Wall clock time and date at job start Sun Mar 7 2021 05:08:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35898 * 117.00022 * 2 1 4 4 C 1.38711 * 120.05518 * 179.97438 * 3 2 1 5 5 C 1.50706 * 120.02988 * 0.02562 * 4 3 2 6 6 H 1.08999 * 112.90538 * 348.46812 * 5 4 3 7 7 C 1.53772 * 113.61582 * 119.71946 * 5 4 3 8 8 C 1.53784 * 87.08417 * 139.98434 * 7 5 4 9 9 H 1.08998 * 113.61363 * 219.93714 * 8 7 5 10 10 N 1.46501 * 113.61539 * 89.11085 * 8 7 5 11 11 C 1.34773 * 119.99557 * 156.53125 * 10 8 7 12 12 O 1.21278 * 120.00306 * 0.02562 * 11 10 8 13 13 C 1.50703 * 119.99605 * 180.02562 * 11 10 8 14 14 O 1.42904 * 109.47031 * 180.02562 * 13 11 10 15 15 C 1.35895 * 117.00128 * 179.97438 * 14 13 11 16 16 C 1.38709 * 120.05826 * 180.02562 * 15 14 13 17 17 C 1.50705 * 120.02708 * 0.02562 * 16 15 14 18 18 O 1.42905 * 109.46508 * 284.97626 * 17 16 15 19 19 Si 1.86298 * 109.47262 * 164.97774 * 17 16 15 20 20 C 1.38164 * 119.94688 * 179.97438 * 16 15 14 21 21 C 1.38245 * 120.05645 * 0.02562 * 20 16 15 22 22 C 1.38290 * 120.10982 * 359.97438 * 21 20 16 23 23 C 1.38126 * 120.05768 * 0.02562 * 22 21 20 24 24 C 1.53782 * 87.16883 * 334.52379 * 8 7 5 25 25 C 1.38161 * 119.94506 * 179.72726 * 4 3 2 26 26 C 1.38242 * 120.05524 * 0.27686 * 25 4 3 27 27 C 1.38286 * 120.11059 * 359.97438 * 26 25 4 28 28 C 1.38112 * 120.05692 * 359.97438 * 27 26 25 29 29 H 1.08998 * 109.47250 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.46751 * 299.99785 * 1 2 3 31 31 H 1.08999 * 109.47096 * 59.99654 * 1 2 3 32 32 H 1.08996 * 113.61724 * 25.43044 * 7 5 4 33 33 H 1.09001 * 113.61533 * 254.53031 * 7 5 4 34 34 H 0.97002 * 120.00119 * 336.53512 * 10 8 7 35 35 H 1.09000 * 109.47423 * 60.00375 * 13 11 10 36 36 H 1.09002 * 109.47439 * 299.99751 * 13 11 10 37 37 H 1.08992 * 109.47373 * 44.97197 * 17 16 15 38 38 H 0.96696 * 114.00353 * 59.99848 * 18 17 16 39 39 H 1.48499 * 109.99689 * 299.99780 * 19 17 16 40 40 H 1.48501 * 109.99933 * 61.31379 * 19 17 16 41 41 H 1.07997 * 119.97418 * 180.02562 * 20 16 15 42 42 H 1.07995 * 119.94685 * 179.72562 * 21 20 16 43 43 H 1.07995 * 119.97112 * 180.02562 * 22 21 20 44 44 H 1.07998 * 120.03128 * 180.02562 * 23 22 21 45 45 H 1.09001 * 113.61750 * 140.02048 * 24 8 7 46 46 H 1.08998 * 113.61950 * 270.92727 * 24 8 7 47 47 H 1.08004 * 119.97625 * 180.26043 * 25 4 3 48 48 H 1.08004 * 119.94725 * 180.02562 * 26 25 4 49 49 H 1.08001 * 119.97201 * 180.02562 * 27 26 25 50 50 H 1.08000 * 120.03046 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2538 0.0221 0.0005 6 1 3.6610 -0.8704 0.2008 7 6 5.1758 -0.1125 -1.2228 8 6 6.2397 -0.6682 -0.2614 9 1 7.2481 -0.3132 -0.4739 10 7 6.1726 -2.1214 -0.0885 11 6 7.2646 -2.8037 0.3097 12 8 8.3026 -2.2146 0.5253 13 6 7.1958 -4.2986 0.4871 14 8 8.4698 -4.7870 0.9118 15 6 8.5795 -6.1255 1.1196 16 6 9.7873 -6.6678 1.5333 17 6 10.9797 -5.7728 1.7534 18 8 11.5176 -5.3769 0.4900 19 14 12.2783 -6.6950 2.7198 20 6 9.8961 -8.0288 1.7444 21 6 8.8025 -8.8503 1.5432 22 6 7.5972 -8.3122 1.1308 23 6 7.4833 -6.9521 0.9183 24 6 5.5322 0.1183 0.8547 25 6 4.0560 2.5170 -0.0052 26 6 3.3020 3.6757 -0.0056 27 6 1.9210 3.6047 -0.0009 28 6 1.2915 2.3753 0.0037 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 5.4486 0.8428 -1.6711 33 1 4.8262 -0.8403 -1.9550 34 1 5.3424 -2.5925 -0.2606 35 1 6.9250 -4.7649 -0.4602 36 1 6.4450 -4.5412 1.2392 37 1 10.6721 -4.8881 2.3106 38 1 10.8950 -4.8907 -0.0676 39 1 11.7312 -7.1123 4.0357 40 1 12.7292 -7.8863 1.9563 41 1 10.8361 -8.4514 2.0669 42 1 8.8907 -9.9145 1.7045 43 1 6.7442 -8.9559 0.9747 44 1 6.5417 -6.5323 0.5967 45 1 5.4701 -0.4233 1.7986 46 1 5.9023 1.1366 0.9735 47 1 5.1345 2.5751 -0.0090 48 1 3.7923 4.6380 -0.0105 49 1 1.3341 4.5113 -0.0017 50 1 0.2129 2.3204 0.0070 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_2989392.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:42 Heat of formation + Delta-G solvation = -53.051822 kcal Electronic energy + Delta-G solvation = -32493.521301 eV Core-core repulsion = 28033.221806 eV Total energy + Delta-G solvation = -4460.299495 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -41.90885 -41.54157 -40.74599 -39.48628 -38.44123 -38.01192 -37.28266 -34.70394 -32.76435 -32.08543 -31.28213 -31.11202 -29.48212 -28.28892 -26.79028 -26.55609 -26.13138 -23.91823 -23.16514 -22.65587 -22.58557 -21.82515 -20.22507 -19.48021 -19.16554 -18.36830 -18.09773 -17.59282 -17.49709 -17.24166 -16.78197 -16.75504 -16.71108 -16.59973 -15.77746 -15.65040 -15.53221 -15.43830 -15.21456 -15.04606 -14.98878 -14.65878 -14.36458 -14.12074 -13.99078 -13.66849 -13.58969 -13.46367 -13.17283 -13.11102 -12.88467 -12.76854 -12.62134 -12.38269 -12.27763 -12.13327 -12.00257 -11.82175 -11.73615 -11.22952 -11.09835 -10.94120 -10.81569 -10.19489 -10.03051 -9.80304 -9.29840 -9.10903 -4.69956 0.16289 0.30808 0.31705 0.46231 1.33926 1.42654 1.51524 1.77167 2.06862 2.25939 2.45704 2.62310 2.72337 3.35546 3.40688 3.58063 3.59344 3.63053 3.73185 3.75574 3.81956 3.83644 3.90965 3.96775 4.00262 4.09218 4.10420 4.14067 4.14923 4.20357 4.26050 4.36932 4.39536 4.43543 4.49070 4.57959 4.63237 4.63612 4.68135 4.75325 4.85847 4.90223 4.94045 5.03007 5.08483 5.16660 5.28086 5.35534 5.38998 5.42034 5.53643 5.58745 5.61077 5.78087 6.14549 6.31295 6.37268 6.77393 7.04363 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.104 4.104 5 C -0.063 4.063 6 H 0.102 0.898 7 C -0.134 4.134 8 C 0.122 3.878 9 H 0.107 0.893 10 N -0.709 5.709 11 C 0.519 3.481 12 O -0.509 6.509 13 C 0.040 3.960 14 O -0.288 6.288 15 C 0.138 3.862 16 C -0.137 4.137 17 C -0.076 4.076 18 O -0.535 6.535 19 Si 0.749 3.251 20 C -0.083 4.083 21 C -0.147 4.147 22 C -0.075 4.075 23 C -0.206 4.206 24 C -0.144 4.144 25 C -0.080 4.080 26 C -0.154 4.154 27 C -0.083 4.083 28 C -0.207 4.207 29 H 0.101 0.899 30 H 0.056 0.944 31 H 0.056 0.944 32 H 0.099 0.901 33 H 0.076 0.924 34 H 0.403 0.597 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.076 0.924 38 H 0.367 0.633 39 H -0.250 1.250 40 H -0.253 1.253 41 H 0.130 0.870 42 H 0.129 0.871 43 H 0.130 0.870 44 H 0.131 0.869 45 H 0.074 0.926 46 H 0.096 0.904 47 H 0.130 0.870 48 H 0.125 0.875 49 H 0.125 0.875 50 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.351 0.667 -0.728 6.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.084 3.916 4 C -0.105 4.105 5 C -0.081 4.081 6 H 0.120 0.880 7 C -0.172 4.172 8 C 0.016 3.984 9 H 0.125 0.875 10 N -0.363 5.363 11 C 0.304 3.696 12 O -0.382 6.382 13 C -0.039 4.039 14 O -0.201 6.201 15 C 0.092 3.908 16 C -0.138 4.138 17 C -0.185 4.185 18 O -0.341 6.341 19 Si 0.647 3.353 20 C -0.100 4.100 21 C -0.165 4.165 22 C -0.093 4.093 23 C -0.224 4.224 24 C -0.183 4.183 25 C -0.098 4.098 26 C -0.172 4.172 27 C -0.101 4.101 28 C -0.226 4.226 29 H 0.119 0.881 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.118 0.882 33 H 0.095 0.905 34 H 0.238 0.762 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.094 0.906 38 H 0.215 0.785 39 H -0.175 1.175 40 H -0.178 1.178 41 H 0.147 0.853 42 H 0.147 0.853 43 H 0.148 0.852 44 H 0.149 0.851 45 H 0.093 0.907 46 H 0.114 0.886 47 H 0.148 0.852 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -4.607 0.005 0.065 4.607 hybrid contribution -2.961 0.004 -0.837 3.077 sum -7.568 0.008 -0.772 7.607 Atomic orbital electron populations 1.23081 0.78192 1.04119 1.01463 1.86035 1.21435 1.26832 1.88653 1.18856 0.91801 0.84261 0.96637 1.19019 0.90099 0.95335 1.06010 1.21454 0.93979 0.95903 0.96811 0.87997 1.23430 0.95149 1.02285 0.96373 1.21870 1.00640 0.79069 0.96771 0.87510 1.45481 1.13298 1.07729 1.69767 1.19973 0.84019 0.88315 0.77336 1.90791 1.29476 1.70026 1.47919 1.22483 0.86333 0.92928 1.02115 1.86103 1.31930 1.19724 1.82313 1.18788 0.93788 0.82040 0.96170 1.19730 0.94198 0.94622 1.05258 1.25212 1.00414 1.01354 0.91526 1.86680 1.41887 1.77361 1.28156 0.92997 0.85426 0.79668 0.77195 1.20910 0.98956 0.92059 0.98118 1.21093 0.92890 1.00271 1.02294 1.21021 0.97761 0.94281 0.96258 1.21285 0.98257 0.94898 1.07999 1.23640 0.95151 1.01398 0.98111 1.20885 1.00071 0.91012 0.97815 1.21092 0.93935 0.98548 1.03602 1.20983 0.94800 0.97061 0.97261 1.21265 1.00134 0.92436 1.08731 0.88105 0.92583 0.92566 0.88247 0.90491 0.76226 0.88635 0.88712 0.90609 0.78484 1.17486 1.17794 0.85315 0.85260 0.85166 0.85072 0.90726 0.88551 0.85190 0.85709 0.85733 0.85464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.25 9.43 -19.42 -0.18 -0.43 16 3 C 0.13 0.17 6.66 -39.22 -0.26 -0.10 16 4 C -0.10 -0.06 5.30 -104.47 -0.55 -0.62 16 5 C -0.06 0.06 3.76 -90.82 -0.34 -0.28 16 6 H 0.10 -0.08 7.33 -51.93 -0.38 -0.46 16 7 C -0.13 0.25 7.29 -25.92 -0.19 0.06 16 8 C 0.12 -0.11 4.30 -67.12 -0.29 -0.40 16 9 H 0.11 0.07 7.50 -51.93 -0.39 -0.32 16 10 N -0.71 1.17 5.26 -53.02 -0.28 0.89 16 11 C 0.52 0.53 7.91 -10.99 -0.09 0.44 16 12 O -0.51 -2.89 16.12 -14.35 -0.23 -3.12 16 13 C 0.04 -0.04 5.22 36.01 0.19 0.14 16 14 O -0.29 -0.71 8.58 -39.32 -0.34 -1.05 16 15 C 0.14 0.34 6.62 -39.21 -0.26 0.08 16 16 C -0.14 -0.47 5.28 -104.47 -0.55 -1.03 16 17 C -0.08 -0.25 2.33 36.01 0.08 -0.16 16 18 O -0.54 -2.25 12.65 -35.23 -0.45 -2.69 16 19 Si 0.75 1.13 30.40 -169.99 -5.17 -4.04 16 20 C -0.08 -0.24 8.66 -39.61 -0.34 -0.58 16 21 C -0.15 -0.20 10.04 -39.56 -0.40 -0.59 16 22 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 23 C -0.21 -0.10 9.04 -39.43 -0.36 -0.46 16 24 C -0.14 0.12 7.27 -25.77 -0.19 -0.06 16 25 C -0.08 0.00 8.61 -39.61 -0.34 -0.34 16 26 C -0.15 -0.01 10.04 -39.56 -0.40 -0.40 16 27 C -0.08 -0.02 10.04 -39.61 -0.40 -0.41 16 28 C -0.21 -0.12 9.04 -39.44 -0.36 -0.47 16 29 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 30 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 31 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 32 H 0.10 -0.20 7.72 -51.93 -0.40 -0.60 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 34 H 0.40 -1.76 8.70 -40.82 -0.36 -2.12 16 35 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 36 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 37 H 0.08 0.25 7.83 -51.93 -0.41 -0.16 16 38 H 0.37 1.08 8.61 45.56 0.39 1.47 16 39 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 40 H -0.25 -0.87 6.81 56.52 0.38 -0.48 16 41 H 0.13 0.30 4.94 -52.49 -0.26 0.04 16 42 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 43 H 0.13 -0.26 8.06 -52.49 -0.42 -0.69 16 44 H 0.13 -0.31 6.30 -52.49 -0.33 -0.64 16 45 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 46 H 0.10 -0.12 6.32 -51.93 -0.33 -0.45 16 47 H 0.13 -0.23 6.66 -52.48 -0.35 -0.58 16 48 H 0.12 -0.20 8.06 -52.48 -0.42 -0.62 16 49 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 50 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 LS Contribution 409.13 15.07 6.17 6.17 Total: 0.00 -8.94 409.13 -11.83 -20.77 By element: Atomic # 1 Polarization: -4.92 SS G_CDS: -6.90 Total: -11.83 kcal Atomic # 6 Polarization: -0.22 SS G_CDS: -4.44 Total: -4.66 kcal Atomic # 7 Polarization: 1.17 SS G_CDS: -0.28 Total: 0.89 kcal Atomic # 8 Polarization: -6.10 SS G_CDS: -1.20 Total: -7.30 kcal Atomic # 14 Polarization: 1.13 SS G_CDS: -5.17 Total: -4.04 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -8.94 -11.83 -20.77 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_2989392.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.286 kcal (2) G-P(sol) polarization free energy of solvation -8.940 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.826 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.766 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.052 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds