Wall clock time and date at job start Sun Mar 7 2021 05:10:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 116.99731 * 2 1 4 4 C 1.38709 * 120.05498 * 179.97438 * 3 2 1 5 5 C 1.50702 * 120.02929 * 359.74738 * 4 3 2 6 6 H 1.09001 * 112.84373 * 11.19560 * 5 4 3 7 7 C 1.53781 * 113.61558 * 142.50258 * 5 4 3 8 8 C 1.53774 * 87.07959 * 139.98205 * 7 5 4 9 9 H 1.08999 * 113.61196 * 220.01617 * 8 7 5 10 10 N 1.46500 * 113.69159 * 89.13226 * 8 7 5 11 11 C 1.34773 * 120.00521 * 107.45773 * 10 8 7 12 12 O 1.21696 * 119.99929 * 355.27663 * 11 10 8 13 13 C 1.46674 * 120.00347 * 175.27019 * 11 10 8 14 14 C 1.37883 * 126.22095 * 4.86368 * 13 11 10 15 15 C 1.39875 * 107.09091 * 179.97438 * 14 13 11 16 16 Br 1.89102 * 126.07684 * 180.02562 * 15 14 13 17 17 C 1.35502 * 107.85411 * 0.02562 * 15 14 13 18 18 C 1.50702 * 125.57435 * 179.97438 * 17 15 14 19 19 O 1.42904 * 109.46991 * 295.86931 * 18 17 15 20 20 Si 1.86298 * 109.47261 * 55.86670 * 18 17 15 21 21 N 1.35599 * 108.85428 * 359.75410 * 17 15 14 22 22 C 1.46506 * 125.67607 * 180.24433 * 21 17 15 23 23 C 1.53773 * 113.61347 * 239.99990 * 5 4 3 24 24 C 1.38165 * 119.94319 * 179.72360 * 4 3 2 25 25 C 1.38250 * 120.05519 * 0.02562 * 24 4 3 26 26 C 1.38285 * 120.10982 * 359.97034 * 25 24 4 27 27 C 1.38115 * 120.05773 * 0.05143 * 26 25 24 28 28 H 1.09003 * 109.47044 * 179.97438 * 1 2 3 29 29 H 1.08993 * 109.47745 * 299.99845 * 1 2 3 30 30 H 1.08997 * 109.47034 * 60.00222 * 1 2 3 31 31 H 1.09000 * 113.61074 * 254.53552 * 7 5 4 32 32 H 1.09005 * 113.61215 * 25.43172 * 7 5 4 33 33 H 0.97009 * 119.99646 * 287.46199 * 10 8 7 34 34 H 1.08004 * 126.45616 * 359.94446 * 14 13 11 35 35 H 1.09003 * 109.47358 * 175.87064 * 18 17 15 36 36 H 0.96693 * 114.00059 * 59.99711 * 19 18 17 37 37 H 1.48501 * 109.99573 * 63.70210 * 20 18 17 38 38 H 1.48495 * 110.00100 * 185.02006 * 20 18 17 39 39 H 1.09007 * 109.46944 * 263.67305 * 22 21 17 40 40 H 1.08997 * 109.46975 * 23.67076 * 22 21 17 41 41 H 1.08997 * 109.47324 * 143.67532 * 22 21 17 42 42 H 1.08995 * 113.62065 * 334.56573 * 23 5 4 43 43 H 1.08999 * 113.61562 * 105.47434 * 23 5 4 44 44 H 1.07998 * 119.97041 * 180.02562 * 24 4 3 45 45 H 1.08000 * 119.94137 * 180.02562 * 25 24 4 46 46 H 1.08003 * 119.96651 * 180.02562 * 26 25 24 47 47 H 1.08000 * 120.02636 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4311 1.2849 0.0005 5 6 4.2537 0.0223 0.0069 6 1 3.6593 -0.8711 -0.1844 7 6 5.5272 0.1125 -0.8505 8 6 6.2404 -0.6660 0.2676 9 1 7.2493 -0.3084 0.4734 10 7 6.1743 -2.1206 0.1066 11 6 7.2735 -2.8087 -0.2603 12 8 8.2978 -2.2146 -0.5412 13 6 7.2354 -4.2737 -0.3209 14 6 6.1265 -5.0688 -0.1227 15 6 6.5404 -6.3964 -0.2734 16 35 5.4446 -7.9294 -0.1136 17 6 7.8659 -6.3890 -0.5542 18 6 8.7185 -7.6087 -0.7923 19 8 8.7700 -8.3940 0.4005 20 14 7.9819 -8.6218 -2.1713 21 7 8.2990 -5.1046 -0.5908 22 6 9.6712 -4.6731 -0.8685 23 6 5.1795 -0.1036 1.2283 24 6 4.0558 2.5172 -0.0052 25 6 3.3017 3.6759 -0.0110 26 6 1.9207 3.6047 -0.0116 27 6 1.2913 2.3753 -0.0054 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 5.4605 -0.4357 -1.7902 32 1 5.8965 1.1301 -0.9781 33 1 5.3392 -2.5885 0.2640 34 1 5.1268 -4.7303 0.1062 35 1 9.7268 -7.2992 -1.0673 36 1 7.9063 -8.7046 0.7046 37 1 8.0047 -7.8475 -3.4383 38 1 8.7430 -9.8863 -2.3351 39 1 10.1957 -4.5023 0.0717 40 1 10.1873 -5.4468 -1.4370 41 1 9.6517 -3.7493 -1.4466 42 1 5.4538 0.8548 1.6690 43 1 4.8323 -0.8262 1.9667 44 1 5.1343 2.5753 -0.0052 45 1 3.7920 4.6382 -0.0159 46 1 1.3338 4.5114 -0.0166 47 1 0.2127 2.3203 -0.0063 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_5000100.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:00 Heat of formation + Delta-G solvation = 10.709082 kcal Electronic energy + Delta-G solvation = -31577.460276 eV Core-core repulsion = 27161.590080 eV Total energy + Delta-G solvation = -4415.870196 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.072 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.91069 -41.67544 -40.64789 -39.26206 -38.05204 -37.89304 -35.13010 -34.24939 -32.46124 -31.68383 -31.03394 -30.94750 -28.16542 -27.47020 -27.34150 -26.68071 -25.84361 -23.71085 -23.02975 -22.56994 -21.61150 -20.67555 -20.03551 -19.18262 -18.96803 -18.23922 -17.55784 -17.25176 -17.02838 -16.69194 -16.63051 -16.60324 -16.01024 -15.74496 -15.61736 -15.33890 -15.07099 -14.97370 -14.82239 -14.61427 -14.38861 -14.29596 -14.13166 -14.00484 -13.84430 -13.46286 -13.25911 -13.14691 -12.97543 -12.73948 -12.63595 -12.38571 -12.28098 -12.01126 -12.00076 -11.75903 -11.64986 -11.54265 -11.18512 -11.15419 -10.89650 -10.22824 -9.85372 -9.74850 -9.35001 -9.05470 -5.01673 0.10862 0.36135 0.47709 0.50467 0.89177 1.14661 1.45054 1.55247 1.83419 2.10892 2.21722 2.40448 2.77727 3.14691 3.38293 3.46996 3.51443 3.62994 3.68607 3.71869 3.83445 3.93652 4.01615 4.10570 4.12322 4.21052 4.23373 4.34318 4.37347 4.39058 4.47331 4.50074 4.54249 4.59375 4.67686 4.72326 4.75859 4.80466 4.85321 4.94660 5.03014 5.11738 5.17129 5.26553 5.42431 5.45870 5.55395 5.60644 5.67093 5.74741 5.87226 6.35771 6.37111 6.46228 7.01291 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.329 6.329 3 C 0.113 3.887 4 C -0.116 4.116 5 C -0.058 4.058 6 H 0.100 0.900 7 C -0.141 4.141 8 C 0.122 3.878 9 H 0.094 0.906 10 N -0.686 5.686 11 C 0.593 3.407 12 O -0.575 6.575 13 C -0.055 4.055 14 C -0.093 4.093 15 C -0.184 4.184 16 Br 0.033 6.967 17 C 0.050 3.950 18 C -0.053 4.053 19 O -0.540 6.540 20 Si 0.718 3.282 21 N -0.397 5.397 22 C 0.060 3.940 23 C -0.123 4.123 24 C -0.086 4.086 25 C -0.164 4.164 26 C -0.094 4.094 27 C -0.218 4.218 28 H 0.116 0.884 29 H 0.061 0.939 30 H 0.059 0.941 31 H 0.064 0.936 32 H 0.101 0.899 33 H 0.416 0.584 34 H 0.184 0.816 35 H 0.123 0.877 36 H 0.388 0.612 37 H -0.278 1.278 38 H -0.262 1.262 39 H 0.087 0.913 40 H 0.103 0.897 41 H 0.097 0.903 42 H 0.105 0.895 43 H 0.084 0.916 44 H 0.144 0.856 45 H 0.138 0.862 46 H 0.139 0.861 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.845 1.019 1.399 6.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.242 6.242 3 C 0.068 3.932 4 C -0.117 4.117 5 C -0.076 4.076 6 H 0.119 0.881 7 C -0.179 4.179 8 C 0.017 3.983 9 H 0.112 0.888 10 N -0.336 5.336 11 C 0.381 3.619 12 O -0.456 6.456 13 C -0.169 4.169 14 C -0.120 4.120 15 C -0.270 4.270 16 Br 0.117 6.883 17 C -0.072 4.072 18 C -0.163 4.163 19 O -0.347 6.347 20 Si 0.618 3.382 21 N -0.070 5.070 22 C -0.080 4.080 23 C -0.161 4.161 24 C -0.104 4.104 25 C -0.182 4.182 26 C -0.112 4.112 27 C -0.236 4.236 28 H 0.135 0.865 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.083 0.917 32 H 0.120 0.880 33 H 0.254 0.746 34 H 0.202 0.798 35 H 0.140 0.860 36 H 0.239 0.761 37 H -0.203 1.203 38 H -0.188 1.188 39 H 0.105 0.895 40 H 0.122 0.878 41 H 0.115 0.885 42 H 0.123 0.877 43 H 0.103 0.897 44 H 0.161 0.839 45 H 0.156 0.844 46 H 0.157 0.843 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -4.314 0.583 0.387 4.370 hybrid contribution 0.090 0.882 0.125 0.895 sum -4.223 1.464 0.512 4.499 Atomic orbital electron populations 1.23275 0.76959 1.05362 1.01856 1.86019 1.22811 1.26741 1.88676 1.19101 0.92310 0.84712 0.97116 1.19245 0.90284 0.96003 1.06123 1.21347 0.93694 0.95445 0.97107 0.88134 1.23572 0.95288 1.01491 0.97570 1.21859 1.00221 0.78780 0.97460 0.88831 1.45206 1.12236 1.07484 1.68710 1.16963 0.83651 0.84876 0.76382 1.90805 1.32665 1.71135 1.51024 1.20122 0.88619 0.91129 1.17057 1.21524 0.98682 0.89789 1.02016 1.20839 0.93199 0.94193 1.18739 1.96614 1.64079 1.31976 1.95678 1.21084 0.94264 0.86024 1.05804 1.24846 1.02881 0.90865 0.97687 1.86513 1.36176 1.69681 1.42320 0.93152 0.91800 0.78516 0.74695 1.43959 1.09442 1.04517 1.49117 1.22457 0.78359 1.03185 1.04029 1.23389 0.94072 1.02555 0.96115 1.21103 1.00856 0.90878 0.97565 1.21356 0.94144 0.99248 1.03451 1.21251 0.95201 0.97579 0.97159 1.21489 1.00897 0.92475 1.08763 0.86527 0.92054 0.92250 0.91739 0.88034 0.74597 0.79839 0.85956 0.76148 1.20338 1.18753 0.89490 0.87814 0.88451 0.87696 0.89724 0.83864 0.84375 0.84324 0.84323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.67 9.43 -92.47 -0.87 -1.54 16 3 C 0.11 0.35 6.66 22.51 0.15 0.50 16 4 C -0.12 -0.19 5.30 -19.77 -0.10 -0.30 16 5 C -0.06 0.07 3.75 -11.02 -0.04 0.03 16 6 H 0.10 -0.08 7.32 -2.39 -0.02 -0.09 16 7 C -0.14 0.13 7.26 31.12 0.23 0.35 16 8 C 0.12 -0.10 4.29 45.51 0.20 0.10 16 9 H 0.09 0.21 7.52 -2.39 -0.02 0.19 16 10 N -0.69 0.54 5.25 -444.02 -2.33 -1.79 16 11 C 0.59 3.02 7.77 86.45 0.67 3.69 16 12 O -0.58 -6.62 14.43 -4.33 -0.06 -6.68 16 13 C -0.06 -0.20 6.88 40.35 0.28 0.08 16 14 C -0.09 0.04 10.34 22.58 0.23 0.27 16 15 C -0.18 -0.12 6.04 22.03 0.13 0.01 16 16 Br 0.03 -0.10 29.42 -20.37 -0.60 -0.70 16 17 C 0.05 0.14 5.46 41.34 0.23 0.36 16 18 C -0.05 -0.09 2.82 71.24 0.20 0.11 16 19 O -0.54 -1.56 12.88 -148.98 -1.92 -3.48 16 20 Si 0.72 1.02 29.79 68.60 2.04 3.07 16 21 N -0.40 -1.66 3.16 -519.60 -1.64 -3.30 16 22 C 0.06 0.10 10.24 127.77 1.31 1.40 16 23 C -0.12 0.42 7.29 31.12 0.23 0.65 16 24 C -0.09 0.00 8.61 22.26 0.19 0.19 16 25 C -0.16 -0.01 10.04 22.28 0.22 0.21 16 26 C -0.09 -0.04 10.04 22.25 0.22 0.18 16 27 C -0.22 -0.32 9.04 22.36 0.20 -0.12 16 28 H 0.12 -0.89 8.14 -2.39 -0.02 -0.91 16 29 H 0.06 -0.33 7.67 -2.39 -0.02 -0.35 16 30 H 0.06 -0.30 7.65 -2.39 -0.02 -0.32 16 31 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 32 H 0.10 -0.22 6.31 -2.38 -0.02 -0.23 16 33 H 0.42 -2.36 7.60 -92.70 -0.70 -3.07 16 34 H 0.18 -1.25 7.45 -2.91 -0.02 -1.27 16 35 H 0.12 0.02 6.32 -2.39 -0.02 0.00 16 36 H 0.39 -0.77 7.07 -74.06 -0.52 -1.29 16 37 H -0.28 -1.82 7.11 99.48 0.71 -1.11 16 38 H -0.26 -1.52 7.11 99.48 0.71 -0.81 16 39 H 0.09 0.09 8.14 -2.38 -0.02 0.07 16 40 H 0.10 -0.29 6.66 -2.39 -0.02 -0.30 16 41 H 0.10 0.39 6.60 -2.39 -0.02 0.38 16 42 H 0.10 -0.44 7.72 -2.39 -0.02 -0.46 16 43 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 44 H 0.14 -0.53 6.66 -2.91 -0.02 -0.55 16 45 H 0.14 -0.49 8.06 -2.91 -0.02 -0.51 16 46 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 47 H 0.14 -0.28 6.30 -2.91 -0.02 -0.30 16 Total: 0.00 -17.54 397.77 0.12 -17.41 By element: Atomic # 1 Polarization: -11.59 SS G_CDS: -0.15 Total: -11.74 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: 5.66 Total: 8.76 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -3.98 Total: -5.09 kcal Atomic # 8 Polarization: -8.85 SS G_CDS: -2.85 Total: -11.70 kcal Atomic # 14 Polarization: 1.02 SS G_CDS: 2.04 Total: 3.07 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.60 Total: -0.70 kcal Total: -17.54 0.12 -17.41 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_5000100.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.123 kcal (2) G-P(sol) polarization free energy of solvation -17.536 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.414 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds