Wall clock time and date at job start Sun Mar 7 2021 05:08:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35895 * 117.00128 * 2 1 4 4 C 1.38709 * 120.05826 * 180.02562 * 3 2 1 5 5 C 1.50705 * 120.02672 * 359.96119 * 4 3 2 6 6 H 1.08996 * 112.84574 * 348.82060 * 5 4 3 7 7 C 1.53773 * 113.61599 * 120.02136 * 5 4 3 8 8 C 1.53778 * 87.08243 * 139.98081 * 7 5 4 9 9 H 1.08998 * 113.61495 * 220.01984 * 8 7 5 10 10 N 1.46500 * 113.61523 * 89.19781 * 8 7 5 11 11 C 1.34776 * 119.99738 * 155.00226 * 10 8 7 12 12 O 1.21616 * 120.00289 * 359.97438 * 11 10 8 13 13 C 1.47379 * 119.99636 * 179.97438 * 11 10 8 14 14 C 1.36414 * 127.19805 * 0.02562 * 13 11 10 15 15 O 1.33651 * 108.40009 * 179.97438 * 14 13 11 16 16 C 1.34214 * 110.90938 * 0.02562 * 15 14 13 17 17 C 1.50698 * 125.43805 * 180.02562 * 16 15 14 18 18 O 1.42898 * 109.46977 * 244.97457 * 17 16 15 19 19 Si 1.86298 * 109.46921 * 4.97276 * 17 16 15 20 20 C 1.34178 * 109.12458 * 359.74523 * 16 15 14 21 21 C 1.53784 * 87.08160 * 334.56417 * 8 7 5 22 22 C 1.38164 * 119.94688 * 179.97438 * 4 3 2 23 23 C 1.38245 * 120.05645 * 0.02562 * 22 4 3 24 24 C 1.38290 * 120.10982 * 359.97438 * 23 22 4 25 25 C 1.38126 * 120.05768 * 0.02562 * 24 23 22 26 26 H 1.09000 * 109.46735 * 300.00020 * 1 2 3 27 27 H 1.09002 * 109.46782 * 59.99820 * 1 2 3 28 28 H 1.08997 * 109.46965 * 179.97438 * 1 2 3 29 29 H 1.09003 * 113.61493 * 254.53067 * 7 5 4 30 30 H 1.09001 * 113.61758 * 25.43238 * 7 5 4 31 31 H 0.96996 * 120.00080 * 334.99931 * 10 8 7 32 32 H 1.08001 * 125.79515 * 359.96668 * 14 13 11 33 33 H 1.08994 * 109.47217 * 124.97016 * 17 16 15 34 34 H 0.96701 * 114.00233 * 60.00074 * 18 17 16 35 35 H 1.48507 * 109.99873 * 179.97438 * 19 17 16 36 36 H 1.48501 * 110.00361 * 301.32168 * 19 17 16 37 37 H 1.08000 * 127.02397 * 180.25929 * 20 16 15 38 38 H 1.09001 * 113.61615 * 270.88681 * 21 8 7 39 39 H 1.08999 * 113.61679 * 139.97764 * 21 8 7 40 40 H 1.08005 * 119.97654 * 179.97438 * 22 4 3 41 41 H 1.07995 * 119.94685 * 179.72562 * 23 22 4 42 42 H 1.07995 * 119.97112 * 180.02562 * 24 23 22 43 43 H 1.07998 * 120.03163 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.2538 0.0221 -0.0002 6 1 3.6592 -0.8703 0.1951 7 6 5.1802 -0.1099 -1.2204 8 6 6.2406 -0.6676 -0.2564 9 1 7.2496 -0.3110 -0.4634 10 7 6.1742 -2.1214 -0.0883 11 6 7.2733 -2.8077 0.2825 12 8 8.3202 -2.2202 0.4772 13 6 7.2063 -4.2702 0.4522 14 6 6.1174 -5.0721 0.2736 15 8 6.4768 -6.3342 0.5271 16 6 7.7724 -6.4035 0.8706 17 6 8.5167 -7.6656 1.2229 18 8 8.9238 -7.6122 2.5916 19 14 7.4029 -9.1363 0.9633 20 6 8.3007 -5.1704 0.8442 21 6 5.5268 0.1165 0.8575 22 6 4.0560 2.5170 -0.0011 23 6 3.3020 3.6758 -0.0005 24 6 1.9209 3.6047 0.0000 25 6 1.2914 2.3753 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 4.8334 -0.8361 -1.9556 30 1 5.4548 0.8464 -1.6657 31 1 5.3393 -2.5900 -0.2439 32 1 5.1322 -4.7430 -0.0222 33 1 9.3959 -7.7588 0.5856 34 1 8.1910 -7.5291 3.2170 35 1 8.1254 -10.3875 1.3067 36 1 6.1850 -9.0057 1.8029 37 1 9.3210 -4.8951 1.0671 38 1 5.8960 1.1347 0.9803 39 1 5.4595 -0.4271 1.7999 40 1 5.1345 2.5752 -0.0011 41 1 3.7923 4.6380 0.0035 42 1 1.3341 4.5113 0.0000 43 1 0.2128 2.3203 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13456056.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:20 Heat of formation + Delta-G solvation = -26.650712 kcal Electronic energy + Delta-G solvation = -27152.700555 eV Core-core repulsion = 23132.847277 eV Total energy + Delta-G solvation = -4019.853279 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.135 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -43.71776 -41.73328 -40.67172 -39.20428 -38.15047 -38.04657 -34.69997 -33.79898 -32.16054 -31.41926 -31.08729 -28.30257 -26.92442 -26.73119 -26.27050 -24.78662 -23.12402 -22.56247 -22.27650 -21.06062 -20.16708 -19.36954 -19.08074 -17.85506 -17.58486 -17.53644 -17.22958 -16.86236 -16.73641 -16.66756 -16.16441 -15.96080 -15.63646 -15.41447 -15.28718 -15.06929 -14.64062 -14.30935 -14.16310 -14.03438 -13.92059 -13.61343 -13.50157 -13.17302 -13.07548 -12.95823 -12.84067 -12.34017 -12.11025 -12.08617 -11.77045 -11.69317 -11.18112 -11.03508 -10.88766 -10.75024 -10.09283 -9.82143 -9.76694 -9.08284 -5.01037 0.23469 0.33441 0.48676 0.89851 1.11380 1.47078 1.70949 1.91172 2.04361 2.28373 2.35756 2.75078 3.13241 3.36695 3.45010 3.57960 3.63726 3.69955 3.85375 3.91717 3.95597 4.03626 4.13194 4.16207 4.17823 4.28323 4.38151 4.39801 4.42410 4.51283 4.58316 4.63898 4.67901 4.72515 4.77478 4.85701 4.92122 5.00060 5.06017 5.14991 5.22814 5.38372 5.46695 5.57863 5.64983 5.80636 5.82606 6.22432 6.39755 6.46109 7.22858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.101 0.899 7 C -0.135 4.135 8 C 0.121 3.879 9 H 0.107 0.893 10 N -0.710 5.710 11 C 0.591 3.409 12 O -0.529 6.529 13 C -0.237 4.237 14 C 0.033 3.967 15 O -0.166 6.166 16 C -0.057 4.057 17 C -0.035 4.035 18 O -0.520 6.520 19 Si 0.704 3.296 20 C -0.122 4.122 21 C -0.145 4.145 22 C -0.080 4.080 23 C -0.154 4.154 24 C -0.083 4.083 25 C -0.207 4.207 26 H 0.055 0.945 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.076 0.924 30 H 0.098 0.902 31 H 0.399 0.601 32 H 0.214 0.786 33 H 0.138 0.862 34 H 0.380 0.620 35 H -0.249 1.249 36 H -0.256 1.256 37 H 0.162 0.838 38 H 0.095 0.905 39 H 0.074 0.926 40 H 0.130 0.870 41 H 0.125 0.875 42 H 0.124 0.876 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.028 -0.434 -2.840 6.678 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.173 4.173 8 C 0.016 3.984 9 H 0.125 0.875 10 N -0.361 5.361 11 C 0.378 3.622 12 O -0.406 6.406 13 C -0.242 4.242 14 C -0.038 4.038 15 O -0.062 6.062 16 C -0.106 4.106 17 C -0.145 4.145 18 O -0.327 6.327 19 Si 0.603 3.397 20 C -0.141 4.141 21 C -0.183 4.183 22 C -0.098 4.098 23 C -0.172 4.172 24 C -0.102 4.102 25 C -0.226 4.226 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.119 0.881 29 H 0.095 0.905 30 H 0.117 0.883 31 H 0.233 0.767 32 H 0.230 0.770 33 H 0.155 0.845 34 H 0.229 0.771 35 H -0.174 1.174 36 H -0.180 1.180 37 H 0.180 0.820 38 H 0.114 0.886 39 H 0.092 0.908 40 H 0.148 0.852 41 H 0.143 0.857 42 H 0.142 0.858 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -5.152 -1.214 -2.600 5.897 hybrid contribution -0.899 0.899 1.018 1.629 sum -6.051 -0.314 -1.582 6.262 Atomic orbital electron populations 1.23080 0.78213 1.04112 1.01446 1.86035 1.21412 1.26823 1.88653 1.18856 0.91800 0.84259 0.96653 1.19032 0.90103 0.95361 1.05901 1.21405 0.93982 0.95849 0.96917 0.88032 1.23439 0.95234 1.02254 0.96379 1.21849 1.00594 0.79393 0.96593 0.87501 1.45490 1.12499 1.07518 1.70607 1.17252 0.83500 0.85199 0.76209 1.90821 1.29561 1.70174 1.50025 1.21517 0.95216 0.94246 1.13181 1.24476 0.99422 0.80603 0.99310 1.83692 1.26561 1.29321 1.66622 1.22671 0.82050 0.98291 1.07540 1.24397 1.04838 0.99322 0.85900 1.86680 1.36560 1.95085 1.14353 0.94448 0.77549 0.75794 0.91885 1.22549 1.00103 0.90021 1.01462 1.23596 0.95182 1.01387 0.98180 1.20888 1.00078 0.91014 0.97811 1.21088 0.93935 0.98535 1.03634 1.20982 0.94793 0.97053 0.97324 1.21266 1.00115 0.92433 1.08752 0.92606 0.92574 0.88101 0.90519 0.88332 0.76677 0.76988 0.84450 0.77113 1.17354 1.18004 0.82015 0.88620 0.90757 0.85192 0.85738 0.85758 0.85473 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.28 9.43 -19.41 -0.18 -0.46 16 3 C 0.13 0.19 6.66 -39.21 -0.26 -0.07 16 4 C -0.10 -0.09 5.30 -104.47 -0.55 -0.64 16 5 C -0.06 0.03 3.75 -90.96 -0.34 -0.31 16 6 H 0.10 -0.05 7.32 -51.93 -0.38 -0.43 16 7 C -0.14 0.19 7.29 -25.92 -0.19 0.00 16 8 C 0.12 -0.01 4.32 -67.12 -0.29 -0.30 16 9 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 10 N -0.71 0.26 5.26 -54.10 -0.28 -0.02 16 11 C 0.59 1.69 7.81 -12.54 -0.10 1.59 16 12 O -0.53 -3.76 16.58 5.26 0.09 -3.67 16 13 C -0.24 -0.32 6.31 -103.27 -0.65 -0.98 16 14 C 0.03 -0.05 11.61 30.07 0.35 0.30 16 15 O -0.17 0.05 8.90 7.66 0.07 0.12 16 16 C -0.06 -0.02 6.18 -35.74 -0.22 -0.25 16 17 C -0.04 0.02 2.97 36.00 0.11 0.13 16 18 O -0.52 -0.38 12.88 -35.23 -0.45 -0.83 16 19 Si 0.70 -1.01 32.09 -169.99 -5.46 -6.46 16 20 C -0.12 -0.25 10.90 -37.45 -0.41 -0.66 16 21 C -0.14 0.04 7.26 -25.91 -0.19 -0.15 16 22 C -0.08 -0.02 8.61 -39.61 -0.34 -0.36 16 23 C -0.15 -0.04 10.04 -39.56 -0.40 -0.44 16 24 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 25 C -0.21 -0.15 9.04 -39.43 -0.36 -0.50 16 26 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 27 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 28 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 29 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.10 -0.16 7.72 -51.93 -0.40 -0.56 16 31 H 0.40 -1.30 7.67 -40.82 -0.31 -1.62 16 32 H 0.21 -1.28 7.47 -52.49 -0.39 -1.67 16 33 H 0.14 -0.27 7.96 -51.93 -0.41 -0.69 16 34 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 35 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 36 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 37 H 0.16 0.41 8.06 -52.49 -0.42 -0.02 16 38 H 0.10 -0.08 6.31 -51.93 -0.33 -0.40 16 39 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 40 H 0.13 -0.19 6.66 -52.48 -0.35 -0.54 16 41 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 42 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 43 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 LS Contribution 364.78 15.07 5.50 5.50 Total: 0.00 -9.37 364.78 -9.40 -18.77 By element: Atomic # 1 Polarization: -5.38 SS G_CDS: -5.43 Total: -10.81 kcal Atomic # 6 Polarization: 1.12 SS G_CDS: -3.25 Total: -2.12 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -0.28 Total: -0.02 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -0.48 Total: -4.85 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.46 Total: -6.46 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.37 -9.40 -18.77 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13456056.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.879 kcal (2) G-P(sol) polarization free energy of solvation -9.371 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.771 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds