40 1 7.0336 -8.0939 0.9001 41 1 4.0939 -7.0989 1.0870 42 1 4.0763 -6.5186 -0.5955 43 1 4.8725 -8.0590 -0.1938 44 1 5.1247 -4.4032 -0.0532 45 1 5.8955 1.1351 0.9826 46 1 5.4586 -0.4260 1.8029 47 1 5.1344 2.5752 0.0099 48 1 3.7924 4.6380 -0.0001 49 1 1.3340 4.5114 -0.0021 50 1 0.2128 2.3204 -0.0013 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13422088.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:02 Heat of formation + Delta-G solvation = -60.672985 kcal Electronic energy + Delta-G solvation = -33199.659348 eV Core-core repulsion = 28739.029374 eV Total energy + Delta-G solvation = -4460.629974 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -41.91384 -41.43171 -40.39375 -39.10266 -38.08696 -37.94743 -37.60404 -34.62110 -33.10934 -32.84846 -31.58126 -31.07704 -28.28896 -27.67227 -26.82354 -26.70398 -26.43253 -24.90356 -23.14526 -22.61199 -22.01039 -21.51606 -20.14101 -19.52509 -19.13110 -18.40667 -17.90374 -17.44832 -17.29353 -16.79253 -16.74818 -16.71565 -16.50793 -16.02996 -15.81976 -15.68978 -15.39715 -15.32564 -15.07526 -14.87932 -14.69446 -14.62810 -14.30987 -14.22637 -13.99755 -13.63482 -13.51937 -13.37580 -13.15062 -13.06760 -13.05103 -12.82539 -12.60659 -12.32421 -12.22515 -12.09771 -11.78919 -11.73058 -11.67663 -11.65034 -11.15209 -10.85102 -10.46478 -10.18322 -9.97933 -9.75849 -9.51869 -9.07114 -5.02609 -0.32670 0.05969 0.34542 0.49748 1.21049 1.50678 1.79177 1.90978 2.09042 2.29551 2.59809 2.76289 3.18913 3.32550 3.46836 3.49330 3.58310 3.65228 3.66441 3.73380 3.87018 3.97162 4.04336 4.05633 4.10081 4.14464 4.17079 4.19408 4.27521 4.40887 4.43427 4.44140 4.52156 4.55987 4.56311 4.65379 4.69413 4.71064 4.74382 4.85694 4.92101 4.94004 4.96327 5.01609 5.07284 5.15228 5.20354 5.31091 5.39571 5.48984 5.57463 5.59844 5.67793 5.81814 6.40970 6.43503 6.50469 6.79031 7.27738 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.101 0.899 7 C -0.136 4.136 8 C 0.121 3.879 9 H 0.106 0.894 10 N -0.711 5.711 11 C 0.562 3.438 12 O -0.515 6.515 13 C -0.164 4.164 14 C 0.192 3.808 15 O -0.467 6.467 16 C -0.151 4.151 17 C -0.065 4.065 18 O -0.519 6.519 19 Si 0.688 3.312 20 C -0.081 4.081 21 C -0.097 4.097 22 C -0.117 4.117 23 C -0.066 4.066 24 C -0.144 4.144 25 C -0.080 4.080 26 C -0.154 4.154 27 C -0.084 4.084 28 C -0.207 4.207 29 H 0.055 0.945 30 H 0.101 0.899 31 H 0.055 0.945 32 H 0.075 0.925 33 H 0.098 0.902 34 H 0.399 0.601 35 H 0.395 0.605 36 H 0.116 0.884 37 H 0.374 0.626 38 H -0.259 1.259 39 H -0.255 1.255 40 H 0.136 0.864 41 H 0.077 0.923 42 H 0.070 0.930 43 H 0.070 0.930 44 H 0.131 0.869 45 H 0.095 0.905 46 H 0.074 0.926 47 H 0.130 0.870 48 H 0.125 0.875 49 H 0.124 0.876 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.050 -1.123 1.754 8.315 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.103 4.103 5 C -0.081 4.081 6 H 0.120 0.880 7 C -0.174 4.174 8 C 0.016 3.984 9 H 0.124 0.876 10 N -0.363 5.363 11 C 0.349 3.651 12 O -0.391 6.391 13 C -0.167 4.167 14 C 0.145 3.855 15 O -0.278 6.278 16 C -0.152 4.152 17 C -0.175 4.175 18 O -0.325 6.325 19 Si 0.590 3.410 20 C -0.099 4.099 21 C -0.097 4.097 22 C -0.173 4.173 23 C -0.085 4.085 24 C -0.182 4.182 25 C -0.098 4.098 26 C -0.172 4.172 27 C -0.102 4.102 28 C -0.226 4.226 29 H 0.074 0.926 30 H 0.119 0.881 31 H 0.074 0.926 32 H 0.094 0.906 33 H 0.116 0.884 34 H 0.235 0.765 35 H 0.253 0.747 36 H 0.134 0.866 37 H 0.221 0.779 38 H -0.184 1.184 39 H -0.180 1.180 40 H 0.153 0.847 41 H 0.096 0.904 42 H 0.089 0.911 43 H 0.089 0.911 44 H 0.149 0.851 45 H 0.113 0.887 46 H 0.092 0.908 47 H 0.148 0.852 48 H 0.143 0.857 49 H 0.142 0.858 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -6.616 -1.532 1.582 6.973 hybrid contribution -0.728 0.305 -0.823 1.141 sum -7.344 -1.227 0.759 7.484 Atomic orbital electron populations 1.23076 0.78235 1.04102 1.01434 1.86039 1.21393 1.26818 1.88651 1.18855 0.91798 0.84256 0.96656 1.19034 0.90107 0.95361 1.05845 1.21395 0.93983 0.95819 0.96929 0.88047 1.23440 0.95319 1.02228 0.96416 1.21872 1.00482 0.79578 0.96504 0.87552 1.45581 1.12727 1.07407 1.70590 1.18014 0.83616 0.86393 0.77045 1.90835 1.29060 1.70083 1.49105 1.20379 0.94445 0.93557 1.08361 1.18218 0.84351 0.89007 0.93968 1.84802 1.33528 1.75512 1.33957 1.20641 0.96264 0.93989 1.04305 1.24905 0.90753 1.09160 0.92697 1.86683 1.40376 1.80084 1.25332 0.95138 0.83462 0.74942 0.87495 1.21167 0.91557 1.00268 0.96935 1.19787 0.96129 0.93410 1.00394 1.20834 0.93596 1.00247 1.02664 1.21137 0.96213 0.93997 0.97182 1.23617 0.95158 1.01334 0.98141 1.20890 1.00079 0.91014 0.97815 1.21088 0.93935 0.98527 1.03645 1.20980 0.94788 0.97048 0.97354 1.21264 1.00106 0.92432 1.08766 0.92596 0.88106 0.92607 0.90621 0.88388 0.76517 0.74710 0.86584 0.77918 1.18404 1.17977 0.84652 0.90435 0.91084 0.91126 0.85141 0.88686 0.90764 0.85200 0.85747 0.85767 0.85478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.32 9.43 -19.43 -0.18 -0.50 16 3 C 0.13 0.20 6.66 -39.22 -0.26 -0.06 16 4 C -0.10 -0.11 5.30 -104.47 -0.55 -0.66 16 5 C -0.06 0.02 3.76 -90.96 -0.34 -0.33 16 6 H 0.10 -0.01 7.33 -51.93 -0.38 -0.39 16 7 C -0.14 0.11 7.29 -25.92 -0.19 -0.08 16 8 C 0.12 0.04 4.33 -67.02 -0.29 -0.25 16 9 H 0.11 0.21 7.47 -51.93 -0.39 -0.18 16 10 N -0.71 -0.21 5.22 -53.97 -0.28 -0.49 16 11 C 0.56 1.77 7.76 -12.47 -0.10 1.67 16 12 O -0.52 -3.48 14.76 -16.58 -0.24 -3.72 16 13 C -0.16 -0.29 5.89 -104.84 -0.62 -0.91 16 14 C 0.19 0.47 6.69 -38.69 -0.26 0.21 16 15 O -0.47 -1.74 10.91 -40.53 -0.44 -2.18 16 16 C -0.15 -0.09 5.27 -104.52 -0.55 -0.64 16 17 C -0.07 -0.02 2.38 36.00 0.09 0.06 16 18 O -0.52 -1.37 12.88 -35.23 -0.45 -1.82 16 19 Si 0.69 -0.84 30.24 -169.99 -5.14 -5.98 16 20 C -0.08 0.07 8.30 -39.53 -0.33 -0.26 16 21 C -0.10 0.12 5.87 -104.67 -0.61 -0.49 16 22 C -0.12 0.39 10.00 36.01 0.36 0.75 16 23 C -0.07 0.05 9.18 -39.20 -0.36 -0.31 16 24 C -0.14 0.03 7.26 -25.82 -0.19 -0.16 16 25 C -0.08 -0.03 8.62 -39.60 -0.34 -0.37 16 26 C -0.15 -0.05 10.04 -39.56 -0.40 -0.45 16 27 C -0.08 -0.04 10.04 -39.60 -0.40 -0.43 16 28 C -0.21 -0.16 9.04 -39.43 -0.36 -0.52 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 32 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.10 -0.11 7.73 -51.93 -0.40 -0.51 16 34 H 0.40 -0.81 6.73 -40.82 -0.27 -1.08 16 35 H 0.39 -0.01 9.06 45.56 0.41 0.41 16 36 H 0.12 -0.04 7.83 -51.93 -0.41 -0.44 16 37 H 0.37 -0.14 8.70 45.56 0.40 0.26 16 38 H -0.26 -0.03 6.68 56.52 0.38 0.35 16 39 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 40 H 0.14 -0.31 4.83 -52.49 -0.25 -0.57 16 41 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 42 H 0.07 -0.28 8.08 -51.93 -0.42 -0.70 16 43 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 44 H 0.13 -0.43 6.40 -52.49 -0.34 -0.77 16 45 H 0.09 -0.07 6.30 -51.93 -0.33 -0.39 16 46 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 47 H 0.13 -0.16 6.64 -52.49 -0.35 -0.51 16 48 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 49 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 50 H 0.13 -0.12 6.30 -52.49 -0.33 -0.45 16 LS Contribution 406.21 15.07 6.12 6.12 Total: 0.00 -9.99 406.21 -11.36 -21.35 By element: Atomic # 1 Polarization: -4.44 SS G_CDS: -6.03 Total: -10.48 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -4.70 Total: -2.30 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -0.28 Total: -0.49 kcal Atomic # 8 Polarization: -6.90 SS G_CDS: -1.32 Total: -8.23 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.14 Total: -5.98 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.99 -11.36 -21.35 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13422088.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.320 kcal (2) G-P(sol) polarization free energy of solvation -9.992 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.360 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.353 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.673 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds