Wall clock time and date at job start Sun Mar 7 2021 05:10:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35894 * 117.00204 * 2 1 4 4 C 1.38713 * 120.05802 * 180.23533 * 3 2 1 5 5 C 1.50696 * 120.02563 * 0.02562 * 4 3 2 6 6 H 1.09000 * 112.85429 * 349.05312 * 5 4 3 7 7 C 1.53779 * 113.61374 * 120.25567 * 5 4 3 8 8 C 1.53782 * 87.08481 * 139.97760 * 7 5 4 9 9 H 1.08995 * 113.61954 * 220.02120 * 8 7 5 10 10 N 1.46498 * 113.61376 * 89.11338 * 8 7 5 11 11 C 1.34771 * 120.00235 * 155.00429 * 10 8 7 12 12 O 1.21706 * 120.00149 * 359.97438 * 11 10 8 13 13 C 1.46591 * 120.00325 * 180.02562 * 11 10 8 14 14 C 1.36648 * 125.45843 * 179.97438 * 13 11 10 15 15 C 1.37467 * 113.29545 * 179.97438 * 14 13 11 16 16 C 1.50706 * 122.44952 * 179.97438 * 15 14 13 17 17 C 1.33816 * 115.10234 * 0.02562 * 15 14 13 18 18 C 1.50697 * 124.52201 * 179.97438 * 17 15 14 19 19 O 1.42900 * 109.47493 * 246.71538 * 18 17 15 20 20 Si 1.86305 * 109.47099 * 126.71552 * 18 17 15 21 21 S 1.70622 * 110.95490 * 359.75768 * 17 15 14 22 22 C 1.53784 * 113.61352 * 217.75144 * 5 4 3 23 23 C 1.38163 * 119.94219 * 180.27405 * 4 3 2 24 24 C 1.38244 * 120.05837 * 359.47193 * 23 4 3 25 25 C 1.38286 * 120.11187 * 0.29838 * 24 23 4 26 26 C 1.38129 * 120.05579 * 359.95428 * 25 24 23 27 27 H 1.09003 * 109.46914 * 299.99451 * 1 2 3 28 28 H 1.09005 * 109.47319 * 59.99675 * 1 2 3 29 29 H 1.08998 * 109.47272 * 179.97438 * 1 2 3 30 30 H 1.09000 * 113.61551 * 254.52676 * 7 5 4 31 31 H 1.09001 * 113.61671 * 25.42661 * 7 5 4 32 32 H 0.97002 * 120.00128 * 335.00100 * 10 8 7 33 33 H 1.08001 * 123.35193 * 359.94402 * 14 13 11 34 34 H 1.08996 * 109.47175 * 95.15001 * 16 15 14 35 35 H 1.08995 * 109.46809 * 215.15436 * 16 15 14 36 36 H 1.09003 * 109.46712 * 335.14626 * 16 15 14 37 37 H 1.08999 * 109.47402 * 6.71911 * 18 17 15 38 38 H 0.96703 * 113.99641 * 300.00499 * 19 18 17 39 39 H 1.48493 * 110.00167 * 180.02562 * 20 18 17 40 40 H 1.48495 * 110.00037 * 301.32110 * 20 18 17 41 41 H 1.09001 * 113.61233 * 334.56458 * 22 5 4 42 42 H 1.09000 * 113.61775 * 105.46938 * 22 5 4 43 43 H 1.07998 * 119.96986 * 179.74400 * 23 4 3 44 44 H 1.07997 * 119.94548 * 180.27103 * 24 23 4 45 45 H 1.08001 * 119.97457 * 179.97438 * 25 24 23 46 46 H 1.08002 * 120.02756 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2848 -0.0049 5 6 4.2537 0.0221 -0.0109 6 1 3.6592 -0.8713 0.1800 7 6 5.1803 -0.1037 -1.2317 8 6 6.2407 -0.6663 -0.2704 9 1 7.2497 -0.3087 -0.4755 10 7 6.1730 -2.1207 -0.1081 11 6 7.2715 -2.8095 0.2594 12 8 8.3199 -2.2235 0.4561 13 6 7.2040 -4.2649 0.4213 14 6 8.2448 -5.0709 0.7879 15 6 7.9025 -6.4001 0.8642 16 6 8.8922 -7.4692 1.2496 17 6 6.6264 -6.6754 0.5701 18 6 6.0253 -8.0572 0.5858 19 8 5.6708 -8.4377 -0.7452 20 14 4.5023 -8.0598 1.6588 21 16 5.7692 -5.2524 0.1809 22 6 5.5266 0.1121 0.8473 23 6 4.0560 2.5170 0.0008 24 6 3.3020 3.6757 0.0004 25 6 1.9209 3.6047 0.0005 26 6 1.2914 2.3753 0.0001 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 4.8335 -0.8263 -1.9705 31 1 5.4549 0.8548 -1.6721 32 1 5.3376 -2.5879 -0.2652 33 1 9.2377 -4.7005 0.9965 34 1 8.8129 -7.6696 2.3180 35 1 8.6778 -8.3808 0.6920 36 1 9.9019 -7.1303 1.0173 37 1 6.7519 -8.7650 0.9847 38 1 5.0261 -7.8507 -1.1635 39 1 3.9004 -9.4170 1.6831 40 1 4.8520 -7.6350 3.0381 41 1 5.8959 1.1296 0.9753 42 1 5.4594 -0.4362 1.7870 43 1 5.1344 2.5751 0.0012 44 1 3.7923 4.6380 0.0005 45 1 1.3340 4.5114 0.0007 46 1 0.2128 2.3204 -0.0003 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15784314_6739946.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:10:28 Heat of formation + Delta-G solvation = -20.040124 kcal Electronic energy + Delta-G solvation = -28947.398747 eV Core-core repulsion = 24896.365185 eV Total energy + Delta-G solvation = -4051.033562 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.76474 -40.86472 -39.96512 -39.14073 -38.05936 -37.56516 -34.61106 -32.58023 -31.70571 -31.07018 -29.90821 -28.29521 -27.21739 -26.72489 -25.81772 -24.38189 -23.13862 -22.59313 -21.89069 -20.38594 -19.93676 -19.52392 -19.02926 -17.83851 -17.45709 -17.37981 -16.97447 -16.71036 -16.61272 -16.19130 -16.02395 -15.77059 -15.43360 -15.35806 -15.14802 -14.85717 -14.83545 -14.39101 -14.30862 -14.17598 -14.03406 -13.53817 -13.51892 -13.22837 -13.18187 -13.06422 -12.99478 -12.82940 -12.46179 -12.31786 -12.21991 -12.08818 -11.97264 -11.76145 -11.67935 -11.17530 -11.07006 -10.81197 -10.14598 -9.76617 -9.69345 -9.48388 -9.06463 -5.25129 -0.64501 0.29089 0.34884 0.50319 0.69224 1.03875 1.26824 1.54831 1.83781 1.99870 2.17562 2.30775 2.76536 3.24457 3.44284 3.49480 3.64353 3.65358 3.75074 3.87537 3.96277 4.04824 4.06975 4.12936 4.14576 4.18699 4.19768 4.36897 4.41339 4.43001 4.43803 4.53753 4.61885 4.63835 4.68249 4.73104 4.75395 4.85508 4.91108 4.94890 5.00658 5.07350 5.14748 5.23150 5.34685 5.39941 5.45579 5.58485 5.65316 5.82262 6.32400 6.38181 6.41924 7.11973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.103 4.103 5 C -0.064 4.064 6 H 0.103 0.897 7 C -0.135 4.135 8 C 0.120 3.880 9 H 0.108 0.892 10 N -0.708 5.708 11 C 0.596 3.404 12 O -0.523 6.523 13 C -0.259 4.259 14 C -0.045 4.045 15 C -0.097 4.097 16 C -0.102 4.102 17 C -0.232 4.232 18 C -0.034 4.034 19 O -0.532 6.532 20 Si 0.676 3.324 21 S 0.203 5.797 22 C -0.145 4.145 23 C -0.080 4.080 24 C -0.154 4.154 25 C -0.084 4.084 26 C -0.207 4.207 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.101 0.899 30 H 0.077 0.923 31 H 0.099 0.901 32 H 0.399 0.601 33 H 0.157 0.843 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.074 0.926 37 H 0.128 0.872 38 H 0.378 0.622 39 H -0.240 1.240 40 H -0.248 1.248 41 H 0.096 0.904 42 H 0.075 0.925 43 H 0.130 0.870 44 H 0.124 0.876 45 H 0.124 0.876 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.620 0.929 -0.948 5.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.082 4.082 6 H 0.121 0.879 7 C -0.173 4.173 8 C 0.015 3.985 9 H 0.126 0.874 10 N -0.359 5.359 11 C 0.382 3.618 12 O -0.400 6.400 13 C -0.379 4.379 14 C -0.078 4.078 15 C -0.110 4.110 16 C -0.161 4.161 17 C -0.351 4.351 18 C -0.146 4.146 19 O -0.338 6.338 20 Si 0.575 3.425 21 S 0.472 5.528 22 C -0.183 4.183 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.102 4.102 26 C -0.226 4.226 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.120 0.880 30 H 0.095 0.905 31 H 0.118 0.882 32 H 0.234 0.766 33 H 0.174 0.826 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.145 0.855 38 H 0.225 0.775 39 H -0.164 1.164 40 H -0.172 1.172 41 H 0.115 0.885 42 H 0.093 0.907 43 H 0.148 0.852 44 H 0.142 0.858 45 H 0.142 0.858 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -6.288 0.657 -0.392 6.335 hybrid contribution 1.280 -0.357 0.329 1.369 sum -5.008 0.300 -0.063 5.017 Atomic orbital electron populations 1.23084 0.78209 1.04152 1.01415 1.86042 1.21411 1.26766 1.88618 1.18857 0.91796 0.84281 0.96583 1.19021 0.90111 0.95314 1.05905 1.21414 0.94010 0.95945 0.96844 0.87922 1.23446 0.95190 1.02267 0.96436 1.21881 1.00715 0.79081 0.96813 0.87359 1.45513 1.12354 1.07669 1.70409 1.16902 0.83786 0.84627 0.76498 1.90862 1.29358 1.69549 1.50240 1.24489 0.99010 0.97219 1.17162 1.20700 0.99885 0.91233 0.95987 1.18694 0.94113 0.95248 1.02972 1.20622 0.97413 0.96274 1.01758 1.24454 0.99063 1.01339 1.10290 1.24642 1.06945 0.91296 0.91716 1.86575 1.65386 1.54802 1.26988 0.95126 0.80585 0.86090 0.80725 1.82646 1.10744 0.94881 1.64561 1.23600 0.95181 1.01403 0.98148 1.20882 1.00063 0.91017 0.97840 1.21082 0.93939 0.98520 1.03683 1.20980 0.94788 0.97056 0.97339 1.21267 1.00118 0.92425 1.08752 0.92624 0.92602 0.88039 0.90454 0.88246 0.76580 0.82584 0.90849 0.90939 0.90742 0.85513 0.77507 1.16359 1.17152 0.88547 0.90668 0.85212 0.85768 0.85780 0.85466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.25 9.43 -19.41 -0.18 -0.43 16 3 C 0.13 0.18 6.66 -39.21 -0.26 -0.08 16 4 C -0.10 -0.08 5.30 -104.48 -0.55 -0.64 16 5 C -0.06 0.03 3.75 -90.96 -0.34 -0.31 16 6 H 0.10 -0.03 7.32 -51.93 -0.38 -0.41 16 7 C -0.14 0.17 7.29 -25.92 -0.19 -0.02 16 8 C 0.12 -0.01 4.32 -67.12 -0.29 -0.30 16 9 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 10 N -0.71 -0.13 5.26 -54.35 -0.29 -0.42 16 11 C 0.60 1.72 7.78 -12.89 -0.10 1.62 16 12 O -0.52 -3.39 16.44 5.18 0.09 -3.31 16 13 C -0.26 -0.40 6.45 -36.79 -0.24 -0.64 16 14 C -0.04 -0.08 9.78 -40.44 -0.40 -0.48 16 15 C -0.10 -0.09 5.78 -106.45 -0.62 -0.70 16 16 C -0.10 0.06 9.48 36.01 0.34 0.40 16 17 C -0.23 0.01 4.83 -35.86 -0.17 -0.17 16 18 C -0.03 0.02 2.77 36.00 0.10 0.12 16 19 O -0.53 0.15 12.88 -35.23 -0.45 -0.31 16 20 Si 0.68 -0.90 32.12 -169.99 -5.46 -6.36 16 21 S 0.20 -0.29 20.82 -107.50 -2.24 -2.53 16 22 C -0.14 0.05 7.25 -25.92 -0.19 -0.14 16 23 C -0.08 -0.01 8.61 -39.61 -0.34 -0.35 16 24 C -0.15 -0.03 10.04 -39.56 -0.40 -0.42 16 25 C -0.08 -0.02 10.04 -39.60 -0.40 -0.42 16 26 C -0.21 -0.13 9.04 -39.43 -0.36 -0.48 16 27 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.10 -0.17 7.72 -51.93 -0.40 -0.57 16 32 H 0.40 -0.76 7.81 -40.82 -0.32 -1.08 16 33 H 0.16 0.25 8.06 -52.49 -0.42 -0.17 16 34 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 35 H 0.07 -0.05 6.99 -51.93 -0.36 -0.42 16 36 H 0.07 -0.08 8.10 -51.93 -0.42 -0.50 16 37 H 0.13 -0.08 6.25 -51.93 -0.32 -0.40 16 38 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 39 H -0.24 -0.30 7.11 56.52 0.40 0.10 16 40 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 41 H 0.10 -0.10 6.31 -51.93 -0.33 -0.42 16 42 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 43 H 0.13 -0.20 6.66 -52.49 -0.35 -0.55 16 44 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 45 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 46 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 LS Contribution 391.85 15.07 5.91 5.91 Total: 0.00 -8.10 391.85 -12.20 -20.30 By element: Atomic # 1 Polarization: -4.62 SS G_CDS: -6.16 Total: -10.78 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -3.40 Total: -2.06 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.29 Total: -0.42 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.55 Total: -4.05 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.46 Total: -6.36 kcal Atomic # 16 Polarization: -0.29 SS G_CDS: -2.24 Total: -2.53 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -8.10 -12.20 -20.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_6739946.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.256 kcal (2) G-P(sol) polarization free energy of solvation -8.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.296 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds