Wall clock time and date at job start Sun Mar 7 2021 05:08:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35899 * 116.99618 * 2 1 4 4 C 1.38713 * 120.05070 * 179.97438 * 3 2 1 5 5 C 1.50703 * 120.03055 * 359.95653 * 4 3 2 6 6 H 1.08996 * 112.84852 * 348.80363 * 5 4 3 7 7 C 1.53785 * 113.61295 * 119.99704 * 5 4 3 8 8 C 1.53787 * 87.07759 * 139.98188 * 7 5 4 9 9 H 1.09001 * 113.61008 * 219.93460 * 8 7 5 10 10 N 1.46498 * 113.61307 * 89.11550 * 8 7 5 11 11 C 1.34781 * 119.99908 * 154.99975 * 10 8 7 12 12 O 1.21697 * 119.99706 * 359.97438 * 11 10 8 13 13 C 1.46678 * 119.99776 * 179.97438 * 11 10 8 14 14 C 1.37871 * 126.22768 * 179.97438 * 13 11 10 15 15 C 1.50703 * 126.46149 * 0.02562 * 14 13 11 16 16 C 1.39834 * 107.08165 * 179.97438 * 14 13 11 17 17 C 1.35452 * 107.86685 * 0.02562 * 16 14 13 18 18 C 1.50707 * 125.56378 * 180.26073 * 17 16 14 19 19 O 1.42902 * 109.46855 * 244.68711 * 18 17 16 20 20 Si 1.86294 * 109.47192 * 4.69146 * 18 17 16 21 21 N 1.35535 * 108.86987 * 359.97438 * 17 16 14 22 22 C 1.53780 * 113.61251 * 217.49581 * 5 4 3 23 23 C 1.38164 * 119.94283 * 180.22805 * 4 3 2 24 24 C 1.38253 * 120.05387 * 359.47392 * 23 4 3 25 25 C 1.38286 * 120.10903 * 0.55261 * 24 23 4 26 26 C 1.38120 * 120.05513 * 359.69930 * 25 24 23 27 27 H 1.08998 * 109.47416 * 60.00187 * 1 2 3 28 28 H 1.09005 * 109.47171 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.47383 * 300.00270 * 1 2 3 30 30 H 1.08997 * 113.61547 * 25.43931 * 7 5 4 31 31 H 1.08995 * 113.61323 * 254.52887 * 7 5 4 32 32 H 0.96998 * 120.00415 * 335.00336 * 10 8 7 33 33 H 1.09005 * 109.46906 * 89.99125 * 15 14 13 34 34 H 1.09003 * 109.47104 * 209.99482 * 15 14 13 35 35 H 1.09001 * 109.46845 * 329.99714 * 15 14 13 36 36 H 1.08002 * 126.06982 * 180.02562 * 16 14 13 37 37 H 1.09002 * 109.46617 * 124.68958 * 18 17 16 38 38 H 0.96701 * 113.99332 * 60.00491 * 19 18 17 39 39 H 1.48502 * 110.00182 * 58.67654 * 20 18 17 40 40 H 1.48498 * 110.00173 * 180.02562 * 20 18 17 41 41 H 0.97003 * 125.67591 * 180.02562 * 21 17 16 42 42 H 1.08995 * 113.61334 * 105.47142 * 22 5 4 43 43 H 1.09001 * 113.61466 * 334.56324 * 22 5 4 44 44 H 1.08001 * 119.97683 * 179.74459 * 23 4 3 45 45 H 1.08000 * 119.94026 * 180.29366 * 24 23 4 46 46 H 1.08003 * 119.96811 * 179.72661 * 25 24 23 47 47 H 1.08005 * 120.02681 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0221 0.0021 6 1 3.6591 -0.8701 0.1977 7 6 5.1808 -0.1106 -1.2177 8 6 6.2407 -0.6676 -0.2527 9 1 7.2500 -0.3123 -0.4605 10 7 6.1730 -2.1211 -0.0822 11 6 7.2715 -2.8078 0.2898 12 8 8.3196 -2.2205 0.4835 13 6 7.2035 -4.2630 0.4610 14 6 8.2423 -5.0888 0.8351 15 6 9.6555 -4.6664 1.1441 16 6 7.7370 -6.3921 0.8749 17 6 6.4278 -6.3409 0.5315 18 6 5.4957 -7.5225 0.4515 19 8 5.0720 -7.7041 -0.9011 20 14 6.3822 -9.0533 1.0355 21 7 6.0912 -5.0527 0.2778 22 6 5.5263 0.1171 0.8603 23 6 4.0559 2.5171 0.0053 24 6 3.3018 3.6758 -0.0015 25 6 1.9208 3.6047 -0.0015 26 6 1.2914 2.3753 -0.0010 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 5.4556 0.8454 -1.6634 31 1 4.8343 -0.8373 -1.9524 32 1 5.3377 -2.5892 -0.2370 33 1 9.7421 -4.4367 2.2062 34 1 10.3403 -5.4756 0.8903 35 1 9.9062 -3.7813 0.5594 36 1 8.2922 -7.2817 1.1335 37 1 4.6261 -7.3426 1.0836 38 1 5.7956 -7.8689 -1.5211 39 1 6.8559 -8.8650 2.4303 40 1 5.4740 -10.2258 0.9609 41 1 5.2126 -4.7395 0.0115 42 1 5.4587 -0.4258 1.8030 43 1 5.8954 1.1354 0.9825 44 1 5.1343 2.5753 0.0099 45 1 3.7922 4.6381 -0.0025 46 1 1.3339 4.5114 -0.0023 47 1 0.2127 2.3203 -0.0014 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_13940406.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:23 Heat of formation + Delta-G solvation = -7.919008 kcal Electronic energy + Delta-G solvation = -29437.080382 eV Core-core repulsion = 25360.220414 eV Total energy + Delta-G solvation = -4076.859968 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -42.58169 -41.68550 -40.56143 -39.16641 -38.08150 -37.75623 -34.78860 -33.38537 -32.13742 -31.32117 -31.09966 -28.33094 -28.12663 -27.18820 -26.75373 -25.86634 -23.42200 -22.87927 -22.37487 -21.57158 -20.54096 -20.01486 -19.54068 -19.09051 -18.11319 -17.44731 -17.00729 -16.78750 -16.74027 -16.65843 -16.23415 -15.94368 -15.47462 -15.38374 -15.32715 -15.12981 -14.87276 -14.64682 -14.38491 -14.26066 -14.02710 -13.88433 -13.56628 -13.52099 -13.44086 -13.16552 -13.08797 -12.88227 -12.84963 -12.35311 -12.15940 -12.12174 -12.00835 -11.78324 -11.70978 -11.19538 -10.96933 -10.70882 -10.14248 -9.79481 -9.78869 -9.13704 -9.09432 -5.05670 0.32048 0.39447 0.47498 1.12345 1.54793 1.64785 1.84918 2.02092 2.17760 2.27228 2.38728 2.73794 3.29380 3.41662 3.53234 3.61878 3.66093 3.82064 3.85684 3.93627 4.01915 4.11651 4.15023 4.16143 4.17767 4.19244 4.37496 4.38412 4.40966 4.50051 4.61334 4.65689 4.70517 4.76777 4.79534 4.85423 4.91066 4.97661 5.04566 5.05318 5.11826 5.24827 5.36973 5.40302 5.48088 5.56087 5.62080 5.69577 5.79434 5.93500 6.26349 6.38107 6.38531 6.47579 7.18128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.103 4.103 5 C -0.064 4.064 6 H 0.100 0.900 7 C -0.135 4.135 8 C 0.122 3.878 9 H 0.109 0.891 10 N -0.715 5.715 11 C 0.593 3.407 12 O -0.520 6.520 13 C -0.056 4.056 14 C -0.063 4.063 15 C -0.093 4.093 16 C -0.200 4.200 17 C 0.026 3.974 18 C -0.055 4.055 19 O -0.543 6.543 20 Si 0.721 3.279 21 N -0.524 5.524 22 C -0.144 4.144 23 C -0.080 4.080 24 C -0.153 4.153 25 C -0.083 4.083 26 C -0.207 4.207 27 H 0.056 0.944 28 H 0.100 0.900 29 H 0.056 0.944 30 H 0.099 0.901 31 H 0.075 0.925 32 H 0.394 0.606 33 H 0.069 0.931 34 H 0.066 0.934 35 H 0.081 0.919 36 H 0.151 0.849 37 H 0.114 0.886 38 H 0.383 0.617 39 H -0.253 1.253 40 H -0.253 1.253 41 H 0.416 0.584 42 H 0.073 0.927 43 H 0.096 0.904 44 H 0.131 0.869 45 H 0.125 0.875 46 H 0.125 0.875 47 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.425 -0.736 -1.856 3.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.118 0.882 7 C -0.173 4.173 8 C 0.017 3.983 9 H 0.127 0.873 10 N -0.366 5.366 11 C 0.382 3.618 12 O -0.395 6.395 13 C -0.169 4.169 14 C -0.072 4.072 15 C -0.150 4.150 16 C -0.225 4.225 17 C -0.093 4.093 18 C -0.165 4.165 19 O -0.349 6.349 20 Si 0.620 3.380 21 N -0.121 5.121 22 C -0.183 4.183 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.101 4.101 26 C -0.225 4.225 27 H 0.075 0.925 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.117 0.883 31 H 0.093 0.907 32 H 0.228 0.772 33 H 0.087 0.913 34 H 0.085 0.915 35 H 0.100 0.900 36 H 0.168 0.832 37 H 0.132 0.868 38 H 0.232 0.768 39 H -0.177 1.177 40 H -0.178 1.178 41 H 0.254 0.746 42 H 0.092 0.908 43 H 0.115 0.885 44 H 0.148 0.852 45 H 0.143 0.857 46 H 0.143 0.857 47 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.286 -0.955 -0.913 2.640 hybrid contribution -1.876 0.762 -0.070 2.026 sum -4.161 -0.193 -0.982 4.280 Atomic orbital electron populations 1.23080 0.78202 1.04107 1.01467 1.86038 1.21432 1.26852 1.88658 1.18860 0.91812 0.84264 0.96668 1.19027 0.90098 0.95342 1.05938 1.21397 0.94009 0.95824 0.96951 0.88224 1.23444 0.95279 1.02262 0.96364 1.21853 1.00635 0.79289 0.96551 0.87317 1.45568 1.12438 1.07733 1.70855 1.17018 0.83720 0.84567 0.76542 1.90838 1.29100 1.68959 1.50633 1.20218 0.88421 0.90740 1.17522 1.19939 0.95367 0.91701 1.00172 1.20398 0.90193 1.02235 1.02217 1.20598 0.93248 0.97807 1.10816 1.21101 0.96134 0.85437 1.06580 1.24960 1.01306 1.01852 0.88432 1.86501 1.37404 1.94287 1.16675 0.94003 0.85026 0.75185 0.83757 1.41866 1.11034 1.06357 1.52805 1.23592 0.95143 1.01411 0.98143 1.20888 1.00081 0.90990 0.97814 1.21092 0.93929 0.98534 1.03610 1.20983 0.94801 0.97046 0.97302 1.21262 1.00122 0.92425 1.08734 0.92546 0.88137 0.92578 0.88253 0.90659 0.77183 0.91284 0.91529 0.89987 0.83175 0.86850 0.76849 1.17688 1.17825 0.74647 0.90801 0.88536 0.85169 0.85699 0.85726 0.85465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.45 9.43 -19.42 -0.18 -0.63 16 3 C 0.13 0.24 6.66 -39.22 -0.26 -0.02 16 4 C -0.10 -0.13 5.30 -104.47 -0.55 -0.68 16 5 C -0.06 0.01 3.75 -90.96 -0.34 -0.34 16 6 H 0.10 0.03 7.32 -51.93 -0.38 -0.35 16 7 C -0.14 0.13 7.29 -25.91 -0.19 -0.06 16 8 C 0.12 0.01 4.32 -67.11 -0.29 -0.28 16 9 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 10 N -0.72 -0.11 5.26 -54.32 -0.29 -0.39 16 11 C 0.59 1.74 7.79 -12.85 -0.10 1.64 16 12 O -0.52 -3.14 14.40 5.19 0.07 -3.07 16 13 C -0.06 -0.12 7.06 -81.98 -0.58 -0.69 16 14 C -0.06 -0.15 6.21 -104.16 -0.65 -0.79 16 15 C -0.09 -0.18 9.83 36.01 0.35 0.18 16 16 C -0.20 -0.09 9.27 -39.98 -0.37 -0.46 16 17 C 0.03 -0.01 6.47 -81.95 -0.53 -0.54 16 18 C -0.06 0.08 3.08 36.01 0.11 0.19 16 19 O -0.54 0.61 12.88 -35.23 -0.45 0.16 16 20 Si 0.72 -1.44 30.56 -169.99 -5.19 -6.63 16 21 N -0.52 0.12 5.99 -5.69 -0.03 0.09 16 22 C -0.14 0.01 7.25 -25.92 -0.19 -0.18 16 23 C -0.08 -0.03 8.62 -39.60 -0.34 -0.38 16 24 C -0.15 -0.06 10.04 -39.56 -0.40 -0.46 16 25 C -0.08 -0.05 10.04 -39.61 -0.40 -0.44 16 26 C -0.21 -0.21 9.04 -39.44 -0.36 -0.56 16 27 H 0.06 -0.13 7.66 -51.93 -0.40 -0.52 16 28 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 30 H 0.10 -0.13 7.73 -51.93 -0.40 -0.53 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.39 -0.79 7.83 -40.82 -0.32 -1.11 16 33 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 34 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 35 H 0.08 0.28 6.48 -51.93 -0.34 -0.05 16 36 H 0.15 -0.25 6.19 -52.49 -0.32 -0.57 16 37 H 0.11 -0.14 7.96 -51.93 -0.41 -0.56 16 38 H 0.38 -1.75 8.70 45.56 0.40 -1.36 16 39 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 40 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 41 H 0.42 -0.99 8.19 -40.82 -0.33 -1.33 16 42 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 43 H 0.10 -0.07 6.30 -51.93 -0.33 -0.40 16 44 H 0.13 -0.17 6.64 -52.49 -0.35 -0.52 16 45 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 46 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 47 H 0.13 -0.09 6.30 -52.48 -0.33 -0.42 16 LS Contribution 383.82 15.07 5.78 5.78 Total: 0.00 -8.35 383.82 -10.84 -19.19 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -6.46 Total: -11.56 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -4.09 Total: -2.94 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.32 Total: -0.30 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.56 Total: -3.54 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.19 Total: -6.63 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -8.35 -10.84 -19.19 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_13940406.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.270 kcal (2) G-P(sol) polarization free energy of solvation -8.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds