Wall clock time and date at job start Sun Mar 7 2021 05:08:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35895 * 117.00558 * 2 1 4 4 C 1.38704 * 120.06070 * 180.02562 * 3 2 1 5 5 C 1.50700 * 120.02471 * 359.97438 * 4 3 2 6 6 H 1.09000 * 112.85151 * 11.20587 * 5 4 3 7 7 C 1.53784 * 113.68787 * 142.46514 * 5 4 3 8 8 C 1.53778 * 87.08008 * 139.99340 * 7 5 4 9 9 H 1.09006 * 113.69483 * 220.00756 * 8 7 5 10 10 N 1.46501 * 113.61732 * 89.11874 * 8 7 5 11 11 C 1.34769 * 120.00299 * 107.50338 * 10 8 7 12 12 O 1.21277 * 120.00253 * 4.97054 * 11 10 8 13 13 C 1.50704 * 119.99980 * 184.97481 * 11 10 8 14 14 C 1.53045 * 109.32995 * 143.90932 * 13 11 10 15 15 C 1.53537 * 108.56112 * 169.82938 * 14 13 11 16 16 N 1.47030 * 107.66174 * 299.05500 * 15 14 13 17 17 C 1.38919 * 118.88277 * 43.65957 * 16 15 14 18 18 C 1.31112 * 121.85045 * 346.69228 * 17 16 15 19 19 C 1.50703 * 118.54852 * 180.37701 * 18 17 16 20 20 O 1.42894 * 109.47430 * 256.90171 * 19 18 17 21 21 Si 1.86300 * 109.47058 * 16.90423 * 19 18 17 22 22 C 1.53776 * 87.08272 * 334.56565 * 8 7 5 23 23 C 1.38159 * 119.94720 * 180.27479 * 4 3 2 24 24 C 1.38251 * 120.05542 * 359.49320 * 23 4 3 25 25 C 1.38288 * 120.10976 * 0.50692 * 24 23 4 26 26 C 1.38122 * 120.05334 * 359.74601 * 25 24 23 27 27 H 1.08996 * 109.47574 * 180.02562 * 1 2 3 28 28 H 1.09008 * 109.46391 * 299.99883 * 1 2 3 29 29 H 1.08992 * 109.47190 * 59.99407 * 1 2 3 30 30 H 1.08996 * 113.61776 * 25.44511 * 7 5 4 31 31 H 1.09006 * 113.61705 * 254.54022 * 7 5 4 32 32 H 0.97008 * 119.99725 * 287.50575 * 10 8 7 33 33 H 1.09004 * 109.32877 * 24.26105 * 13 11 10 34 34 H 1.09004 * 109.62040 * 50.11340 * 14 13 11 35 35 H 1.08996 * 109.62223 * 289.55928 * 14 13 11 36 36 H 1.09005 * 109.82021 * 179.51120 * 15 14 13 37 37 H 1.09005 * 109.87164 * 58.62373 * 15 14 13 38 38 H 0.96998 * 120.55752 * 223.64495 * 16 15 14 39 39 H 1.07999 * 119.07653 * 166.40426 * 17 16 15 40 40 H 1.09003 * 109.47054 * 136.89721 * 19 18 17 41 41 H 0.96702 * 114.00450 * 294.76756 * 20 19 18 42 42 H 1.48502 * 110.00016 * 59.99568 * 21 19 18 43 43 H 1.48492 * 110.00068 * 181.31613 * 21 19 18 44 44 H 1.09008 * 113.61555 * 139.97552 * 22 8 7 45 45 H 1.09003 * 113.61841 * 270.88602 * 22 8 7 46 46 H 1.07996 * 119.97439 * 179.74412 * 23 4 3 47 47 H 1.07998 * 119.94536 * 180.25773 * 24 23 4 48 48 H 1.07997 * 119.97644 * 179.76948 * 25 24 23 49 49 H 1.08004 * 120.02932 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4312 1.2847 -0.0005 5 6 4.2537 0.0220 -0.0005 6 1 3.6591 -0.8705 -0.1953 7 6 5.5263 0.1136 -0.8590 8 6 6.2399 -0.6697 0.2555 9 1 7.2497 -0.3153 0.4625 10 7 6.1705 -2.1234 0.0880 11 6 7.2680 -2.8122 -0.2825 12 8 8.3336 -2.2432 -0.3897 13 6 7.1712 -4.2896 -0.5637 14 6 8.1082 -4.6479 -1.7194 15 6 8.1920 -6.1773 -1.8247 16 7 8.7404 -6.6823 -0.5574 17 6 8.2674 -6.1530 0.6367 18 6 7.5492 -5.0567 0.6711 19 6 7.0819 -4.5435 2.0088 20 8 5.6999 -4.8614 2.1846 21 14 8.0801 -5.3426 3.3637 22 6 5.1808 -0.1094 1.2194 23 6 4.0561 2.5169 0.0052 24 6 3.3021 3.6757 0.0009 25 6 1.9210 3.6047 0.0014 26 6 1.2915 2.3753 0.0009 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3632 0.5139 0.8901 29 1 -0.3633 0.5139 -0.8899 30 1 5.8968 1.1311 -0.9835 31 1 5.4580 -0.4312 -1.8007 32 1 5.3345 -2.5903 0.2437 33 1 6.1464 -4.5379 -0.8400 34 1 9.1003 -4.2395 -1.5264 35 1 7.7154 -4.2378 -2.6498 36 1 8.8489 -6.4557 -2.6488 37 1 7.1974 -6.5925 -1.9885 38 1 9.4209 -7.3736 -0.5552 39 1 8.4938 -6.6613 1.5623 40 1 7.2141 -3.4623 2.0496 41 1 5.1109 -4.4138 1.5618 42 1 9.5194 -5.0196 3.1922 43 1 7.6078 -4.8690 4.6894 44 1 4.8333 -0.8342 1.9557 45 1 5.4567 0.8472 1.6631 46 1 5.1345 2.5749 0.0090 47 1 3.7924 4.6379 0.0012 48 1 1.3341 4.5113 0.0018 49 1 0.2129 2.3203 0.0009 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_15608500.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:34 Heat of formation + Delta-G solvation = -30.483456 kcal Electronic energy + Delta-G solvation = -30920.957456 eV Core-core repulsion = 26815.807542 eV Total energy + Delta-G solvation = -4105.149914 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.177 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.86909 -41.21599 -40.00188 -38.81510 -38.01054 -37.44841 -34.51800 -33.39174 -32.77602 -31.75419 -31.07038 -28.29030 -27.44746 -26.71356 -26.35319 -25.50268 -23.31213 -23.15611 -22.62436 -21.86091 -20.12854 -19.25955 -19.15460 -18.81815 -18.09829 -17.93721 -17.34247 -16.86544 -16.71639 -16.68561 -16.37965 -15.87405 -15.47400 -15.40628 -15.27210 -14.98750 -14.78720 -14.69684 -14.48856 -14.36621 -14.03005 -13.93985 -13.88728 -13.49001 -13.21433 -13.12945 -13.06354 -12.84243 -12.60199 -12.33813 -12.30455 -12.08710 -11.86805 -11.74657 -11.66514 -11.43457 -11.15481 -11.13731 -10.86145 -10.63328 -10.01688 -9.75586 -9.06420 -8.48916 -4.83424 0.34877 0.50211 1.28567 1.51087 1.72093 1.76449 2.10489 2.19493 2.30936 2.55039 2.76544 3.46309 3.54875 3.65432 3.67917 3.79803 3.82785 3.88046 3.97539 3.99905 4.06046 4.10288 4.14540 4.18895 4.20044 4.29111 4.34753 4.41526 4.43824 4.45443 4.51345 4.53977 4.64952 4.66979 4.69484 4.72331 4.73904 4.87898 4.94000 5.00272 5.07492 5.15145 5.19178 5.25065 5.40061 5.42437 5.49725 5.59618 5.67869 5.82284 6.28667 6.42031 6.47668 6.64562 6.79536 7.28857 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.062 4.062 6 H 0.102 0.898 7 C -0.144 4.144 8 C 0.118 3.882 9 H 0.104 0.896 10 N -0.715 5.715 11 C 0.527 3.473 12 O -0.532 6.532 13 C -0.039 4.039 14 C -0.126 4.126 15 C 0.123 3.877 16 N -0.749 5.749 17 C 0.168 3.832 18 C -0.280 4.280 19 C -0.064 4.064 20 O -0.538 6.538 21 Si 0.734 3.266 22 C -0.136 4.136 23 C -0.080 4.080 24 C -0.154 4.154 25 C -0.084 4.084 26 C -0.207 4.207 27 H 0.101 0.899 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.094 0.906 31 H 0.073 0.927 32 H 0.399 0.601 33 H 0.087 0.913 34 H 0.085 0.915 35 H 0.077 0.923 36 H 0.083 0.917 37 H 0.063 0.937 38 H 0.404 0.596 39 H 0.136 0.864 40 H 0.063 0.937 41 H 0.354 0.646 42 H -0.253 1.253 43 H -0.259 1.259 44 H 0.076 0.924 45 H 0.096 0.904 46 H 0.129 0.871 47 H 0.124 0.876 48 H 0.124 0.876 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.384 -2.591 -1.885 4.661 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.085 3.915 4 C -0.103 4.103 5 C -0.080 4.080 6 H 0.120 0.880 7 C -0.182 4.182 8 C 0.012 3.988 9 H 0.122 0.878 10 N -0.367 5.367 11 C 0.314 3.686 12 O -0.407 6.407 13 C -0.061 4.061 14 C -0.165 4.165 15 C -0.002 4.002 16 N -0.379 5.379 17 C 0.046 3.954 18 C -0.291 4.291 19 C -0.173 4.173 20 O -0.341 6.341 21 Si 0.634 3.366 22 C -0.174 4.174 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.102 4.102 26 C -0.226 4.226 27 H 0.119 0.881 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.112 0.888 31 H 0.092 0.908 32 H 0.233 0.767 33 H 0.105 0.895 34 H 0.104 0.896 35 H 0.096 0.904 36 H 0.102 0.898 37 H 0.081 0.919 38 H 0.239 0.761 39 H 0.153 0.847 40 H 0.081 0.919 41 H 0.200 0.800 42 H -0.178 1.178 43 H -0.184 1.184 44 H 0.094 0.906 45 H 0.115 0.885 46 H 0.147 0.853 47 H 0.142 0.858 48 H 0.142 0.858 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.816 -2.564 -0.949 3.282 hybrid contribution -1.194 1.377 -0.878 2.023 sum -3.010 -1.187 -1.827 3.716 Atomic orbital electron populations 1.23082 0.78198 1.04151 1.01415 1.86042 1.21424 1.26777 1.88616 1.18858 0.91800 0.84284 0.96585 1.19028 0.90120 0.95348 1.05848 1.21390 0.93944 0.95855 0.96844 0.87974 1.23576 0.95284 1.01268 0.98098 1.21845 1.00342 0.80064 0.96516 0.87802 1.45816 1.12987 1.07282 1.70644 1.20628 0.83544 0.89013 0.75450 1.90702 1.28006 1.70948 1.51085 1.19694 1.01061 0.90340 0.94994 1.21804 1.01213 0.96300 0.97134 1.21592 0.99296 0.93260 0.86059 1.44581 1.45555 1.44345 1.03386 1.20280 0.93548 0.92407 0.89148 1.20386 1.13862 0.99862 0.94979 1.25243 0.87575 1.02069 1.02435 1.86803 1.15541 1.72218 1.59572 0.93419 0.76541 0.91132 0.75526 1.23436 0.95382 1.02175 0.96448 1.20877 1.00029 0.91043 0.97874 1.21083 0.93946 0.98504 1.03704 1.20977 0.94775 0.97056 0.97357 1.21268 1.00124 0.92425 1.08748 0.88057 0.92591 0.92615 0.88796 0.90824 0.76656 0.89518 0.89601 0.90428 0.89840 0.91880 0.76128 0.84689 0.91922 0.80008 1.17784 1.18412 0.90575 0.88536 0.85283 0.85771 0.85759 0.85455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.45 9.43 -19.41 -0.18 -0.64 16 3 C 0.13 0.25 6.66 -39.22 -0.26 -0.01 16 4 C -0.10 -0.14 5.30 -104.48 -0.55 -0.70 16 5 C -0.06 0.00 3.74 -90.96 -0.34 -0.34 16 6 H 0.10 0.02 7.32 -51.93 -0.38 -0.36 16 7 C -0.14 -0.01 7.26 -25.92 -0.19 -0.19 16 8 C 0.12 0.06 4.35 -67.12 -0.29 -0.24 16 9 H 0.10 0.24 7.42 -51.93 -0.39 -0.14 16 10 N -0.72 0.02 5.02 -53.02 -0.27 -0.25 16 11 C 0.53 1.28 5.27 -10.99 -0.06 1.22 16 12 O -0.53 -3.52 15.67 5.56 0.09 -3.43 16 13 C -0.04 -0.02 2.68 -93.14 -0.25 -0.27 16 14 C -0.13 -0.02 5.31 -26.43 -0.14 -0.16 16 15 C 0.12 -0.22 7.16 -3.47 -0.02 -0.24 16 16 N -0.75 1.06 5.83 -60.68 -0.35 0.70 16 17 C 0.17 -0.03 9.59 -16.08 -0.15 -0.18 16 18 C -0.28 -0.25 5.00 -101.34 -0.51 -0.75 16 19 C -0.06 -0.09 2.48 36.01 0.09 0.00 16 20 O -0.54 -0.47 12.63 -35.23 -0.45 -0.92 16 21 Si 0.73 0.75 30.07 -169.99 -5.11 -4.36 16 22 C -0.14 0.06 7.29 -25.92 -0.19 -0.13 16 23 C -0.08 -0.06 8.60 -39.61 -0.34 -0.40 16 24 C -0.15 -0.10 10.04 -39.56 -0.40 -0.50 16 25 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 26 C -0.21 -0.23 9.04 -39.43 -0.36 -0.59 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 28 H 0.06 -0.12 7.66 -51.92 -0.40 -0.52 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 30 H 0.09 -0.04 6.34 -51.93 -0.33 -0.36 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.40 -0.93 8.17 -40.82 -0.33 -1.26 16 33 H 0.09 -0.13 8.12 -51.93 -0.42 -0.55 16 34 H 0.09 0.24 7.51 -51.93 -0.39 -0.15 16 35 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 36 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 37 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 38 H 0.40 -1.36 8.96 -40.82 -0.37 -1.73 16 39 H 0.14 -0.28 4.72 -52.49 -0.25 -0.53 16 40 H 0.06 0.16 6.46 -51.93 -0.34 -0.17 16 41 H 0.35 -0.74 8.59 45.56 0.39 -0.35 16 42 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 43 H -0.26 -1.05 7.11 56.52 0.40 -0.64 16 44 H 0.08 -0.04 8.14 -51.92 -0.42 -0.46 16 45 H 0.10 -0.06 7.71 -51.93 -0.40 -0.46 16 46 H 0.13 -0.11 6.68 -52.49 -0.35 -0.46 16 47 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 48 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 49 H 0.13 -0.08 6.30 -52.48 -0.33 -0.41 16 LS Contribution 387.08 15.07 5.83 5.83 Total: 0.00 -8.38 387.08 -11.06 -19.45 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -7.25 Total: -13.40 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -3.37 Total: -2.99 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.62 Total: 0.45 kcal Atomic # 8 Polarization: -4.44 SS G_CDS: -0.54 Total: -4.98 kcal Atomic # 14 Polarization: 0.75 SS G_CDS: -5.11 Total: -4.36 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -8.38 -11.06 -19.45 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_15608500.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.037 kcal (2) G-P(sol) polarization free energy of solvation -8.384 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.420 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds