Wall clock time and date at job start Sun Mar 7 2021 05:09:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 116.99930 * 2 1 4 4 C 1.38708 * 120.05461 * 180.02562 * 3 2 1 5 5 C 1.50708 * 120.02785 * 359.97438 * 4 3 2 6 6 H 1.08997 * 112.84646 * 11.19326 * 5 4 3 7 7 C 1.53774 * 113.61514 * 142.50530 * 5 4 3 8 8 C 1.53783 * 87.08390 * 139.98124 * 7 5 4 9 9 H 1.08997 * 113.69007 * 220.01118 * 8 7 5 10 10 N 1.46499 * 113.61597 * 89.11464 * 8 7 5 11 11 C 1.34776 * 119.99796 * 107.50604 * 10 8 7 12 12 O 1.21274 * 120.00222 * 0.02562 * 11 10 8 13 13 C 1.50705 * 119.99507 * 179.97438 * 11 10 8 14 14 F 1.39896 * 109.47016 * 299.99746 * 13 11 10 15 15 F 1.39898 * 109.46771 * 59.99970 * 13 11 10 16 16 O 1.42899 * 109.46834 * 179.97438 * 13 11 10 17 17 C 1.35897 * 116.99990 * 179.97438 * 16 13 11 18 18 C 1.38731 * 120.05444 * 359.73347 * 17 16 13 19 19 C 1.38152 * 119.94269 * 179.69985 * 18 17 16 20 20 C 1.38265 * 120.05324 * 0.59167 * 19 18 17 21 21 C 1.50697 * 119.94384 * 179.70457 * 20 19 18 22 22 O 1.42904 * 109.47534 * 119.97768 * 21 20 19 23 23 Si 1.86306 * 109.47053 * 359.97438 * 21 20 19 24 24 C 1.38271 * 120.11314 * 359.68168 * 20 19 18 25 25 C 1.38146 * 120.05370 * 0.02562 * 24 20 19 26 26 C 1.53781 * 87.07772 * 334.56502 * 8 7 5 27 27 C 1.38163 * 119.94499 * 179.97438 * 4 3 2 28 28 C 1.38243 * 120.05438 * 0.02562 * 27 4 3 29 29 C 1.38289 * 120.11362 * 359.97438 * 28 27 4 30 30 C 1.38125 * 120.05159 * 0.02562 * 29 28 27 31 31 H 1.08998 * 109.46876 * 179.97438 * 1 2 3 32 32 H 1.08998 * 109.47294 * 300.00489 * 1 2 3 33 33 H 1.08995 * 109.47056 * 60.00501 * 1 2 3 34 34 H 1.08999 * 113.61556 * 254.52741 * 7 5 4 35 35 H 1.09003 * 113.61429 * 25.42901 * 7 5 4 36 36 H 0.96996 * 119.99511 * 287.50189 * 10 8 7 37 37 H 1.08000 * 120.03178 * 359.97438 * 18 17 16 38 38 H 1.07996 * 119.97120 * 180.31684 * 19 18 17 39 39 H 1.09006 * 109.47374 * 239.97788 * 21 20 19 40 40 H 0.96707 * 113.99562 * 300.00091 * 22 21 20 41 41 H 1.48498 * 109.99678 * 179.97438 * 23 21 20 42 42 H 1.48492 * 109.99945 * 301.32174 * 23 21 20 43 43 H 1.08002 * 119.97210 * 180.02562 * 24 20 19 44 44 H 1.07996 * 120.02378 * 180.02562 * 25 24 20 45 45 H 1.09002 * 113.61972 * 270.88351 * 26 8 7 46 46 H 1.09001 * 113.61568 * 139.98199 * 26 8 7 47 47 H 1.08001 * 119.97024 * 180.02562 * 27 4 3 48 48 H 1.08004 * 119.94070 * 180.02562 * 28 27 4 49 49 H 1.07993 * 119.96940 * 180.28495 * 29 28 27 50 50 H 1.08000 * 120.02328 * 179.97438 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 -0.0005 5 6 4.2537 0.0221 -0.0005 6 1 3.6591 -0.8704 -0.1951 7 6 5.5263 0.1159 -0.8587 8 6 6.2407 -0.6675 0.2553 9 1 7.2500 -0.3120 0.4626 10 7 6.1730 -2.1212 0.0865 11 6 7.2715 -2.8083 -0.2844 12 8 8.3161 -2.2234 -0.4781 13 6 7.2020 -4.3038 -0.4574 14 9 6.8253 -4.8962 0.7527 15 9 6.2592 -4.6158 -1.4428 16 8 8.4836 -4.7978 -0.8516 17 6 8.5939 -6.1375 -1.0506 18 6 7.4927 -6.9606 -0.8649 19 6 7.6058 -8.3215 -1.0738 20 6 8.8184 -8.8649 -1.4559 21 6 8.9407 -10.3506 -1.6767 22 8 9.3399 -10.6005 -3.0259 23 14 7.2956 -11.1637 -1.3551 24 6 9.9190 -8.0475 -1.6362 25 6 9.8094 -6.6852 -1.4343 26 6 5.1807 -0.1092 1.2195 27 6 4.0560 2.5171 -0.0011 28 6 3.3019 3.6757 -0.0005 29 6 1.9209 3.6047 0.0000 30 6 1.2914 2.3752 0.0005 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3634 0.5139 0.8899 33 1 -0.3633 0.5137 -0.8900 34 1 5.4588 -0.4282 -1.8007 35 1 5.8955 1.1340 -0.9822 36 1 5.3377 -2.5890 0.2419 37 1 6.5466 -6.5372 -0.5615 38 1 6.7475 -8.9619 -0.9343 39 1 9.6872 -10.7590 -0.9954 40 1 8.7208 -10.2636 -3.6880 41 1 7.4028 -12.6291 -1.5701 42 1 6.8543 -10.8847 0.0350 43 1 10.8650 -8.4743 -1.9350 44 1 10.6692 -6.0472 -1.5757 45 1 5.4554 0.8474 1.6641 46 1 4.8341 -0.8350 1.9551 47 1 5.1344 2.5751 -0.0019 48 1 3.7923 4.6380 -0.0014 49 1 1.3341 4.5113 -0.0042 50 1 0.2128 2.3203 0.0014 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_4549640.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:09:34 Heat of formation + Delta-G solvation = -139.894472 kcal Electronic energy + Delta-G solvation = -38002.355819 eV Core-core repulsion = 32599.382593 eV Total energy + Delta-G solvation = -5402.973226 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.147 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -50.91539 -48.88512 -41.91020 -41.39707 -41.00250 -39.68321 -39.16794 -38.06944 -37.24355 -35.04702 -32.47233 -32.11488 -31.89473 -31.03956 -29.16184 -28.13340 -26.74003 -26.56078 -25.92900 -24.54798 -23.30272 -22.86761 -22.59192 -22.40208 -20.66939 -20.43431 -19.71489 -19.69768 -19.06399 -18.54731 -17.77142 -17.42168 -17.23635 -16.89495 -16.74372 -16.65829 -16.55530 -16.39555 -16.19867 -15.85155 -15.71429 -15.45139 -15.37670 -15.35196 -15.27096 -15.13828 -15.12285 -14.93068 -14.42834 -14.37113 -14.34890 -14.23535 -14.06480 -13.60631 -13.51618 -13.22838 -13.03523 -13.01246 -12.78097 -12.40025 -12.31730 -12.15155 -12.02528 -11.92285 -11.82721 -11.72676 -11.54148 -11.22337 -10.50148 -10.47315 -10.20134 -9.75782 -9.59016 -9.06758 -5.01116 0.00627 0.14558 0.35266 0.43104 0.49783 0.60191 1.30054 1.61944 1.65803 1.95149 1.96760 2.38716 2.45096 2.72767 2.76819 3.19823 3.38098 3.48292 3.53711 3.59294 3.64427 3.65750 3.74139 3.90701 3.97156 4.07975 4.08837 4.19459 4.20148 4.31807 4.36747 4.39327 4.43620 4.45704 4.50777 4.52073 4.67667 4.73068 4.74021 4.78250 4.81709 4.83755 4.89511 4.98968 5.01726 5.03392 5.11362 5.30528 5.33542 5.38014 5.41809 5.58474 5.63907 5.79884 5.84113 5.86752 6.42266 6.44663 6.76650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.330 6.330 3 C 0.112 3.888 4 C -0.115 4.115 5 C -0.062 4.062 6 H 0.099 0.901 7 C -0.139 4.139 8 C 0.113 3.887 9 H 0.107 0.893 10 N -0.670 5.670 11 C 0.520 3.480 12 O -0.505 6.505 13 C 0.435 3.565 14 F -0.172 7.172 15 F -0.169 7.169 16 O -0.304 6.304 17 C 0.085 3.915 18 C -0.193 4.193 19 C -0.078 4.078 20 C -0.141 4.141 21 C -0.068 4.068 22 O -0.554 6.554 23 Si 0.771 3.229 24 C -0.058 4.058 25 C -0.135 4.135 26 C -0.122 4.122 27 C -0.085 4.085 28 C -0.163 4.163 29 C -0.094 4.094 30 C -0.218 4.218 31 H 0.115 0.885 32 H 0.061 0.939 33 H 0.059 0.941 34 H 0.069 0.931 35 H 0.110 0.890 36 H 0.422 0.578 37 H 0.142 0.858 38 H 0.154 0.846 39 H 0.112 0.888 40 H 0.396 0.604 41 H -0.297 1.297 42 H -0.285 1.285 43 H 0.150 0.850 44 H 0.145 0.855 45 H 0.113 0.887 46 H 0.085 0.915 47 H 0.147 0.853 48 H 0.139 0.861 49 H 0.138 0.862 50 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.758 2.648 0.047 7.259 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.244 6.244 3 C 0.067 3.933 4 C -0.116 4.116 5 C -0.080 4.080 6 H 0.118 0.882 7 C -0.177 4.177 8 C 0.009 3.991 9 H 0.125 0.875 10 N -0.323 5.323 11 C 0.298 3.702 12 O -0.378 6.378 13 C 0.357 3.643 14 F -0.153 7.153 15 F -0.151 7.151 16 O -0.221 6.221 17 C 0.042 3.958 18 C -0.212 4.212 19 C -0.095 4.095 20 C -0.142 4.142 21 C -0.179 4.179 22 O -0.362 6.362 23 Si 0.677 3.323 24 C -0.076 4.076 25 C -0.154 4.154 26 C -0.160 4.160 27 C -0.102 4.102 28 C -0.181 4.181 29 C -0.112 4.112 30 C -0.237 4.237 31 H 0.134 0.866 32 H 0.080 0.920 33 H 0.078 0.922 34 H 0.088 0.912 35 H 0.129 0.871 36 H 0.260 0.740 37 H 0.159 0.841 38 H 0.171 0.829 39 H 0.129 0.871 40 H 0.246 0.754 41 H -0.225 1.225 42 H -0.212 1.212 43 H 0.167 0.833 44 H 0.163 0.837 45 H 0.131 0.869 46 H 0.104 0.896 47 H 0.165 0.835 48 H 0.157 0.843 49 H 0.156 0.844 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -5.768 2.157 0.668 6.194 hybrid contribution -0.490 -0.041 0.357 0.608 sum -6.258 2.116 1.025 6.685 Atomic orbital electron populations 1.23268 0.76971 1.05298 1.01896 1.86014 1.22817 1.26879 1.88716 1.19113 0.92384 0.84642 0.97183 1.19207 0.90168 0.95948 1.06289 1.21397 0.93879 0.95596 0.97178 0.88249 1.23607 0.94851 1.01816 0.97460 1.22151 1.01426 0.77053 0.98457 0.87493 1.45460 1.11639 1.08736 1.66470 1.19361 0.85688 0.85505 0.79629 1.90851 1.30082 1.68254 1.48607 1.21738 0.76850 0.91155 0.74524 1.93195 1.91085 1.85601 1.45428 1.93199 1.65521 1.93944 1.62415 1.86645 1.29420 1.23050 1.83002 1.19248 0.96450 0.80344 0.99725 1.21612 0.98195 0.95306 1.06049 1.21027 0.97491 0.94005 0.96986 1.20498 0.93937 0.97023 1.02732 1.25118 1.11757 0.93660 0.87321 1.86475 1.53136 1.82042 1.14531 0.93766 0.78860 0.77072 0.82608 1.21049 0.99518 0.91235 0.95792 1.20704 0.95613 0.95964 1.03093 1.23424 0.93595 1.02888 0.96048 1.21122 1.00999 0.90726 0.97390 1.21367 0.94077 0.99341 1.03325 1.21257 0.95289 0.97518 0.97100 1.21485 1.00872 0.92518 1.08816 0.86647 0.92048 0.92187 0.91202 0.87148 0.74016 0.84080 0.82884 0.87064 0.75411 1.22489 1.21157 0.83252 0.83736 0.86918 0.89605 0.83498 0.84285 0.84376 0.84436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.57 9.43 -92.41 -0.87 -1.44 16 3 C 0.11 0.27 6.66 22.50 0.15 0.42 16 4 C -0.12 -0.05 5.30 -19.77 -0.10 -0.16 16 5 C -0.06 0.16 3.75 -11.01 -0.04 0.12 16 6 H 0.10 -0.17 7.32 -2.39 -0.02 -0.19 16 7 C -0.14 0.42 7.25 31.12 0.23 0.65 16 8 C 0.11 -0.30 4.32 45.52 0.20 -0.11 16 9 H 0.11 -0.07 7.46 -2.39 -0.02 -0.09 16 10 N -0.67 1.07 5.26 -440.04 -2.32 -1.24 16 11 C 0.52 2.53 7.34 87.66 0.64 3.18 16 12 O -0.50 -5.97 16.10 16.02 0.26 -5.71 16 13 C 0.44 1.99 2.05 71.24 0.15 2.14 16 14 F -0.17 -0.53 15.27 44.97 0.69 0.16 16 15 F -0.17 -0.45 15.31 44.97 0.69 0.24 16 16 O -0.30 -2.67 9.60 -73.35 -0.70 -3.37 16 17 C 0.08 0.54 6.48 22.51 0.15 0.69 16 18 C -0.19 -0.64 8.26 22.37 0.18 -0.46 16 19 C -0.08 -0.01 8.66 22.26 0.19 0.18 16 20 C -0.14 -0.06 5.39 -19.85 -0.11 -0.17 16 21 C -0.07 0.07 2.82 71.23 0.20 0.27 16 22 O -0.55 0.27 12.77 -148.98 -1.90 -1.63 16 23 Si 0.77 -1.95 29.78 68.60 2.04 0.10 16 24 C -0.06 -0.10 9.60 22.26 0.21 0.12 16 25 C -0.14 -0.57 9.99 22.37 0.22 -0.34 16 26 C -0.12 0.62 7.29 31.12 0.23 0.85 16 27 C -0.08 0.12 8.61 22.25 0.19 0.31 16 28 C -0.16 0.17 10.04 22.28 0.22 0.39 16 29 C -0.09 0.03 10.04 22.25 0.22 0.25 16 30 C -0.22 -0.19 9.04 22.36 0.20 0.01 16 31 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 32 H 0.06 -0.34 7.66 -2.39 -0.02 -0.36 16 33 H 0.06 -0.32 7.66 -2.39 -0.02 -0.33 16 34 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 35 H 0.11 -0.54 6.31 -2.39 -0.02 -0.55 16 36 H 0.42 -2.56 8.70 -92.71 -0.81 -3.37 16 37 H 0.14 0.22 5.10 -2.91 -0.01 0.20 16 38 H 0.15 -0.71 4.87 -2.91 -0.01 -0.72 16 39 H 0.11 -0.03 7.96 -2.38 -0.02 -0.05 16 40 H 0.40 -3.28 8.70 -74.05 -0.64 -3.93 16 41 H -0.30 -1.46 7.11 99.48 0.71 -0.75 16 42 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 43 H 0.15 -0.12 8.06 -2.91 -0.02 -0.15 16 44 H 0.14 0.35 8.06 -2.91 -0.02 0.32 16 45 H 0.11 -0.73 7.72 -2.39 -0.02 -0.75 16 46 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 47 H 0.15 -0.85 6.66 -2.91 -0.02 -0.87 16 48 H 0.14 -0.65 8.06 -2.91 -0.02 -0.67 16 49 H 0.14 -0.55 8.06 -2.91 -0.02 -0.57 16 50 H 0.14 -0.33 6.30 -2.91 -0.02 -0.35 16 Total: 0.00 -20.06 419.56 1.95 -18.10 By element: Atomic # 1 Polarization: -14.19 SS G_CDS: -0.38 Total: -14.57 kcal Atomic # 6 Polarization: 4.93 SS G_CDS: 4.45 Total: 9.38 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -2.32 Total: -1.24 kcal Atomic # 8 Polarization: -8.94 SS G_CDS: -3.22 Total: -12.16 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 1.38 Total: 0.40 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: 2.04 Total: 0.10 kcal Total: -20.06 1.95 -18.10 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_4549640.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.790 kcal (2) G-P(sol) polarization free energy of solvation -20.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.953 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.105 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds