Wall clock time and date at job start Sun Mar 7 2021 05:08:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35896 * 117.00083 * 2 1 4 4 C 1.38707 * 120.05759 * 180.02562 * 3 2 1 5 5 C 1.50700 * 120.02892 * 0.04081 * 4 3 2 6 6 H 1.09004 * 112.84634 * 348.78811 * 5 4 3 7 7 C 1.53784 * 113.61505 * 119.97741 * 5 4 3 8 8 C 1.53779 * 87.07954 * 139.98465 * 7 5 4 9 9 H 1.08999 * 113.61476 * 220.02469 * 8 7 5 10 10 N 1.46500 * 113.61582 * 89.20496 * 8 7 5 11 11 C 1.34776 * 120.00463 * 155.00102 * 10 8 7 12 12 O 1.21289 * 119.99596 * 359.97438 * 11 10 8 13 13 C 1.50699 * 120.00187 * 180.02562 * 11 10 8 14 14 C 1.53001 * 109.46815 * 179.97438 * 13 11 10 15 15 O 1.42902 * 109.46590 * 179.97438 * 14 13 11 16 16 C 1.35905 * 116.99776 * 180.02562 * 15 14 13 17 17 C 1.38734 * 120.05483 * 359.72776 * 16 15 14 18 18 C 1.38142 * 119.94277 * 179.74720 * 17 16 15 19 19 C 1.38271 * 120.05687 * 0.50341 * 18 17 16 20 20 C 1.50695 * 119.94253 * 179.74933 * 19 18 17 21 21 O 1.42901 * 109.47238 * 120.02646 * 20 19 18 22 22 Si 1.86300 * 109.47441 * 0.02562 * 20 19 18 23 23 C 1.38266 * 120.10636 * 359.77079 * 19 18 17 24 24 C 1.38134 * 120.05898 * 359.97438 * 23 19 18 25 25 C 1.53777 * 113.61891 * 217.48145 * 5 4 3 26 26 C 1.38171 * 119.94491 * 180.02562 * 4 3 2 27 27 C 1.38240 * 120.05202 * 0.02562 * 26 4 3 28 28 C 1.38288 * 120.11591 * 359.97438 * 27 26 4 29 29 C 1.38119 * 120.05366 * 0.24016 * 28 27 26 30 30 H 1.09000 * 109.47473 * 60.00460 * 1 2 3 31 31 H 1.09007 * 109.46894 * 179.97438 * 1 2 3 32 32 H 1.09000 * 109.47190 * 299.99904 * 1 2 3 33 33 H 1.08990 * 113.61801 * 254.53538 * 7 5 4 34 34 H 1.09003 * 113.61296 * 25.35529 * 7 5 4 35 35 H 0.97007 * 119.99718 * 334.99947 * 10 8 7 36 36 H 1.08999 * 109.46864 * 299.99430 * 13 11 10 37 37 H 1.09001 * 109.46799 * 59.99704 * 13 11 10 38 38 H 1.08992 * 109.47565 * 299.99855 * 14 13 11 39 39 H 1.09003 * 109.46862 * 60.00242 * 14 13 11 40 40 H 1.08000 * 120.02979 * 359.97438 * 17 16 15 41 41 H 1.08005 * 119.97275 * 180.23190 * 18 17 16 42 42 H 1.09006 * 109.46678 * 240.02315 * 20 19 18 43 43 H 0.96703 * 113.99818 * 299.99544 * 21 20 19 44 44 H 1.48504 * 109.99499 * 58.68505 * 22 20 19 45 45 H 1.48498 * 109.99713 * 180.02562 * 22 20 19 46 46 H 1.07999 * 119.96462 * 179.97438 * 23 19 18 47 47 H 1.08001 * 120.03056 * 180.02562 * 24 23 19 48 48 H 1.09006 * 113.60754 * 334.56289 * 25 5 4 49 49 H 1.08993 * 113.61762 * 105.46860 * 25 5 4 50 50 H 1.07997 * 119.96876 * 179.97438 * 26 4 3 51 51 H 1.08006 * 119.93931 * 179.97438 * 27 26 4 52 52 H 1.08002 * 119.96980 * 179.97438 * 28 27 26 53 53 H 1.07998 * 120.02956 * 179.72220 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.2537 0.0221 -0.0021 6 1 3.6593 -0.8705 0.1927 7 6 5.1794 -0.1086 -1.2231 8 6 6.2404 -0.6673 -0.2604 9 1 7.2493 -0.3105 -0.4677 10 7 6.1742 -2.1213 -0.0938 11 6 7.2735 -2.8080 0.2756 12 8 8.3177 -2.2223 0.4697 13 6 7.2055 -4.3038 0.4463 14 6 8.5788 -4.8321 0.8656 15 8 8.5141 -6.2504 1.0281 16 6 9.6582 -6.8813 1.4021 17 6 10.8206 -6.1511 1.6030 18 6 11.9810 -6.7941 1.9882 19 6 11.9872 -8.1657 2.1635 20 6 13.2559 -8.8652 2.5782 21 8 13.0452 -9.5358 3.8224 22 14 14.6212 -7.6125 2.7714 23 6 10.8314 -8.8963 1.9584 24 6 9.6672 -8.2574 1.5782 25 6 5.5272 0.1155 0.8548 26 6 4.0560 2.5171 0.0000 27 6 3.3018 3.6757 0.0016 28 6 1.9208 3.6047 0.0021 29 6 1.2914 2.3753 0.0061 30 1 -0.3634 0.5137 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 4.8321 -0.8339 -1.9587 34 1 5.4525 0.8482 -1.6684 35 1 5.3391 -2.5897 -0.2494 36 1 6.4716 -4.5488 1.2141 37 1 6.9119 -4.7642 -0.4971 38 1 9.3124 -4.5871 0.0977 39 1 8.8726 -4.3717 1.8089 40 1 10.8174 -5.0804 1.4618 41 1 12.8852 -6.2256 2.1483 42 1 13.5354 -9.5927 1.8161 43 1 12.7930 -8.9484 4.5480 44 1 14.2387 -6.5967 3.7850 45 1 15.8780 -8.2900 3.1797 46 1 10.8390 -9.9676 2.0956 47 1 8.7646 -8.8285 1.4186 48 1 5.8966 1.1336 0.9784 49 1 5.4607 -0.4290 1.7966 50 1 5.1344 2.5752 0.0000 51 1 3.7922 4.6381 0.0024 52 1 1.3339 4.5114 0.0038 53 1 0.2128 2.3203 0.0110 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_4549602.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:08:49 Heat of formation + Delta-G solvation = -58.153669 kcal Electronic energy + Delta-G solvation = -33355.536574 eV Core-core repulsion = 28739.478228 eV Total energy + Delta-G solvation = -4616.058347 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -41.79054 -41.33199 -40.81718 -39.54250 -39.08327 -38.04644 -37.29529 -34.66200 -33.34128 -32.11560 -31.78275 -31.29726 -31.05247 -28.17131 -26.90657 -26.68698 -26.17510 -25.32879 -23.65174 -23.08070 -22.56956 -22.22040 -21.53840 -20.10003 -19.55461 -19.08170 -18.45198 -17.87107 -17.48017 -17.29905 -17.16075 -16.84632 -16.69589 -16.65483 -16.35512 -16.18238 -15.97860 -15.66296 -15.36300 -15.24592 -15.14307 -14.73331 -14.62579 -14.45484 -14.31894 -14.30474 -14.09215 -13.92050 -13.49303 -13.45721 -13.15911 -13.00417 -12.85883 -12.82622 -12.73366 -12.29379 -12.28483 -12.06117 -12.02590 -11.78559 -11.75061 -11.64840 -11.61004 -11.15663 -11.06114 -10.60672 -10.12024 -10.03667 -9.76317 -9.21714 -9.07658 -4.93296 0.28032 0.30877 0.34202 0.48364 1.31724 1.50604 1.58758 1.69374 1.93955 2.37760 2.47635 2.65402 2.75850 3.42923 3.48531 3.55648 3.67238 3.69297 3.72533 3.82966 3.88475 3.91202 3.92435 4.00508 4.02619 4.10831 4.19452 4.26265 4.32158 4.34630 4.36298 4.44395 4.45702 4.49013 4.57167 4.64551 4.67489 4.69125 4.71009 4.73426 4.78803 4.79293 4.86848 4.95664 4.97917 5.01648 5.10287 5.18127 5.18952 5.29044 5.40575 5.47686 5.49066 5.59258 5.66644 5.72308 5.85263 6.32176 6.43749 6.45747 6.48808 7.14831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.330 6.330 3 C 0.112 3.888 4 C -0.116 4.116 5 C -0.058 4.058 6 H 0.100 0.900 7 C -0.125 4.125 8 C 0.118 3.882 9 H 0.091 0.909 10 N -0.699 5.699 11 C 0.523 3.477 12 O -0.581 6.581 13 C -0.133 4.133 14 C 0.073 3.927 15 O -0.321 6.321 16 C 0.123 3.877 17 C -0.210 4.210 18 C -0.080 4.080 19 C -0.159 4.159 20 C -0.074 4.074 21 O -0.548 6.548 22 Si 0.758 3.242 23 C -0.059 4.059 24 C -0.159 4.159 25 C -0.141 4.141 26 C -0.087 4.087 27 C -0.163 4.163 28 C -0.094 4.094 29 C -0.218 4.218 30 H 0.061 0.939 31 H 0.116 0.884 32 H 0.059 0.941 33 H 0.083 0.917 34 H 0.101 0.899 35 H 0.417 0.583 36 H 0.125 0.875 37 H 0.128 0.872 38 H 0.069 0.931 39 H 0.064 0.936 40 H 0.140 0.860 41 H 0.144 0.856 42 H 0.126 0.874 43 H 0.385 0.615 44 H -0.287 1.287 45 H -0.301 1.301 46 H 0.140 0.860 47 H 0.142 0.858 48 H 0.099 0.901 49 H 0.065 0.935 50 H 0.143 0.857 51 H 0.139 0.861 52 H 0.139 0.861 53 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.630 2.436 -3.342 6.986 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.244 6.244 3 C 0.066 3.934 4 C -0.116 4.116 5 C -0.077 4.077 6 H 0.118 0.882 7 C -0.162 4.162 8 C 0.013 3.987 9 H 0.109 0.891 10 N -0.351 5.351 11 C 0.310 3.690 12 O -0.460 6.460 13 C -0.172 4.172 14 C -0.002 4.002 15 O -0.235 6.235 16 C 0.078 3.922 17 C -0.228 4.228 18 C -0.097 4.097 19 C -0.160 4.160 20 C -0.183 4.183 21 O -0.357 6.357 22 Si 0.664 3.336 23 C -0.077 4.077 24 C -0.177 4.177 25 C -0.180 4.180 26 C -0.104 4.104 27 C -0.181 4.181 28 C -0.112 4.112 29 C -0.236 4.236 30 H 0.080 0.920 31 H 0.135 0.865 32 H 0.078 0.922 33 H 0.101 0.899 34 H 0.120 0.880 35 H 0.254 0.746 36 H 0.143 0.857 37 H 0.146 0.854 38 H 0.087 0.913 39 H 0.082 0.918 40 H 0.158 0.842 41 H 0.161 0.839 42 H 0.144 0.856 43 H 0.234 0.766 44 H -0.214 1.214 45 H -0.230 1.230 46 H 0.158 0.842 47 H 0.159 0.841 48 H 0.117 0.883 49 H 0.083 0.917 50 H 0.161 0.839 51 H 0.157 0.843 52 H 0.157 0.843 53 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -4.307 2.429 -3.080 5.825 hybrid contribution -1.284 0.080 1.144 1.722 sum -5.591 2.509 -1.936 6.427 Atomic orbital electron populations 1.23278 0.76935 1.05353 1.01892 1.86012 1.22844 1.26812 1.88715 1.19105 0.92331 0.84694 0.97227 1.19258 0.90271 0.96055 1.06065 1.21349 0.93713 0.95355 0.97255 0.88212 1.23370 0.94308 1.02480 0.96090 1.21811 0.99868 0.79993 0.97065 0.89122 1.45564 1.13134 1.07313 1.69082 1.20636 0.83156 0.89871 0.75287 1.90737 1.31268 1.72043 1.52002 1.21435 0.98231 0.90466 1.07092 1.22454 0.98349 0.77544 1.01899 1.85959 1.31953 1.22419 1.83187 1.19193 0.85409 0.92524 0.95097 1.21417 0.92969 1.01159 1.07277 1.20994 0.97848 0.93766 0.97103 1.20258 0.96739 0.93875 1.05093 1.25097 1.00592 1.04665 0.87975 1.86560 1.90836 1.38406 1.19848 0.94157 0.74217 0.76274 0.88918 1.20970 0.90919 1.00614 0.95188 1.20669 1.00200 0.91434 1.05407 1.23565 0.95296 1.01471 0.97657 1.21104 1.00851 0.90896 0.97588 1.21361 0.94139 0.99262 1.03371 1.21256 0.95205 0.97576 0.97153 1.21494 1.00899 0.92485 1.08753 0.92045 0.86547 0.92200 0.89878 0.88037 0.74562 0.85695 0.85385 0.91287 0.91750 0.84228 0.83926 0.85581 0.76569 1.21375 1.22961 0.84190 0.84053 0.88296 0.91660 0.83893 0.84319 0.84273 0.84321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.71 9.43 -92.38 -0.87 -1.58 16 3 C 0.11 0.36 6.66 22.51 0.15 0.51 16 4 C -0.12 -0.20 5.30 -19.77 -0.10 -0.30 16 5 C -0.06 0.08 3.75 -11.01 -0.04 0.04 16 6 H 0.10 -0.09 7.33 -2.38 -0.02 -0.11 16 7 C -0.12 0.44 7.29 31.12 0.23 0.67 16 8 C 0.12 -0.17 4.32 45.52 0.20 0.02 16 9 H 0.09 0.20 7.46 -2.39 -0.02 0.18 16 10 N -0.70 2.29 5.27 -440.03 -2.32 -0.03 16 11 C 0.52 0.43 7.83 87.66 0.69 1.12 16 12 O -0.58 -5.53 15.58 -3.06 -0.05 -5.58 16 13 C -0.13 0.55 6.07 29.85 0.18 0.73 16 14 C 0.07 0.05 4.03 71.98 0.29 0.34 16 15 O -0.32 -1.08 10.14 -92.48 -0.94 -2.02 16 16 C 0.12 0.53 6.69 22.51 0.15 0.68 16 17 C -0.21 -0.63 9.04 22.37 0.20 -0.43 16 18 C -0.08 -0.12 8.66 22.25 0.19 0.08 16 19 C -0.16 -0.28 5.39 -19.85 -0.11 -0.38 16 20 C -0.07 -0.04 2.82 71.23 0.20 0.16 16 21 O -0.55 -1.94 12.77 -148.98 -1.90 -3.85 16 22 Si 0.76 -0.24 29.78 68.60 2.04 1.81 16 23 C -0.06 -0.13 9.60 22.25 0.21 0.08 16 24 C -0.16 -0.49 9.99 22.36 0.22 -0.27 16 25 C -0.14 0.18 7.26 31.12 0.23 0.41 16 26 C -0.09 -0.01 8.61 22.25 0.19 0.18 16 27 C -0.16 -0.01 10.04 22.28 0.22 0.22 16 28 C -0.09 -0.04 10.04 22.25 0.22 0.18 16 29 C -0.22 -0.33 9.04 22.37 0.20 -0.12 16 30 H 0.06 -0.33 7.68 -2.39 -0.02 -0.35 16 31 H 0.12 -0.89 8.14 -2.38 -0.02 -0.91 16 32 H 0.06 -0.30 7.65 -2.39 -0.02 -0.32 16 33 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 34 H 0.10 -0.40 7.72 -2.39 -0.02 -0.42 16 35 H 0.42 -3.54 8.70 -92.70 -0.81 -4.35 16 36 H 0.12 -0.93 8.14 -2.39 -0.02 -0.95 16 37 H 0.13 -1.01 8.14 -2.39 -0.02 -1.03 16 38 H 0.07 0.11 7.61 -2.39 -0.02 0.09 16 39 H 0.06 0.15 7.63 -2.39 -0.02 0.13 16 40 H 0.14 0.18 6.30 -2.91 -0.02 0.16 16 41 H 0.14 -0.32 4.87 -2.91 -0.01 -0.33 16 42 H 0.13 -0.16 7.96 -2.38 -0.02 -0.18 16 43 H 0.39 -0.63 8.70 -74.06 -0.64 -1.28 16 44 H -0.29 -1.14 7.11 99.48 0.71 -0.43 16 45 H -0.30 -2.15 7.11 99.48 0.71 -1.44 16 46 H 0.14 0.05 8.06 -2.91 -0.02 0.02 16 47 H 0.14 0.09 8.06 -2.91 -0.02 0.07 16 48 H 0.10 -0.21 6.31 -2.38 -0.02 -0.23 16 49 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 50 H 0.14 -0.51 6.66 -2.91 -0.02 -0.53 16 51 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 52 H 0.14 -0.48 8.06 -2.91 -0.02 -0.51 16 53 H 0.14 -0.28 6.30 -2.91 -0.02 -0.30 16 Total: 0.00 -20.58 431.24 0.35 -20.23 By element: Atomic # 1 Polarization: -13.45 SS G_CDS: -0.46 Total: -13.91 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: 4.84 Total: 4.93 kcal Atomic # 7 Polarization: 2.29 SS G_CDS: -2.32 Total: -0.03 kcal Atomic # 8 Polarization: -9.27 SS G_CDS: -3.76 Total: -13.03 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: 2.04 Total: 1.81 kcal Total: -20.58 0.35 -20.23 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_4549602.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.922 kcal (2) G-P(sol) polarization free energy of solvation -20.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.232 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds