Wall clock time and date at job start Sun Mar 7 2021 05:10:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 117.00305 * 2 1 4 4 C 1.38706 * 120.05422 * 180.02562 * 3 2 1 5 5 C 1.50701 * 120.03346 * 359.97438 * 4 3 2 6 6 H 1.09004 * 112.84340 * 348.52807 * 5 4 3 7 7 C 1.53777 * 113.61719 * 119.72107 * 5 4 3 8 8 C 1.53787 * 87.07931 * 140.06832 * 7 5 4 9 9 H 1.08997 * 113.61380 * 219.93769 * 8 7 5 10 10 N 1.46500 * 113.61224 * 89.11773 * 8 7 5 11 11 C 1.34771 * 119.99643 * 154.99939 * 10 8 7 12 12 O 1.21693 * 120.00192 * 359.97438 * 11 10 8 13 13 C 1.46680 * 119.99860 * 179.97438 * 11 10 8 14 14 C 1.37876 * 126.23468 * 179.68554 * 13 11 10 15 15 C 1.39831 * 107.08651 * 180.26342 * 14 13 11 16 16 C 1.35452 * 107.86497 * 0.02562 * 15 14 13 17 17 C 1.50707 * 125.56390 * 179.97438 * 16 15 14 18 18 O 1.42906 * 109.46508 * 120.02569 * 17 16 15 19 19 Si 1.86298 * 109.47182 * 0.02675 * 17 16 15 20 20 N 1.35531 * 108.87411 * 359.97438 * 16 15 14 21 21 C 1.53777 * 113.69301 * 217.26405 * 5 4 3 22 22 C 1.38173 * 119.94269 * 179.72485 * 4 3 2 23 23 C 1.38240 * 120.05293 * 0.22666 * 22 4 3 24 24 C 1.38291 * 120.11559 * 0.02655 * 23 22 4 25 25 C 1.38125 * 120.05293 * 359.97438 * 24 23 22 26 26 H 1.08997 * 109.47305 * 59.99778 * 1 2 3 27 27 H 1.08994 * 109.47083 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.46355 * 300.00016 * 1 2 3 29 29 H 1.09006 * 113.61023 * 25.52383 * 7 5 4 30 30 H 1.09001 * 113.61469 * 254.61526 * 7 5 4 31 31 H 0.97001 * 119.99717 * 334.99991 * 10 8 7 32 32 H 1.08000 * 126.45367 * 0.23398 * 14 13 11 33 33 H 1.08002 * 126.06745 * 179.97438 * 15 14 13 34 34 H 1.08997 * 109.46998 * 240.02330 * 17 16 15 35 35 H 0.96692 * 114.00239 * 299.99867 * 18 17 16 36 36 H 1.48494 * 110.00013 * 179.97438 * 19 17 16 37 37 H 1.48496 * 109.99835 * 301.32116 * 19 17 16 38 38 H 0.97004 * 125.68166 * 180.02562 * 20 16 15 39 39 H 1.08997 * 113.61506 * 105.45363 * 21 5 4 40 40 H 1.09001 * 113.61580 * 334.55118 * 21 5 4 41 41 H 1.07993 * 119.97318 * 180.25336 * 22 4 3 42 42 H 1.08002 * 119.94590 * 180.02562 * 23 22 4 43 43 H 1.08001 * 119.97394 * 179.97438 * 24 23 22 44 44 H 1.08003 * 120.02735 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2108 0.0000 4 6 3.4312 1.2847 -0.0005 5 6 4.2538 0.0220 -0.0005 6 1 3.6600 -0.8699 0.1997 7 6 5.1749 -0.1132 -1.2245 8 6 6.2387 -0.6705 -0.2639 9 1 7.2474 -0.3167 -0.4767 10 7 6.1700 -2.1237 -0.0916 11 6 7.2693 -2.8114 0.2759 12 8 8.3191 -2.2252 0.4641 13 6 7.2005 -4.2663 0.4489 14 6 8.2413 -5.0938 0.8136 15 6 7.7357 -6.3969 0.8528 16 6 6.4242 -6.3441 0.5183 17 6 5.4926 -7.5257 0.4351 18 8 4.4129 -7.3466 1.3540 19 14 6.4228 -9.0815 0.8653 20 7 6.0865 -5.0551 0.2708 21 6 5.5304 0.1162 0.8516 22 6 4.0561 2.5170 -0.0063 23 6 3.3021 3.6756 -0.0068 24 6 1.9210 3.6047 -0.0009 25 6 1.2915 2.3753 0.0048 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3632 0.5138 0.8900 29 1 5.4487 0.8421 -1.6724 30 1 4.8241 -0.8403 -1.9568 31 1 5.3333 -2.5909 -0.2420 32 1 9.2560 -4.7923 1.0280 33 1 8.2924 -7.2876 1.1043 34 1 5.0980 -7.6066 -0.5778 35 1 4.6909 -7.2669 2.2767 36 1 5.5149 -10.2540 0.7875 37 1 7.5673 -9.2621 -0.0633 38 1 5.2063 -4.7406 0.0113 39 1 5.4665 -0.4257 1.7952 40 1 5.9015 1.1341 0.9712 41 1 5.1345 2.5750 -0.0108 42 1 3.7924 4.6379 -0.0117 43 1 1.3342 4.5114 -0.0009 44 1 0.2129 2.3204 0.0090 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_6580494.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:19 Heat of formation + Delta-G solvation = -1.815724 kcal Electronic energy + Delta-G solvation = -27295.830924 eV Core-core repulsion = 23374.773233 eV Total energy + Delta-G solvation = -3921.057691 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.56624 -41.68684 -40.64044 -39.28084 -38.06912 -37.66276 -34.81075 -32.35566 -31.87240 -31.17622 -31.07286 -28.21046 -27.21459 -26.74508 -25.93921 -23.73257 -23.01392 -22.56400 -21.59108 -21.19034 -20.21454 -19.84911 -19.07874 -18.12747 -17.44528 -17.07561 -16.75352 -16.70596 -16.66884 -16.23820 -15.99849 -15.42033 -15.39528 -15.25037 -15.06389 -14.91410 -14.56450 -14.44290 -14.25660 -14.04180 -13.98431 -13.68030 -13.51687 -13.18828 -13.01535 -12.79966 -12.32416 -12.19811 -12.06517 -12.05252 -11.82081 -11.71030 -11.35962 -11.21045 -10.67221 -10.28814 -10.08355 -9.78999 -9.28410 -9.10213 -4.90164 0.27665 0.32201 0.46369 1.23343 1.53487 1.73102 1.88486 1.96874 2.20581 2.24235 2.34940 2.73598 3.40980 3.46892 3.58683 3.62721 3.64288 3.77263 3.88834 3.95885 4.06763 4.16435 4.25424 4.28933 4.31187 4.33397 4.42671 4.44187 4.45809 4.59423 4.67213 4.70044 4.74708 4.78133 4.87990 4.95619 4.96331 5.07334 5.09966 5.11564 5.37548 5.40136 5.55503 5.58745 5.62348 5.78988 5.83235 6.24989 6.41136 6.42264 6.67315 6.99872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.331 6.331 3 C 0.111 3.889 4 C -0.117 4.117 5 C -0.057 4.057 6 H 0.096 0.904 7 C -0.124 4.124 8 C 0.117 3.883 9 H 0.094 0.906 10 N -0.701 5.701 11 C 0.591 3.409 12 O -0.568 6.568 13 C -0.066 4.066 14 C -0.115 4.115 15 C -0.205 4.205 16 C 0.030 3.970 17 C -0.056 4.056 18 O -0.555 6.555 19 Si 0.805 3.195 20 N -0.513 5.513 21 C -0.139 4.139 22 C -0.086 4.086 23 C -0.162 4.162 24 C -0.093 4.093 25 C -0.217 4.217 26 H 0.061 0.939 27 H 0.115 0.885 28 H 0.060 0.940 29 H 0.106 0.894 30 H 0.080 0.920 31 H 0.407 0.593 32 H 0.147 0.853 33 H 0.169 0.831 34 H 0.116 0.884 35 H 0.399 0.601 36 H -0.295 1.295 37 H -0.285 1.285 38 H 0.426 0.574 39 H 0.064 0.936 40 H 0.103 0.897 41 H 0.144 0.856 42 H 0.140 0.860 43 H 0.140 0.860 44 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.728 -0.565 0.922 4.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.245 6.245 3 C 0.066 3.934 4 C -0.118 4.118 5 C -0.075 4.075 6 H 0.115 0.885 7 C -0.162 4.162 8 C 0.012 3.988 9 H 0.112 0.888 10 N -0.351 5.351 11 C 0.380 3.620 12 O -0.447 6.447 13 C -0.180 4.180 14 C -0.142 4.142 15 C -0.229 4.229 16 C -0.089 4.089 17 C -0.165 4.165 18 O -0.363 6.363 19 Si 0.709 3.291 20 N -0.110 5.110 21 C -0.178 4.178 22 C -0.104 4.104 23 C -0.180 4.180 24 C -0.111 4.111 25 C -0.236 4.236 26 H 0.080 0.920 27 H 0.133 0.867 28 H 0.079 0.921 29 H 0.124 0.876 30 H 0.098 0.902 31 H 0.243 0.757 32 H 0.165 0.835 33 H 0.187 0.813 34 H 0.133 0.867 35 H 0.249 0.751 36 H -0.223 1.223 37 H -0.211 1.211 38 H 0.266 0.734 39 H 0.083 0.917 40 H 0.122 0.878 41 H 0.162 0.838 42 H 0.158 0.842 43 H 0.158 0.842 44 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -4.158 -1.028 0.188 4.288 hybrid contribution -1.331 0.719 -0.660 1.651 sum -5.490 -0.309 -0.472 5.519 Atomic orbital electron populations 1.23273 0.76931 1.05291 1.01953 1.86010 1.22857 1.26880 1.88739 1.19102 0.92295 0.84713 0.97261 1.19230 0.90273 0.95961 1.06290 1.21313 0.93696 0.95394 0.97112 0.88534 1.23394 0.94218 1.02552 0.96041 1.21884 1.00270 0.79174 0.97467 0.88763 1.45458 1.12154 1.07894 1.69600 1.17234 0.83597 0.85137 0.75996 1.90840 1.30869 1.70030 1.52916 1.20290 0.89343 0.90451 1.17876 1.21501 0.98572 0.92499 1.01613 1.20947 0.93682 0.98216 1.10053 1.21372 0.96265 0.85634 1.05674 1.25082 0.92232 1.02132 0.97081 1.86473 1.32275 1.95873 1.21645 0.92944 0.75876 0.71103 0.89144 1.41907 1.10876 1.06217 1.52043 1.23567 0.95138 1.01570 0.97521 1.21109 1.00900 0.90851 0.97504 1.21369 0.94137 0.99259 1.03284 1.21270 0.95206 0.97581 0.97031 1.21493 1.00902 0.92447 1.08724 0.92012 0.86667 0.92114 0.87593 0.90159 0.75670 0.83502 0.81331 0.86671 0.75067 1.22294 1.21126 0.73421 0.91706 0.87831 0.83824 0.84214 0.84172 0.84274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.33 -0.93 9.43 -92.41 -0.87 -1.80 16 3 C 0.11 0.42 6.66 22.51 0.15 0.57 16 4 C -0.12 -0.29 5.30 -19.77 -0.10 -0.39 16 5 C -0.06 0.01 3.74 -11.02 -0.04 -0.03 16 6 H 0.10 0.05 7.33 -2.38 -0.02 0.03 16 7 C -0.12 0.24 7.29 31.12 0.23 0.47 16 8 C 0.12 0.11 4.32 45.52 0.20 0.30 16 9 H 0.09 0.41 7.46 -2.39 -0.02 0.39 16 10 N -0.70 -0.55 5.26 -444.00 -2.33 -2.88 16 11 C 0.59 4.19 7.79 86.45 0.67 4.87 16 12 O -0.57 -8.67 16.48 -4.33 -0.07 -8.74 16 13 C -0.07 -0.27 7.06 40.35 0.28 0.02 16 14 C -0.11 -0.51 10.65 22.57 0.24 -0.27 16 15 C -0.21 0.05 9.32 22.01 0.21 0.25 16 16 C 0.03 -0.05 6.47 41.35 0.27 0.22 16 17 C -0.06 0.23 3.08 71.24 0.22 0.45 16 18 O -0.55 2.23 12.88 -148.98 -1.92 0.32 16 19 Si 0.81 -4.03 30.54 68.60 2.10 -1.93 16 20 N -0.51 0.76 5.99 -171.92 -1.03 -0.27 16 21 C -0.14 -0.03 7.26 31.12 0.23 0.19 16 22 C -0.09 -0.05 8.61 22.25 0.19 0.14 16 23 C -0.16 -0.06 10.04 22.28 0.22 0.17 16 24 C -0.09 -0.06 10.04 22.26 0.22 0.16 16 25 C -0.22 -0.40 9.04 22.37 0.20 -0.20 16 26 H 0.06 -0.30 7.67 -2.39 -0.02 -0.32 16 27 H 0.12 -0.80 8.14 -2.39 -0.02 -0.82 16 28 H 0.06 -0.28 7.65 -2.39 -0.02 -0.30 16 29 H 0.11 -0.31 7.72 -2.38 -0.02 -0.33 16 30 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.41 -1.77 7.83 -92.71 -0.73 -2.50 16 32 H 0.15 0.72 8.06 -2.91 -0.02 0.70 16 33 H 0.17 -0.80 6.17 -2.91 -0.02 -0.82 16 34 H 0.12 -0.47 7.96 -2.39 -0.02 -0.49 16 35 H 0.40 -4.44 8.70 -74.06 -0.64 -5.08 16 36 H -0.30 -0.62 7.11 99.48 0.71 0.09 16 37 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 38 H 0.43 -2.57 8.19 -92.71 -0.76 -3.33 16 39 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 40 H 0.10 -0.13 6.32 -2.39 -0.02 -0.15 16 41 H 0.14 -0.44 6.66 -2.91 -0.02 -0.46 16 42 H 0.14 -0.47 8.06 -2.91 -0.02 -0.50 16 43 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 44 H 0.14 -0.24 6.30 -2.91 -0.02 -0.26 16 Total: 0.00 -20.85 365.86 -0.66 -21.51 By element: Atomic # 1 Polarization: -13.12 SS G_CDS: -1.02 Total: -14.15 kcal Atomic # 6 Polarization: 3.45 SS G_CDS: 4.50 Total: 7.95 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -3.36 Total: -3.15 kcal Atomic # 8 Polarization: -7.37 SS G_CDS: -2.86 Total: -10.23 kcal Atomic # 14 Polarization: -4.03 SS G_CDS: 2.10 Total: -1.93 kcal Total: -20.85 -0.66 -21.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_6580494.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.697 kcal (2) G-P(sol) polarization free energy of solvation -20.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.158 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.513 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds