Wall clock time and date at job start Sun Mar 7 2021 05:08:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35900 * 117.00370 * 2 1 4 4 C 1.38708 * 120.05751 * 180.02562 * 3 2 1 5 5 C 1.50697 * 120.02761 * 0.02562 * 4 3 2 6 6 H 1.08993 * 112.85194 * 11.18964 * 5 4 3 7 7 C 1.53784 * 113.61392 * 142.50291 * 5 4 3 8 8 C 1.53780 * 87.07907 * 139.97698 * 7 5 4 9 9 H 1.09007 * 113.61766 * 220.01500 * 8 7 5 10 10 N 1.46498 * 113.61324 * 89.11533 * 8 7 5 11 11 C 1.34774 * 120.00013 * 107.50411 * 10 8 7 12 12 O 1.21284 * 120.00329 * 359.97438 * 11 10 8 13 13 C 1.50706 * 120.00371 * 179.97438 * 11 10 8 14 14 O 1.42902 * 109.47476 * 179.97438 * 13 11 10 15 15 C 1.35896 * 116.99962 * 179.97438 * 14 13 11 16 16 C 1.38732 * 120.05447 * 359.73084 * 15 14 13 17 17 C 1.38149 * 119.94192 * 179.69870 * 16 15 14 18 18 C 1.38264 * 120.05336 * 0.59270 * 17 16 15 19 19 C 1.50705 * 119.94390 * 179.70144 * 18 17 16 20 20 O 1.42899 * 109.47226 * 119.97810 * 19 18 17 21 21 Si 1.86295 * 109.46965 * 359.97438 * 19 18 17 22 22 C 1.38269 * 120.11364 * 359.68096 * 18 17 16 23 23 C 1.38146 * 120.05388 * 0.02562 * 22 18 17 24 24 C 1.53776 * 87.08384 * 334.56650 * 8 7 5 25 25 C 1.38171 * 119.94045 * 180.02562 * 4 3 2 26 26 C 1.38240 * 120.06065 * 359.97438 * 25 4 3 27 27 C 1.38295 * 120.10794 * 0.02562 * 26 25 4 28 28 C 1.38119 * 120.05704 * 0.02562 * 27 26 25 29 29 H 1.08997 * 109.47450 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.47181 * 300.00095 * 1 2 3 31 31 H 1.08998 * 109.47333 * 59.99666 * 1 2 3 32 32 H 1.09000 * 113.61061 * 254.52656 * 7 5 4 33 33 H 1.08999 * 113.61370 * 25.42881 * 7 5 4 34 34 H 0.96997 * 120.00573 * 287.49937 * 10 8 7 35 35 H 1.08999 * 109.47154 * 300.00227 * 13 11 10 36 36 H 1.09002 * 109.46962 * 59.99494 * 13 11 10 37 37 H 1.07994 * 120.03270 * 359.97438 * 16 15 14 38 38 H 1.08000 * 119.97303 * 180.31941 * 17 16 15 39 39 H 1.09001 * 109.46941 * 239.97881 * 19 18 17 40 40 H 0.96705 * 114.00118 * 300.00388 * 20 19 18 41 41 H 1.48501 * 110.00151 * 58.68043 * 21 19 18 42 42 H 1.48502 * 109.99919 * 180.02562 * 21 19 18 43 43 H 1.07999 * 119.97226 * 180.02562 * 22 18 17 44 44 H 1.07997 * 120.02239 * 180.02562 * 23 22 18 45 45 H 1.09001 * 113.61550 * 270.88476 * 24 8 7 46 46 H 1.09002 * 113.61839 * 139.98363 * 24 8 7 47 47 H 1.08005 * 119.97011 * 180.02562 * 25 4 3 48 48 H 1.07995 * 119.94494 * 180.27435 * 26 25 4 49 49 H 1.07997 * 119.96986 * 179.97438 * 27 26 25 50 50 H 1.08001 * 120.02616 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2847 -0.0005 5 6 4.2537 0.0221 -0.0017 6 1 3.6590 -0.8703 -0.1969 7 6 5.5262 0.1167 -0.8599 8 6 6.2406 -0.6676 0.2534 9 1 7.2498 -0.3112 0.4601 10 7 6.1729 -2.1212 0.0834 11 6 7.2713 -2.8081 -0.2882 12 8 8.3157 -2.2229 -0.4823 13 6 7.2019 -4.3034 -0.4625 14 8 8.4835 -4.7971 -0.8571 15 6 8.5938 -6.1367 -1.0573 16 6 7.4925 -6.9598 -0.8721 17 6 7.6057 -8.3205 -1.0823 18 6 8.8182 -8.8637 -1.4649 19 6 8.9405 -10.3492 -1.6870 20 8 9.3396 -10.5979 -3.0364 21 14 7.2955 -11.1626 -1.3658 22 6 9.9187 -8.0461 -1.6446 23 6 9.8093 -6.6840 -1.4416 24 6 5.1808 -0.1102 1.2181 25 6 4.0560 2.5171 0.0000 26 6 3.3020 3.6758 0.0005 27 6 1.9209 3.6047 0.0011 28 6 1.2914 2.3753 0.0016 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 5.4586 -0.4266 -1.8024 33 1 5.8954 1.1349 -0.9826 34 1 5.3376 -2.5893 0.2383 35 1 6.9084 -4.7658 0.4799 36 1 6.4673 -4.5459 -1.2304 37 1 6.5465 -6.5368 -0.5683 38 1 6.7473 -8.9612 -0.9433 39 1 9.6871 -10.7581 -1.0061 40 1 8.7205 -10.2605 -3.6982 41 1 6.2620 -10.5911 -2.2661 42 1 7.4030 -12.6280 -1.5808 43 1 10.8647 -8.4727 -1.9439 44 1 10.6691 -6.0459 -1.5825 45 1 5.4555 0.8459 1.6635 46 1 4.8342 -0.8367 1.9532 47 1 5.1344 2.5752 -0.0008 48 1 3.7923 4.6380 -0.0035 49 1 1.3340 4.5113 0.0019 50 1 0.2128 2.3204 0.0024 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_2989410.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:46 Heat of formation + Delta-G solvation = -51.081353 kcal Electronic energy + Delta-G solvation = -31757.866902 eV Core-core repulsion = 27297.652852 eV Total energy + Delta-G solvation = -4460.214049 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -41.86716 -41.41985 -40.70660 -39.57819 -38.82283 -38.06141 -37.19060 -34.67846 -32.47420 -31.98563 -31.71443 -31.10446 -29.61841 -28.28355 -26.77128 -26.39286 -25.96747 -24.10640 -23.23608 -22.72629 -22.37476 -21.78567 -20.20171 -19.53875 -19.14830 -18.44367 -18.18110 -17.52115 -17.39994 -17.07634 -16.82013 -16.74872 -16.68638 -16.33198 -16.12458 -15.63195 -15.56592 -15.42647 -15.31783 -15.08546 -14.79117 -14.64801 -14.36829 -14.30590 -14.08595 -13.71812 -13.64920 -13.49868 -13.42707 -13.15084 -13.09961 -12.87038 -12.36917 -12.25293 -12.16100 -12.12664 -12.10066 -11.80027 -11.72292 -11.62936 -11.21553 -10.90509 -10.58639 -10.16959 -10.04167 -9.79340 -9.22349 -9.10015 -4.97776 0.28581 0.29873 0.31621 0.47031 1.28757 1.41038 1.46610 1.57928 1.95855 2.26828 2.52680 2.65358 2.73195 3.37834 3.39192 3.44504 3.60617 3.63259 3.68765 3.73206 3.83645 3.86180 3.87826 3.87993 3.93268 4.01441 4.11381 4.14936 4.15944 4.26386 4.37852 4.40459 4.43860 4.49979 4.53759 4.59611 4.64624 4.65715 4.69440 4.77654 4.87488 4.95053 4.95620 5.03950 5.10209 5.14859 5.24908 5.36502 5.41015 5.49900 5.54952 5.61273 5.68189 5.78909 6.22372 6.36967 6.38159 6.41786 7.08446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.130 3.870 4 C -0.104 4.104 5 C -0.063 4.063 6 H 0.102 0.898 7 C -0.145 4.145 8 C 0.121 3.879 9 H 0.107 0.893 10 N -0.710 5.710 11 C 0.519 3.481 12 O -0.510 6.510 13 C 0.040 3.960 14 O -0.288 6.288 15 C 0.135 3.865 16 C -0.206 4.206 17 C -0.075 4.075 18 C -0.156 4.156 19 C -0.070 4.070 20 O -0.530 6.530 21 Si 0.682 3.318 22 C -0.051 4.051 23 C -0.145 4.145 24 C -0.135 4.135 25 C -0.080 4.080 26 C -0.154 4.154 27 C -0.083 4.083 28 C -0.207 4.207 29 H 0.101 0.899 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.074 0.926 33 H 0.096 0.904 34 H 0.403 0.597 35 H 0.097 0.903 36 H 0.095 0.905 37 H 0.132 0.868 38 H 0.130 0.870 39 H 0.118 0.882 40 H 0.376 0.624 41 H -0.261 1.261 42 H -0.257 1.257 43 H 0.135 0.865 44 H 0.136 0.864 45 H 0.099 0.901 46 H 0.077 0.923 47 H 0.130 0.870 48 H 0.125 0.875 49 H 0.125 0.875 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.911 0.838 3.132 7.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.120 0.880 7 C -0.183 4.183 8 C 0.016 3.984 9 H 0.125 0.875 10 N -0.363 5.363 11 C 0.303 3.697 12 O -0.384 6.384 13 C -0.039 4.039 14 O -0.200 6.200 15 C 0.089 3.911 16 C -0.225 4.225 17 C -0.093 4.093 18 C -0.156 4.156 19 C -0.180 4.180 20 O -0.337 6.337 21 Si 0.583 3.417 22 C -0.069 4.069 23 C -0.164 4.164 24 C -0.173 4.173 25 C -0.098 4.098 26 C -0.172 4.172 27 C -0.101 4.101 28 C -0.226 4.226 29 H 0.119 0.881 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.093 0.907 33 H 0.114 0.886 34 H 0.238 0.762 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.150 0.850 38 H 0.147 0.853 39 H 0.136 0.864 40 H 0.223 0.777 41 H -0.186 1.186 42 H -0.182 1.182 43 H 0.152 0.848 44 H 0.154 0.846 45 H 0.117 0.883 46 H 0.095 0.905 47 H 0.148 0.852 48 H 0.143 0.857 49 H 0.143 0.857 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -6.046 0.451 2.935 6.736 hybrid contribution -0.982 0.356 -1.041 1.475 sum -7.028 0.807 1.894 7.323 Atomic orbital electron populations 1.23079 0.78197 1.04124 1.01454 1.86034 1.21429 1.26825 1.88651 1.18856 0.91800 0.84258 0.96635 1.19021 0.90098 0.95336 1.05972 1.21411 0.93988 0.95916 0.96858 0.87960 1.23597 0.95182 1.01416 0.98136 1.21868 1.00662 0.79139 0.96741 0.87476 1.45477 1.12565 1.07636 1.70631 1.20025 0.84046 0.88427 0.77182 1.90789 1.29315 1.70329 1.47942 1.22471 0.86248 0.92741 1.02417 1.86174 1.31072 1.19783 1.82973 1.19082 0.94547 0.81933 0.95532 1.21171 0.98461 0.94391 1.08491 1.20783 0.96711 0.94437 0.97329 1.20201 0.94165 0.96341 1.04935 1.24956 1.12278 0.94555 0.86196 1.86599 1.50594 1.81746 1.14740 0.95123 0.75286 0.79616 0.91657 1.20861 0.98618 0.91794 0.95631 1.20538 0.96222 0.95254 1.04384 1.23440 0.95160 1.02273 0.96394 1.20887 1.00070 0.91018 0.97823 1.21090 0.93935 0.98542 1.03618 1.20984 0.94796 0.97059 0.97283 1.21268 1.00129 0.92436 1.08735 0.88092 0.92566 0.92605 0.90719 0.88571 0.76200 0.88557 0.88706 0.85040 0.85267 0.86430 0.77673 1.18601 1.18247 0.84753 0.84623 0.88290 0.90465 0.85197 0.85728 0.85747 0.85466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.22 9.43 -19.43 -0.18 -0.41 16 3 C 0.13 0.16 6.66 -39.22 -0.26 -0.10 16 4 C -0.10 -0.06 5.30 -104.47 -0.55 -0.61 16 5 C -0.06 0.06 3.75 -90.96 -0.34 -0.28 16 6 H 0.10 -0.09 7.32 -51.93 -0.38 -0.47 16 7 C -0.14 0.12 7.25 -25.92 -0.19 -0.07 16 8 C 0.12 -0.09 4.32 -67.12 -0.29 -0.38 16 9 H 0.11 0.10 7.47 -51.92 -0.39 -0.29 16 10 N -0.71 1.08 5.26 -53.02 -0.28 0.80 16 11 C 0.52 0.70 7.91 -10.98 -0.09 0.61 16 12 O -0.51 -3.24 16.10 -14.36 -0.23 -3.47 16 13 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 14 O -0.29 -0.79 9.67 -39.32 -0.38 -1.17 16 15 C 0.13 0.22 6.69 -39.22 -0.26 -0.04 16 16 C -0.21 0.09 9.04 -39.43 -0.36 -0.27 16 17 C -0.08 0.04 8.66 -39.60 -0.34 -0.30 16 18 C -0.16 -0.04 5.39 -104.60 -0.56 -0.60 16 19 C -0.07 0.01 2.82 36.01 0.10 0.12 16 20 O -0.53 -0.71 12.77 -35.23 -0.45 -1.16 16 21 Si 0.68 -0.74 29.78 -169.99 -5.06 -5.80 16 22 C -0.05 -0.05 9.60 -39.60 -0.38 -0.43 16 23 C -0.15 -0.25 9.99 -39.43 -0.39 -0.65 16 24 C -0.13 0.25 7.29 -25.92 -0.19 0.06 16 25 C -0.08 0.00 8.61 -39.61 -0.34 -0.34 16 26 C -0.15 -0.01 10.04 -39.56 -0.40 -0.40 16 27 C -0.08 -0.01 10.04 -39.60 -0.40 -0.41 16 28 C -0.21 -0.11 9.04 -39.43 -0.36 -0.47 16 29 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 30 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 31 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.10 -0.12 6.31 -51.93 -0.33 -0.45 16 34 H 0.40 -1.78 8.70 -40.82 -0.36 -2.13 16 35 H 0.10 -0.36 7.65 -51.93 -0.40 -0.76 16 36 H 0.10 -0.33 7.68 -51.93 -0.40 -0.73 16 37 H 0.13 -0.42 6.30 -52.49 -0.33 -0.75 16 38 H 0.13 -0.33 4.87 -52.49 -0.26 -0.59 16 39 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 40 H 0.38 -0.52 8.70 45.56 0.40 -0.13 16 41 H -0.26 -0.21 7.11 56.52 0.40 0.20 16 42 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 43 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 44 H 0.14 0.18 8.06 -52.49 -0.42 -0.24 16 45 H 0.10 -0.20 7.72 -51.93 -0.40 -0.60 16 46 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.13 -0.22 6.66 -52.48 -0.35 -0.57 16 48 H 0.12 -0.19 8.06 -52.49 -0.42 -0.62 16 49 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 50 H 0.13 -0.15 6.30 -52.49 -0.33 -0.48 16 LS Contribution 410.29 15.07 6.18 6.18 Total: 0.00 -10.09 410.29 -11.71 -21.80 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -6.88 Total: -13.28 kcal Atomic # 6 Polarization: 0.94 SS G_CDS: -4.42 Total: -3.48 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.24 Total: -6.21 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.06 Total: -5.80 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -10.09 -11.71 -21.80 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_2989410.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.283 kcal (2) G-P(sol) polarization free energy of solvation -10.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.373 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.798 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.081 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds