Wall clock time and date at job start Sun Mar 7 2021 05:10:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35898 * 116.99974 * 2 1 4 4 C 1.38707 * 120.05819 * 179.97438 * 3 2 1 5 5 C 1.50699 * 120.02531 * 0.02562 * 4 3 2 6 6 H 1.08997 * 112.90896 * 348.47216 * 5 4 3 7 7 C 1.53785 * 113.61297 * 119.72397 * 5 4 3 8 8 C 1.53783 * 87.08304 * 139.98048 * 7 5 4 9 9 H 1.08996 * 113.61492 * 219.93746 * 8 7 5 10 10 N 1.46502 * 113.61493 * 89.11344 * 8 7 5 11 11 C 1.34774 * 119.99647 * 155.00204 * 10 8 7 12 12 O 1.21278 * 120.00415 * 0.02562 * 11 10 8 13 13 C 1.50702 * 119.99764 * 179.97438 * 11 10 8 14 14 O 1.42902 * 109.46994 * 179.97438 * 13 11 10 15 15 C 1.35921 * 116.99614 * 180.02562 * 14 13 11 16 16 C 1.38790 * 120.05672 * 179.97438 * 15 14 13 17 17 Br 1.89101 * 120.03758 * 0.02562 * 16 15 14 18 18 C 1.38235 * 119.93111 * 180.02562 * 16 15 14 19 19 C 1.38248 * 120.04219 * 359.97438 * 18 16 15 20 20 C 1.50693 * 119.94191 * 179.97438 * 19 18 16 21 21 O 1.42907 * 109.47661 * 300.00763 * 20 19 18 22 22 Si 1.86298 * 109.47618 * 180.02562 * 20 19 18 23 23 C 1.38285 * 120.12000 * 0.28397 * 19 18 16 24 24 C 1.38147 * 120.06930 * 359.48249 * 23 19 18 25 25 C 1.53786 * 87.08117 * 334.56417 * 8 7 5 26 26 C 1.38166 * 119.94396 * 179.72484 * 4 3 2 27 27 C 1.38235 * 120.05754 * 0.27664 * 26 4 3 28 28 C 1.38293 * 120.11565 * 359.97438 * 27 26 4 29 29 C 1.38131 * 120.04738 * 359.97438 * 28 27 26 30 30 H 1.09003 * 109.46762 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47070 * 299.99786 * 1 2 3 32 32 H 1.08993 * 109.46833 * 60.00298 * 1 2 3 33 33 H 1.09002 * 113.61606 * 25.42976 * 7 5 4 34 34 H 1.09001 * 113.61303 * 254.52636 * 7 5 4 35 35 H 0.96998 * 119.99925 * 335.00167 * 10 8 7 36 36 H 1.09007 * 109.47059 * 60.00413 * 13 11 10 37 37 H 1.08998 * 109.47221 * 300.00589 * 13 11 10 38 38 H 1.07996 * 119.98159 * 180.02562 * 18 16 15 39 39 H 1.09000 * 109.46936 * 60.00386 * 20 19 18 40 40 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 41 41 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 42 42 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 43 43 H 1.07993 * 119.96394 * 179.74210 * 23 19 18 44 44 H 1.07994 * 120.02320 * 180.28014 * 24 23 19 45 45 H 1.08995 * 113.61470 * 139.97836 * 25 8 7 46 46 H 1.08991 * 113.61546 * 270.88640 * 25 8 7 47 47 H 1.08004 * 119.96780 * 180.25656 * 26 4 3 48 48 H 1.08001 * 119.94818 * 179.97438 * 27 26 4 49 49 H 1.07999 * 119.97667 * 179.97438 * 28 27 26 50 50 H 1.07999 * 120.02364 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2849 0.0005 5 6 4.2537 0.0222 0.0005 6 1 3.6610 -0.8703 0.2007 7 6 5.1758 -0.1123 -1.2228 8 6 6.2397 -0.6679 -0.2615 9 1 7.2481 -0.3129 -0.4738 10 7 6.1727 -2.1212 -0.0886 11 6 7.2727 -2.8073 0.2798 12 8 8.3178 -2.2217 0.4686 13 6 7.2037 -4.3022 0.4581 14 8 8.4874 -4.7952 0.8471 15 6 8.5983 -6.1346 1.0500 16 6 9.8162 -6.6817 1.4288 17 35 11.3237 -5.5645 1.6641 18 6 9.9263 -8.0443 1.6340 19 6 8.8243 -8.8613 1.4626 20 6 8.9469 -10.3464 1.6863 21 8 9.9197 -10.8848 0.7885 22 14 7.2996 -11.1594 1.3762 23 6 7.6111 -8.3188 1.0800 24 6 7.4946 -6.9572 0.8783 25 6 5.5299 0.1184 0.8533 26 6 4.0559 2.5172 -0.0052 27 6 3.3019 3.6758 -0.0057 28 6 1.9208 3.6048 -0.0010 29 6 1.2914 2.3753 0.0037 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 5.4487 0.8431 -1.6711 34 1 4.8263 -0.8401 -1.9551 35 1 5.3368 -2.5895 -0.2393 36 1 6.9060 -4.7669 -0.4819 37 1 6.4725 -4.5426 1.2299 38 1 10.8735 -8.4709 1.9292 39 1 9.2576 -10.5346 2.7140 40 1 10.0514 -11.8387 0.8770 41 1 6.2861 -10.6313 2.3246 42 1 6.8653 -10.9102 -0.0218 43 1 6.7529 -8.9599 0.9428 44 1 6.5457 -6.5338 0.5839 45 1 5.4661 -0.4232 1.7971 46 1 5.8995 1.1368 0.9727 47 1 5.1344 2.5752 -0.0090 48 1 3.7921 4.6381 -0.0098 49 1 1.3339 4.5114 -0.0010 50 1 0.2128 2.3203 0.0069 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_6201210.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:08 Heat of formation + Delta-G solvation = -40.800441 kcal Electronic energy + Delta-G solvation = -34037.157125 eV Core-core repulsion = 29237.570886 eV Total energy + Delta-G solvation = -4799.586238 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.74 seconds Orbital eigenvalues (eV) -41.94285 -41.58340 -40.80110 -39.64216 -38.90939 -38.04463 -37.26410 -34.76757 -33.76677 -32.21191 -31.94716 -31.06975 -30.62742 -29.65761 -28.15517 -26.72339 -26.49383 -25.97324 -24.23699 -23.19603 -22.69214 -22.36651 -21.87575 -20.20838 -19.70140 -19.12860 -18.54910 -18.28771 -17.64386 -17.57406 -17.27562 -16.92209 -16.75843 -16.67756 -16.63666 -15.94818 -15.82492 -15.66719 -15.39901 -15.37570 -15.13436 -14.85116 -14.71360 -14.37719 -14.19012 -14.12494 -13.97853 -13.90181 -13.59299 -13.49839 -13.17758 -13.01572 -12.78379 -12.64049 -12.33367 -12.31658 -12.22356 -12.04056 -12.02750 -11.90990 -11.78720 -11.67619 -11.28734 -11.19581 -11.08689 -10.32450 -10.21461 -10.08819 -9.78256 -9.42113 -9.09308 -4.90109 -0.22818 -0.01104 0.32472 0.46839 0.52411 1.29288 1.32877 1.36446 1.67997 1.96927 2.23388 2.35988 2.40244 2.74063 3.28763 3.38565 3.44305 3.53533 3.59503 3.64401 3.68138 3.83817 3.89785 3.92542 3.95582 3.96014 3.99611 4.08574 4.17518 4.21214 4.30642 4.35235 4.43357 4.44025 4.46895 4.53007 4.60876 4.68279 4.70716 4.71802 4.76454 4.80284 4.80596 4.91511 4.98220 5.08107 5.08621 5.13312 5.32377 5.38574 5.42542 5.57057 5.63396 5.83425 5.92395 6.36851 6.42132 6.92068 7.05629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.329 6.329 3 C 0.113 3.887 4 C -0.116 4.116 5 C -0.056 4.056 6 H 0.103 0.897 7 C -0.123 4.123 8 C 0.118 3.882 9 H 0.087 0.913 10 N -0.693 5.693 11 C 0.517 3.483 12 O -0.564 6.564 13 C 0.031 3.969 14 O -0.300 6.300 15 C 0.149 3.851 16 C -0.140 4.140 17 Br -0.043 7.043 18 C -0.030 4.030 19 C -0.119 4.119 20 C -0.080 4.080 21 O -0.566 6.566 22 Si 0.776 3.224 23 C -0.077 4.077 24 C -0.190 4.190 25 C -0.142 4.142 26 C -0.087 4.087 27 C -0.164 4.164 28 C -0.093 4.093 29 C -0.217 4.217 30 H 0.117 0.883 31 H 0.059 0.941 32 H 0.061 0.939 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.420 0.580 36 H 0.129 0.871 37 H 0.129 0.871 38 H 0.148 0.852 39 H 0.095 0.905 40 H 0.404 0.596 41 H -0.280 1.280 42 H -0.291 1.291 43 H 0.139 0.861 44 H 0.175 0.825 45 H 0.066 0.934 46 H 0.098 0.902 47 H 0.142 0.858 48 H 0.138 0.862 49 H 0.140 0.860 50 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.165 -4.889 -0.321 10.392 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.243 6.243 3 C 0.068 3.932 4 C -0.117 4.117 5 C -0.074 4.074 6 H 0.121 0.879 7 C -0.161 4.161 8 C 0.013 3.987 9 H 0.106 0.894 10 N -0.347 5.347 11 C 0.303 3.697 12 O -0.441 6.441 13 C -0.046 4.046 14 O -0.212 6.212 15 C 0.101 3.899 16 C -0.220 4.220 17 Br 0.042 6.958 18 C -0.049 4.049 19 C -0.121 4.121 20 C -0.190 4.190 21 O -0.376 6.376 22 Si 0.680 3.320 23 C -0.094 4.094 24 C -0.209 4.209 25 C -0.180 4.180 26 C -0.105 4.105 27 C -0.182 4.182 28 C -0.111 4.111 29 C -0.236 4.236 30 H 0.135 0.865 31 H 0.078 0.922 32 H 0.080 0.920 33 H 0.120 0.880 34 H 0.104 0.896 35 H 0.257 0.743 36 H 0.146 0.854 37 H 0.147 0.853 38 H 0.166 0.834 39 H 0.112 0.888 40 H 0.256 0.744 41 H -0.207 1.207 42 H -0.218 1.218 43 H 0.156 0.844 44 H 0.193 0.807 45 H 0.084 0.916 46 H 0.117 0.883 47 H 0.160 0.840 48 H 0.156 0.844 49 H 0.157 0.843 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -8.413 -3.362 -0.483 9.073 hybrid contribution -0.699 0.514 0.049 0.869 sum -9.112 -2.848 -0.434 9.557 Atomic orbital electron populations 1.23279 0.76925 1.05359 1.01900 1.86008 1.22843 1.26758 1.88708 1.19079 0.92254 0.84706 0.97155 1.19236 0.90302 0.95983 1.06158 1.21347 0.93600 0.95486 0.97012 0.87897 1.23378 0.94067 1.02518 0.96116 1.21836 0.99961 0.79463 0.97442 0.89444 1.45350 1.12476 1.07469 1.69362 1.20399 0.83725 0.89249 0.76350 1.90784 1.31365 1.71389 1.50572 1.22853 0.85185 0.91455 1.05141 1.86249 1.33258 1.18939 1.82794 1.18728 0.93270 0.83058 0.94861 1.21327 0.92262 0.94926 1.13506 1.96758 1.36486 1.66229 1.96281 1.20942 0.99807 0.89350 0.94843 1.19669 0.93444 0.95572 1.03379 1.24877 1.05383 0.91719 0.96973 1.86448 1.61087 1.29727 1.60347 0.94046 0.72231 0.88770 0.76933 1.21046 0.97060 0.95277 0.96062 1.21449 0.98933 0.93560 1.06978 1.23575 0.95354 1.01425 0.97679 1.21100 1.00813 0.90976 0.97604 1.21356 0.94182 0.99229 1.03406 1.21261 0.95151 0.97622 0.97091 1.21499 1.00921 0.92462 1.08726 0.86517 0.92209 0.92049 0.88011 0.89588 0.74258 0.85351 0.85293 0.83433 0.88769 0.74445 1.20688 1.21820 0.84402 0.80732 0.91551 0.88329 0.84034 0.84395 0.84251 0.84255 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.58 9.43 -92.40 -0.87 -1.45 16 3 C 0.11 0.35 6.66 22.51 0.15 0.50 16 4 C -0.12 -0.21 5.30 -19.77 -0.10 -0.32 16 5 C -0.06 0.07 3.74 -11.01 -0.04 0.03 16 6 H 0.10 -0.16 7.33 -2.39 -0.02 -0.17 16 7 C -0.12 0.38 7.29 31.12 0.23 0.61 16 8 C 0.12 -0.03 4.32 45.52 0.20 0.17 16 9 H 0.09 0.38 7.46 -2.39 -0.02 0.37 16 10 N -0.69 1.64 5.26 -440.03 -2.32 -0.67 16 11 C 0.52 2.10 7.91 87.66 0.69 2.79 16 12 O -0.56 -8.78 16.10 16.01 0.26 -8.52 16 13 C 0.03 -0.06 5.22 71.24 0.37 0.32 16 14 O -0.30 -2.31 9.01 -73.62 -0.66 -2.97 16 15 C 0.15 0.94 6.68 22.52 0.15 1.09 16 16 C -0.14 -1.23 6.24 22.40 0.14 -1.09 16 17 Br -0.04 -0.47 33.16 -20.37 -0.68 -1.15 16 18 C -0.03 -0.18 9.35 22.27 0.21 0.03 16 19 C -0.12 -0.43 5.42 -19.85 -0.11 -0.54 16 20 C -0.08 0.17 2.81 71.23 0.20 0.37 16 21 O -0.57 0.66 12.74 -148.98 -1.90 -1.24 16 22 Si 0.78 -3.76 29.78 68.60 2.04 -1.72 16 23 C -0.08 -0.15 8.66 22.26 0.19 0.04 16 24 C -0.19 -0.12 9.04 22.36 0.20 0.08 16 25 C -0.14 0.06 7.25 31.13 0.23 0.29 16 26 C -0.09 -0.05 8.61 22.25 0.19 0.14 16 27 C -0.16 -0.08 10.04 22.28 0.22 0.14 16 28 C -0.09 -0.06 10.04 22.26 0.22 0.16 16 29 C -0.22 -0.32 9.04 22.37 0.20 -0.12 16 30 H 0.12 -0.95 8.14 -2.39 -0.02 -0.97 16 31 H 0.06 -0.32 7.65 -2.39 -0.02 -0.34 16 32 H 0.06 -0.34 7.67 -2.39 -0.02 -0.36 16 33 H 0.10 -0.34 7.72 -2.39 -0.02 -0.36 16 34 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 35 H 0.42 -3.87 8.70 -92.71 -0.81 -4.68 16 36 H 0.13 -1.07 7.66 -2.38 -0.02 -1.08 16 37 H 0.13 -1.09 7.66 -2.39 -0.02 -1.11 16 38 H 0.15 0.67 8.06 -2.91 -0.02 0.65 16 39 H 0.09 -0.54 7.96 -2.39 -0.02 -0.56 16 40 H 0.40 -4.72 8.74 -74.06 -0.65 -5.37 16 41 H -0.28 0.16 7.11 99.48 0.71 0.87 16 42 H -0.29 -0.57 7.11 99.48 0.71 0.14 16 43 H 0.14 -0.12 4.87 -2.91 -0.01 -0.13 16 44 H 0.18 -1.30 6.30 -2.91 -0.02 -1.32 16 45 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 46 H 0.10 -0.10 6.31 -2.39 -0.02 -0.12 16 47 H 0.14 -0.38 6.66 -2.91 -0.02 -0.40 16 48 H 0.14 -0.41 8.06 -2.91 -0.02 -0.44 16 49 H 0.14 -0.46 8.06 -2.91 -0.02 -0.48 16 50 H 0.14 -0.30 6.30 -2.91 -0.02 -0.31 16 Total: 0.00 -28.66 430.75 0.13 -28.52 By element: Atomic # 1 Polarization: -16.11 SS G_CDS: -0.40 Total: -16.51 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: 4.66 Total: 5.72 kcal Atomic # 7 Polarization: 1.64 SS G_CDS: -2.32 Total: -0.67 kcal Atomic # 8 Polarization: -11.01 SS G_CDS: -3.17 Total: -14.19 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.04 Total: -1.72 kcal Atomic # 35 Polarization: -0.47 SS G_CDS: -0.68 Total: -1.15 kcal Total: -28.66 0.13 -28.52 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_6201210.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.275 kcal (2) G-P(sol) polarization free energy of solvation -28.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.134 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.525 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.800 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.74 seconds