Wall clock time and date at job start Sun Mar 7 2021 05:08:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35898 * 117.00043 * 2 1 4 4 C 1.38707 * 120.05730 * 179.97438 * 3 2 1 5 5 C 1.50701 * 120.02848 * 0.02562 * 4 3 2 6 6 H 1.09002 * 112.84715 * 9.63531 * 5 4 3 7 7 C 1.53780 * 113.61733 * 140.83805 * 5 4 3 8 8 C 1.53953 * 87.02140 * 139.95040 * 7 5 4 9 9 H 1.08993 * 113.74668 * 220.05938 * 8 7 5 10 10 N 1.46496 * 113.53863 * 89.18448 * 8 7 5 11 11 C 1.34780 * 119.99700 * 107.50173 * 10 8 7 12 12 O 1.21281 * 119.99960 * 0.02562 * 11 10 8 13 13 C 1.50707 * 120.00091 * 180.02562 * 11 10 8 14 14 C 1.50693 * 109.47112 * 180.02562 * 13 11 10 15 15 C 1.34854 * 125.88810 * 274.69226 * 14 13 11 16 16 C 1.40895 * 107.41712 * 179.88717 * 15 14 13 17 17 C 1.34849 * 107.41650 * 0.37773 * 16 15 14 18 18 C 1.50700 * 125.89134 * 179.80761 * 17 16 15 19 19 O 1.42898 * 109.47147 * 119.95964 * 18 17 16 20 20 Si 1.86294 * 109.47088 * 359.95530 * 18 17 16 21 21 N 1.36339 * 125.89395 * 94.99963 * 14 13 11 22 22 C 1.53783 * 113.61300 * 238.44560 * 5 4 3 23 23 C 1.38172 * 119.94461 * 179.97438 * 4 3 2 24 24 C 1.38241 * 120.05236 * 359.97438 * 23 4 3 25 25 C 1.38288 * 120.11556 * 359.97438 * 24 23 4 26 26 C 1.38119 * 120.05366 * 0.28328 * 25 24 23 27 27 H 1.08999 * 109.47378 * 60.00067 * 1 2 3 28 28 H 1.09009 * 109.46866 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47201 * 299.99532 * 1 2 3 30 30 H 1.09000 * 113.61254 * 254.52691 * 7 5 4 31 31 H 1.08998 * 113.60950 * 25.42973 * 7 5 4 32 32 H 0.96997 * 120.00377 * 287.51087 * 10 8 7 33 33 H 1.09000 * 109.47075 * 300.00367 * 13 11 10 34 34 H 1.08997 * 109.46546 * 60.00448 * 13 11 10 35 35 H 1.08003 * 126.29173 * 0.02562 * 15 14 13 36 36 H 1.07997 * 126.29186 * 180.12793 * 16 15 14 37 37 H 1.09000 * 109.47038 * 239.95896 * 18 17 16 38 38 H 0.96702 * 113.99858 * 299.99848 * 19 18 17 39 39 H 1.48503 * 110.00245 * 180.02562 * 20 18 17 40 40 H 1.48502 * 110.00171 * 301.31836 * 20 18 17 41 41 H 0.96994 * 125.63709 * 359.96261 * 21 14 13 42 42 H 1.08999 * 113.61544 * 334.56368 * 22 5 4 43 43 H 1.09003 * 113.61336 * 105.38439 * 22 5 4 44 44 H 1.07996 * 119.96843 * 180.02562 * 23 4 3 45 45 H 1.08006 * 119.93966 * 180.02562 * 24 23 4 46 46 H 1.08002 * 119.96980 * 179.97438 * 25 24 23 47 47 H 1.07998 * 120.02956 * 179.72220 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0222 0.0005 6 1 3.6551 -0.8730 -0.1680 7 6 5.5057 0.1026 -0.8888 8 6 6.2460 -0.6639 0.2224 9 1 7.2595 -0.3056 0.4025 10 7 6.1748 -2.1198 0.0762 11 6 7.2650 -2.8124 -0.3091 12 8 8.3049 -2.2304 -0.5342 13 6 7.1917 -4.3101 -0.4601 14 6 8.5343 -4.8372 -0.8965 15 6 8.9794 -4.9112 -2.1674 16 6 10.2769 -5.4590 -2.1285 17 6 10.5720 -5.7067 -0.8362 18 6 11.8582 -6.2998 -0.3217 19 8 12.4840 -5.3773 0.5724 20 14 12.9982 -6.6476 -1.7535 21 7 9.5061 -5.3270 -0.0753 22 6 5.2074 -0.0917 1.2016 23 6 4.0559 2.5172 0.0000 24 6 3.3018 3.6758 -0.0016 25 6 1.9208 3.6047 -0.0032 26 6 1.2914 2.3753 0.0027 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0278 0.0005 29 1 -0.3634 0.5138 0.8901 30 1 5.4161 -0.4560 -1.8205 31 1 5.8716 1.1186 -1.0367 32 1 5.3432 -2.5853 0.2565 33 1 6.9186 -4.7587 0.4951 34 1 6.4408 -4.5634 -1.2084 35 1 8.4411 -4.6047 -3.0521 36 1 10.9160 -5.6496 -2.9780 37 1 11.6442 -7.2291 0.2063 38 1 12.7035 -4.5262 0.1692 39 1 14.2702 -7.2334 -1.2594 40 1 12.3462 -7.5811 -2.7067 41 1 9.4489 -5.3941 0.8906 42 1 5.4916 0.8711 1.6262 43 1 4.8764 -0.8058 1.9557 44 1 5.1343 2.5752 0.0000 45 1 3.7922 4.6381 -0.0024 46 1 1.3339 4.5114 -0.0040 47 1 0.2128 2.3203 0.0060 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_14644196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:26 Heat of formation + Delta-G solvation = -4.859964 kcal Electronic energy + Delta-G solvation = -28776.678983 eV Core-core repulsion = 24699.951665 eV Total energy + Delta-G solvation = -4076.727318 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.26285 -41.69368 -40.67248 -39.25672 -38.05645 -37.60382 -34.53333 -33.08361 -31.83964 -31.73312 -31.07959 -29.34367 -28.26701 -26.71666 -26.23728 -25.04200 -23.23577 -22.67925 -22.00130 -21.24883 -20.93430 -20.10280 -19.14375 -18.83112 -18.16783 -17.36949 -17.17273 -16.77359 -16.72242 -16.56822 -16.28155 -16.13320 -15.42697 -15.31413 -15.28493 -15.00494 -14.80175 -14.53042 -14.40082 -14.11013 -14.02594 -13.96234 -13.80750 -13.64392 -13.43187 -13.12201 -13.06874 -12.84889 -12.72071 -12.32877 -12.10072 -11.96493 -11.85839 -11.74496 -11.67521 -11.16347 -10.83294 -10.56798 -10.03597 -9.76268 -9.67401 -9.07462 -8.85443 -4.91390 0.34070 0.49367 1.18702 1.34331 1.66625 1.73453 1.96737 1.99159 2.29300 2.32520 2.54569 2.75745 3.46306 3.50959 3.64750 3.65867 3.70855 3.86444 3.88092 3.95867 3.98251 4.03490 4.07187 4.14045 4.17066 4.18871 4.38722 4.40603 4.43666 4.46580 4.52192 4.62918 4.64605 4.69075 4.72866 4.84928 4.86390 4.93231 5.01485 5.06869 5.17378 5.36045 5.39209 5.39682 5.48496 5.58831 5.66952 5.81415 6.09727 6.24233 6.40703 6.47978 6.58717 6.70698 7.26682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.129 3.871 4 C -0.103 4.103 5 C -0.063 4.063 6 H 0.102 0.898 7 C -0.144 4.144 8 C 0.121 3.879 9 H 0.104 0.896 10 N -0.715 5.715 11 C 0.514 3.486 12 O -0.520 6.520 13 C -0.072 4.072 14 C 0.036 3.964 15 C -0.173 4.173 16 C -0.188 4.188 17 C -0.011 4.011 18 C -0.049 4.049 19 O -0.547 6.547 20 Si 0.720 3.280 21 N -0.535 5.535 22 C -0.136 4.136 23 C -0.080 4.080 24 C -0.154 4.154 25 C -0.083 4.083 26 C -0.207 4.207 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.055 0.945 30 H 0.074 0.926 31 H 0.094 0.906 32 H 0.401 0.599 33 H 0.099 0.901 34 H 0.117 0.883 35 H 0.136 0.864 36 H 0.141 0.859 37 H 0.109 0.891 38 H 0.383 0.617 39 H -0.256 1.256 40 H -0.255 1.255 41 H 0.412 0.588 42 H 0.096 0.904 43 H 0.075 0.925 44 H 0.130 0.870 45 H 0.125 0.875 46 H 0.124 0.876 47 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.013 1.300 0.284 5.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.084 3.916 4 C -0.104 4.104 5 C -0.081 4.081 6 H 0.120 0.880 7 C -0.182 4.182 8 C 0.015 3.985 9 H 0.122 0.878 10 N -0.368 5.368 11 C 0.300 3.700 12 O -0.395 6.395 13 C -0.113 4.113 14 C -0.078 4.078 15 C -0.197 4.197 16 C -0.213 4.213 17 C -0.124 4.124 18 C -0.160 4.160 19 O -0.353 6.353 20 Si 0.620 3.380 21 N -0.130 5.130 22 C -0.174 4.174 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.102 4.102 26 C -0.226 4.226 27 H 0.074 0.926 28 H 0.119 0.881 29 H 0.074 0.926 30 H 0.093 0.907 31 H 0.112 0.888 32 H 0.236 0.764 33 H 0.117 0.883 34 H 0.135 0.865 35 H 0.154 0.846 36 H 0.159 0.841 37 H 0.127 0.873 38 H 0.231 0.769 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.249 0.751 42 H 0.115 0.885 43 H 0.094 0.906 44 H 0.148 0.852 45 H 0.143 0.857 46 H 0.142 0.858 47 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -3.790 0.391 0.248 3.819 hybrid contribution -1.577 -0.095 0.964 1.850 sum -5.367 0.296 1.212 5.510 Atomic orbital electron populations 1.23081 0.78215 1.04121 1.01435 1.86039 1.21414 1.26820 1.88648 1.18859 0.91814 0.84255 0.96641 1.19045 0.90109 0.95384 1.05848 1.21401 0.94003 0.95847 0.96872 0.88000 1.23602 0.95199 1.01403 0.98026 1.21860 1.00299 0.79877 0.96436 0.87780 1.45688 1.13714 1.07133 1.70219 1.20591 0.83492 0.89455 0.76498 1.90763 1.29550 1.70978 1.48195 1.20133 0.94716 0.92039 1.04404 1.19468 0.91555 1.06211 0.90521 1.20588 0.96609 1.06999 0.95553 1.20647 0.98078 1.07744 0.94814 1.20834 0.91351 1.08736 0.91496 1.24833 0.93403 0.94390 1.03356 1.86461 1.80426 1.28738 1.39650 0.93945 0.78272 0.87872 0.77934 1.41782 1.12792 1.49413 1.08985 1.23435 0.95405 1.02137 0.96446 1.20879 1.00051 0.91022 0.97837 1.21087 0.93936 0.98530 1.03656 1.20977 0.94790 0.97047 0.97345 1.21265 1.00117 0.92440 1.08759 0.92585 0.88095 0.92601 0.90736 0.88801 0.76407 0.88261 0.86472 0.84596 0.84146 0.87339 0.76943 1.18086 1.17923 0.75116 0.88508 0.90649 0.85233 0.85745 0.85760 0.85480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.34 9.42 -19.42 -0.18 -0.53 16 3 C 0.13 0.20 6.66 -39.22 -0.26 -0.06 16 4 C -0.10 -0.10 5.30 -104.47 -0.55 -0.65 16 5 C -0.06 0.03 3.75 -90.96 -0.34 -0.31 16 6 H 0.10 -0.03 7.31 -51.93 -0.38 -0.41 16 7 C -0.14 0.06 7.27 -25.83 -0.19 -0.13 16 8 C 0.12 -0.05 4.33 -67.03 -0.29 -0.34 16 9 H 0.10 0.14 7.46 -51.93 -0.39 -0.25 16 10 N -0.72 0.85 5.26 -52.93 -0.28 0.57 16 11 C 0.51 0.55 7.82 -10.98 -0.09 0.46 16 12 O -0.52 -2.91 15.63 5.56 0.09 -2.82 16 13 C -0.07 0.10 6.24 -29.03 -0.18 -0.08 16 14 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 15 C -0.17 -0.45 10.77 -39.78 -0.43 -0.88 16 16 C -0.19 -0.43 9.37 -39.78 -0.37 -0.80 16 17 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 18 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 19 O -0.55 -0.76 12.88 -35.23 -0.45 -1.22 16 20 Si 0.72 -0.14 30.58 -169.99 -5.20 -5.34 16 21 N -0.54 -0.83 6.07 -5.44 -0.03 -0.86 16 22 C -0.14 0.18 7.29 -25.92 -0.19 -0.01 16 23 C -0.08 -0.02 8.54 -39.60 -0.34 -0.36 16 24 C -0.15 -0.04 10.04 -39.56 -0.40 -0.44 16 25 C -0.08 -0.03 10.04 -39.61 -0.40 -0.43 16 26 C -0.21 -0.17 9.04 -39.43 -0.36 -0.52 16 27 H 0.06 -0.14 7.67 -51.93 -0.40 -0.53 16 28 H 0.10 -0.35 8.14 -51.92 -0.42 -0.78 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.09 -0.07 6.40 -51.93 -0.33 -0.41 16 32 H 0.40 -1.46 8.70 -40.82 -0.36 -1.82 16 33 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.12 -0.40 8.14 -51.93 -0.42 -0.82 16 35 H 0.14 0.20 8.06 -52.48 -0.42 -0.22 16 36 H 0.14 0.08 6.22 -52.49 -0.33 -0.25 16 37 H 0.11 0.09 7.96 -51.93 -0.41 -0.32 16 38 H 0.38 -0.65 8.70 45.56 0.40 -0.25 16 39 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 40 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 41 H 0.41 -0.01 8.96 -40.82 -0.37 -0.38 16 42 H 0.10 -0.14 7.64 -51.93 -0.40 -0.54 16 43 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 44 H 0.13 -0.18 6.73 -52.49 -0.35 -0.53 16 45 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 46 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 47 H 0.13 -0.12 6.30 -52.49 -0.33 -0.45 16 LS Contribution 388.17 15.07 5.85 5.85 Total: 0.00 -9.52 388.17 -11.10 -20.62 By element: Atomic # 1 Polarization: -5.16 SS G_CDS: -6.62 Total: -11.78 kcal Atomic # 6 Polarization: -0.22 SS G_CDS: -4.27 Total: -4.50 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.31 Total: -0.29 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -0.55 Total: -4.57 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.20 Total: -5.34 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -9.52 -11.10 -20.62 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_14644196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.762 kcal (2) G-P(sol) polarization free energy of solvation -9.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.243 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.622 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.860 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds