Wall clock time and date at job start Sun Mar 7 2021 05:08:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35898 * 117.00043 * 2 1 4 4 C 1.38707 * 120.05730 * 179.97438 * 3 2 1 5 5 C 1.50701 * 120.02848 * 0.02562 * 4 3 2 6 6 H 1.09002 * 112.84715 * 9.63531 * 5 4 3 7 7 C 1.53780 * 113.61733 * 140.83805 * 5 4 3 8 8 C 1.53953 * 87.02140 * 139.95040 * 7 5 4 9 9 H 1.08993 * 113.74668 * 220.05938 * 8 7 5 10 10 N 1.46496 * 113.53863 * 89.18448 * 8 7 5 11 11 C 1.34780 * 119.99700 * 107.50173 * 10 8 7 12 12 O 1.21281 * 119.99960 * 0.02562 * 11 10 8 13 13 C 1.50707 * 120.00091 * 180.02562 * 11 10 8 14 14 C 1.50693 * 109.47112 * 180.02562 * 13 11 10 15 15 C 1.34854 * 125.88810 * 274.69226 * 14 13 11 16 16 C 1.40895 * 107.41712 * 179.88717 * 15 14 13 17 17 C 1.34849 * 107.41650 * 0.37773 * 16 15 14 18 18 C 1.50700 * 125.89134 * 179.80761 * 17 16 15 19 19 O 1.42898 * 109.47147 * 119.95964 * 18 17 16 20 20 Si 1.86294 * 109.47088 * 359.95530 * 18 17 16 21 21 N 1.36339 * 125.89395 * 94.99963 * 14 13 11 22 22 C 1.53783 * 113.61300 * 238.44560 * 5 4 3 23 23 C 1.38172 * 119.94461 * 179.97438 * 4 3 2 24 24 C 1.38241 * 120.05236 * 359.97438 * 23 4 3 25 25 C 1.38288 * 120.11556 * 359.97438 * 24 23 4 26 26 C 1.38119 * 120.05366 * 0.28328 * 25 24 23 27 27 H 1.08999 * 109.47378 * 60.00067 * 1 2 3 28 28 H 1.09009 * 109.46866 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47201 * 299.99532 * 1 2 3 30 30 H 1.09000 * 113.61254 * 254.52691 * 7 5 4 31 31 H 1.08998 * 113.60950 * 25.42973 * 7 5 4 32 32 H 0.96997 * 120.00377 * 287.51087 * 10 8 7 33 33 H 1.09000 * 109.47075 * 300.00367 * 13 11 10 34 34 H 1.08997 * 109.46546 * 60.00448 * 13 11 10 35 35 H 1.08003 * 126.29173 * 0.02562 * 15 14 13 36 36 H 1.07997 * 126.29186 * 180.12793 * 16 15 14 37 37 H 1.09000 * 109.47038 * 239.95896 * 18 17 16 38 38 H 0.96702 * 113.99858 * 299.99848 * 19 18 17 39 39 H 1.48503 * 110.00245 * 180.02562 * 20 18 17 40 40 H 1.48502 * 110.00171 * 301.31836 * 20 18 17 41 41 H 0.96994 * 125.63709 * 359.96261 * 21 14 13 42 42 H 1.08999 * 113.61544 * 334.56368 * 22 5 4 43 43 H 1.09003 * 113.61336 * 105.38439 * 22 5 4 44 44 H 1.07996 * 119.96843 * 180.02562 * 23 4 3 45 45 H 1.08006 * 119.93966 * 180.02562 * 24 23 4 46 46 H 1.08002 * 119.96980 * 179.97438 * 25 24 23 47 47 H 1.07998 * 120.02956 * 179.72220 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0222 0.0005 6 1 3.6551 -0.8730 -0.1680 7 6 5.5057 0.1026 -0.8888 8 6 6.2460 -0.6639 0.2224 9 1 7.2595 -0.3056 0.4025 10 7 6.1748 -2.1198 0.0762 11 6 7.2650 -2.8124 -0.3091 12 8 8.3049 -2.2304 -0.5342 13 6 7.1917 -4.3101 -0.4601 14 6 8.5343 -4.8372 -0.8965 15 6 8.9794 -4.9112 -2.1674 16 6 10.2769 -5.4590 -2.1285 17 6 10.5720 -5.7067 -0.8362 18 6 11.8582 -6.2998 -0.3217 19 8 12.4840 -5.3773 0.5724 20 14 12.9982 -6.6476 -1.7535 21 7 9.5061 -5.3270 -0.0753 22 6 5.2074 -0.0917 1.2016 23 6 4.0559 2.5172 0.0000 24 6 3.3018 3.6758 -0.0016 25 6 1.9208 3.6047 -0.0032 26 6 1.2914 2.3753 0.0027 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0278 0.0005 29 1 -0.3634 0.5138 0.8901 30 1 5.4161 -0.4560 -1.8205 31 1 5.8716 1.1186 -1.0367 32 1 5.3432 -2.5853 0.2565 33 1 6.9186 -4.7587 0.4951 34 1 6.4408 -4.5634 -1.2084 35 1 8.4411 -4.6047 -3.0521 36 1 10.9160 -5.6496 -2.9780 37 1 11.6442 -7.2291 0.2063 38 1 12.7035 -4.5262 0.1692 39 1 14.2702 -7.2334 -1.2594 40 1 12.3462 -7.5811 -2.7067 41 1 9.4489 -5.3941 0.8906 42 1 5.4916 0.8711 1.6262 43 1 4.8764 -0.8058 1.9557 44 1 5.1343 2.5752 0.0000 45 1 3.7922 4.6381 -0.0024 46 1 1.3339 4.5114 -0.0040 47 1 0.2128 2.3203 0.0060 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_14644196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:25 Heat of formation + Delta-G solvation = -4.423783 kcal Electronic energy + Delta-G solvation = -28776.660069 eV Core-core repulsion = 24699.951665 eV Total energy + Delta-G solvation = -4076.708404 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.33690 -41.67960 -40.69777 -39.29290 -38.03411 -37.68239 -34.59017 -33.08960 -31.92958 -31.73299 -31.04716 -29.37382 -28.13973 -26.67181 -26.23450 -25.09236 -23.20712 -22.66924 -22.04428 -21.34939 -21.00939 -20.08738 -19.11238 -18.89773 -18.18274 -17.34620 -17.20373 -16.76269 -16.65913 -16.58251 -16.31382 -16.19301 -15.38589 -15.34179 -15.28968 -15.03308 -14.82600 -14.60256 -14.37235 -14.12812 -14.10327 -13.99421 -13.89116 -13.61386 -13.39748 -13.11525 -12.98286 -12.76690 -12.70046 -12.28422 -12.07565 -12.01969 -11.98881 -11.72935 -11.63352 -11.14581 -10.96875 -10.64339 -10.05826 -9.79232 -9.75437 -9.07052 -8.95298 -4.92798 0.34703 0.48914 1.10533 1.30403 1.62125 1.68067 1.88646 1.92213 2.30030 2.38311 2.51338 2.76388 3.50255 3.50538 3.67787 3.68423 3.73437 3.81069 3.92764 4.01584 4.04251 4.11396 4.20142 4.21623 4.32854 4.36894 4.38996 4.46423 4.49251 4.49984 4.61686 4.66864 4.71839 4.74314 4.79385 4.79997 4.88131 4.97418 5.02939 5.10906 5.20897 5.26076 5.29420 5.41143 5.50660 5.60236 5.69117 5.85744 6.00236 6.14004 6.44354 6.53537 6.64737 6.68140 7.27114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.330 6.330 3 C 0.112 3.888 4 C -0.116 4.116 5 C -0.056 4.056 6 H 0.101 0.899 7 C -0.141 4.141 8 C 0.120 3.880 9 H 0.085 0.915 10 N -0.702 5.702 11 C 0.514 3.486 12 O -0.572 6.572 13 C -0.067 4.067 14 C 0.033 3.967 15 C -0.200 4.200 16 C -0.203 4.203 17 C -0.020 4.020 18 C -0.054 4.054 19 O -0.561 6.561 20 Si 0.800 3.200 21 N -0.537 5.537 22 C -0.125 4.125 23 C -0.087 4.087 24 C -0.164 4.164 25 C -0.094 4.094 26 C -0.218 4.218 27 H 0.060 0.940 28 H 0.116 0.884 29 H 0.061 0.939 30 H 0.065 0.935 31 H 0.096 0.904 32 H 0.416 0.584 33 H 0.127 0.873 34 H 0.142 0.858 35 H 0.140 0.860 36 H 0.152 0.848 37 H 0.107 0.893 38 H 0.395 0.605 39 H -0.293 1.293 40 H -0.284 1.284 41 H 0.418 0.582 42 H 0.099 0.901 43 H 0.082 0.918 44 H 0.142 0.858 45 H 0.139 0.861 46 H 0.140 0.860 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.090 1.364 0.729 6.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.244 6.244 3 C 0.067 3.933 4 C -0.117 4.117 5 C -0.074 4.074 6 H 0.119 0.881 7 C -0.179 4.179 8 C 0.014 3.986 9 H 0.103 0.897 10 N -0.354 5.354 11 C 0.301 3.699 12 O -0.450 6.450 13 C -0.107 4.107 14 C -0.081 4.081 15 C -0.225 4.225 16 C -0.227 4.227 17 C -0.134 4.134 18 C -0.163 4.163 19 O -0.368 6.368 20 Si 0.704 3.296 21 N -0.132 5.132 22 C -0.163 4.163 23 C -0.105 4.105 24 C -0.182 4.182 25 C -0.112 4.112 26 C -0.236 4.236 27 H 0.078 0.922 28 H 0.135 0.865 29 H 0.079 0.921 30 H 0.084 0.916 31 H 0.114 0.886 32 H 0.253 0.747 33 H 0.145 0.855 34 H 0.160 0.840 35 H 0.158 0.842 36 H 0.169 0.831 37 H 0.125 0.875 38 H 0.245 0.755 39 H -0.220 1.220 40 H -0.211 1.211 41 H 0.256 0.744 42 H 0.118 0.882 43 H 0.101 0.899 44 H 0.160 0.840 45 H 0.157 0.843 46 H 0.158 0.842 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -4.923 0.470 0.715 4.997 hybrid contribution -1.289 -0.099 0.831 1.537 sum -6.212 0.372 1.546 6.412 Atomic orbital electron populations 1.23279 0.76937 1.05351 1.01890 1.86011 1.22839 1.26790 1.88714 1.19092 0.92288 0.84700 0.97193 1.19270 0.90313 0.96062 1.06061 1.21328 0.93668 0.95358 0.97081 0.88113 1.23579 0.95344 1.01419 0.97601 1.21795 0.99496 0.80311 0.96978 0.89668 1.45589 1.13900 1.06873 1.69075 1.20991 0.83007 0.90379 0.75503 1.90745 1.31471 1.72097 1.50703 1.20241 0.93787 0.90102 1.06613 1.19894 0.92513 1.05344 0.90369 1.20850 0.97174 1.08030 0.96399 1.20908 0.98442 1.07945 0.95446 1.20990 0.91822 1.08991 0.91598 1.24977 0.93373 0.94225 1.03755 1.86426 1.80424 1.29620 1.40354 0.92907 0.74899 0.86202 0.75557 1.41879 1.12731 1.49206 1.09386 1.23370 0.94422 1.02345 0.96174 1.21094 1.00802 0.90951 0.97607 1.21359 0.94167 0.99234 1.03404 1.21255 0.95167 0.97598 0.97137 1.21495 1.00905 0.92472 1.08751 0.92185 0.86537 0.92071 0.91589 0.88580 0.74691 0.85478 0.84039 0.84190 0.83105 0.87515 0.75513 1.22020 1.21064 0.74412 0.88247 0.89908 0.84030 0.84345 0.84246 0.84284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.72 9.42 -92.40 -0.87 -1.59 16 3 C 0.11 0.37 6.66 22.51 0.15 0.52 16 4 C -0.12 -0.24 5.30 -19.77 -0.10 -0.35 16 5 C -0.06 0.06 3.75 -11.01 -0.04 0.02 16 6 H 0.10 -0.08 7.31 -2.39 -0.02 -0.10 16 7 C -0.14 0.06 7.27 31.18 0.23 0.29 16 8 C 0.12 -0.06 4.33 45.58 0.20 0.14 16 9 H 0.09 0.33 7.46 -2.39 -0.02 0.32 16 10 N -0.70 1.92 5.26 -439.76 -2.31 -0.39 16 11 C 0.51 1.07 7.82 87.66 0.69 1.75 16 12 O -0.57 -6.98 15.63 -3.03 -0.05 -7.03 16 13 C -0.07 0.25 6.24 29.10 0.18 0.43 16 14 C 0.03 0.11 5.66 41.08 0.23 0.34 16 15 C -0.20 -1.15 10.77 22.14 0.24 -0.92 16 16 C -0.20 -1.05 9.37 22.14 0.21 -0.84 16 17 C -0.02 -0.09 6.50 41.08 0.27 0.18 16 18 C -0.05 -0.11 3.08 71.24 0.22 0.11 16 19 O -0.56 -1.69 12.88 -148.98 -1.92 -3.61 16 20 Si 0.80 0.10 30.58 68.60 2.10 2.20 16 21 N -0.54 -1.74 6.07 -171.12 -1.04 -2.78 16 22 C -0.13 0.36 7.29 31.12 0.23 0.59 16 23 C -0.09 -0.05 8.54 22.25 0.19 0.14 16 24 C -0.16 -0.07 10.04 22.28 0.22 0.15 16 25 C -0.09 -0.06 10.04 22.25 0.22 0.16 16 26 C -0.22 -0.35 9.04 22.37 0.20 -0.15 16 27 H 0.06 -0.31 7.67 -2.39 -0.02 -0.32 16 28 H 0.12 -0.90 8.14 -2.38 -0.02 -0.92 16 29 H 0.06 -0.33 7.66 -2.38 -0.02 -0.34 16 30 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.10 -0.10 6.40 -2.39 -0.02 -0.11 16 32 H 0.42 -3.52 8.70 -92.71 -0.81 -4.33 16 33 H 0.13 -1.18 8.14 -2.39 -0.02 -1.20 16 34 H 0.14 -1.21 8.14 -2.39 -0.02 -1.23 16 35 H 0.14 0.53 8.06 -2.91 -0.02 0.50 16 36 H 0.15 0.25 6.22 -2.91 -0.02 0.23 16 37 H 0.11 0.23 7.96 -2.39 -0.02 0.21 16 38 H 0.39 -1.26 8.70 -74.06 -0.64 -1.90 16 39 H -0.29 -1.82 7.11 99.48 0.71 -1.11 16 40 H -0.28 -1.41 7.11 99.48 0.71 -0.70 16 41 H 0.42 -0.03 8.96 -92.71 -0.83 -0.86 16 42 H 0.10 -0.31 7.64 -2.39 -0.02 -0.33 16 43 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 44 H 0.14 -0.39 6.73 -2.91 -0.02 -0.41 16 45 H 0.14 -0.44 8.06 -2.91 -0.02 -0.47 16 46 H 0.14 -0.46 8.06 -2.91 -0.02 -0.49 16 47 H 0.14 -0.27 6.30 -2.91 -0.02 -0.29 16 Total: 0.00 -23.07 388.17 -0.67 -23.74 By element: Atomic # 1 Polarization: -12.92 SS G_CDS: -1.22 Total: -14.14 kcal Atomic # 6 Polarization: -1.04 SS G_CDS: 4.64 Total: 3.60 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -3.35 Total: -3.17 kcal Atomic # 8 Polarization: -9.39 SS G_CDS: -2.84 Total: -12.23 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: 2.10 Total: 2.20 kcal Total: -23.07 -0.67 -23.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_14644196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.318 kcal (2) G-P(sol) polarization free energy of solvation -23.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.742 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.424 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds